RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 SLC30A4O14863 429 aa21.48■■□□□ 1.03
PTPRU-203ENST00000415600 KLF8O95600 359 aaPredicted RBP21.48■■□□□ 1.03
PTPRU-203ENST00000415600 TBX18O95935 607 aa21.48■■□□□ 1.03
PTPRU-203ENST00000415600 COG7P83436 770 aa21.48■■□□□ 1.03
PTPRU-203ENST00000415600 CUL2Q13617 745 aa21.48■■□□□ 1.03
PTPRU-203ENST00000415600 FILIP1LQ4L180 1135 aa21.48■■□□□ 1.03
PTPRU-203ENST00000415600 GRAMD4Q6IC98 578 aa21.48■■□□□ 1.03
PTPRU-203ENST00000415600 SDE2Q6IQ49 451 aa21.48■■□□□ 1.03
PTPRU-203ENST00000415600 TTC30AQ86WT1 665 aa21.48■■□□□ 1.03
PTPRU-203ENST00000415600 ALLCQ8N6M5 410 aa21.48■■□□□ 1.03
PTPRU-203ENST00000415600 ANKRD52Q8NB46 1076 aa21.48■■□□□ 1.03
PTPRU-203ENST00000415600 TXNDC5Q8NBS9 432 aaKnown RBP21.48■■□□□ 1.03
PTPRU-203ENST00000415600 BBS2Q9BXC9 721 aa21.48■■□□□ 1.03
PTPRU-203ENST00000415600 DCLK3Q9C098 648 aa21.48■■□□□ 1.03
PTPRU-203ENST00000415600 VPS45Q9NRW7 570 aa21.48■■□□□ 1.03
PTPRU-203ENST00000415600 POLR3BQ9NW08 1133 aaPredicted RBP21.48■■□□□ 1.03
PTPRU-203ENST00000415600 BCCIPQ9P287 314 aaKnown RBP eCLIP21.48■■□□□ 1.03
PTPRU-203ENST00000415600 STRIP2Q9ULQ0 834 aa21.48■■□□□ 1.03
PTPRU-203ENST00000415600 KCNJ18B7U540 433 aa21.48■■□□□ 1.03
PTPRU-203ENST00000415600 TULP3O75386 442 aa21.48■■□□□ 1.03
PTPRU-203ENST00000415600 RAD23BP54727 409 aa21.48■■□□□ 1.03
PTPRU-203ENST00000415600 KCNJ12Q14500 433 aa21.48■■□□□ 1.03
PTPRU-203ENST00000415600 KRT31Q15323 416 aa21.48■■□□□ 1.03
PTPRU-203ENST00000415600 CCDC40Q4G0X9 1142 aa21.48■■□□□ 1.03
PTPRU-203ENST00000415600 TCP11X2Q5H9J9 407 aa21.48■■□□□ 1.03
PTPRU-203ENST00000415600 IL31Q6EBC2 164 aa21.48■■□□□ 1.03
PTPRU-203ENST00000415600 RSRC2Q7L4I2 434 aaKnown RBP21.48■■□□□ 1.03
PTPRU-203ENST00000415600 RASSF3Q86WH2 238 aa21.48■■□□□ 1.03
PTPRU-203ENST00000415600 C12orf40Q86WS4 652 aa21.48■■□□□ 1.03
PTPRU-203ENST00000415600 IRF2BP1Q8IU81 584 aa21.48■■□□□ 1.03
PTPRU-203ENST00000415600 ETFBKMTQ8IXQ9 262 aa21.48■■□□□ 1.03
PTPRU-203ENST00000415600 NAT16Q8N8M0 369 aa21.48■■□□□ 1.03
PTPRU-203ENST00000415600 IL17RCQ8NAC3 791 aa21.48■■□□□ 1.03
PTPRU-203ENST00000415600 SLC4A11Q8NBS3 891 aa21.48■■□□□ 1.03
PTPRU-203ENST00000415600 RTN4Q9NQC3 1192 aaKnown RBP21.48■■□□□ 1.03
PTPRU-203ENST00000415600 KIAA1257Q9ULG3 409 aa21.48■■□□□ 1.03
PTPRU-203ENST00000415600 USP3Q9Y6I4 520 aa21.48■■□□□ 1.03
PTPRU-203ENST00000415600 NEDD8-MDP1E9PL57 170 aa21.47■■□□□ 1.03
PTPRU-203ENST00000415600 EEF1GP26641 437 aaKnown RBP21.47■■□□□ 1.03
PTPRU-203ENST00000415600 HOXC13P31276 330 aa21.47■■□□□ 1.03
PTPRU-203ENST00000415600 MPLP40238 635 aa21.47■■□□□ 1.03
PTPRU-203ENST00000415600 BCAT1P54687 386 aa21.47■■□□□ 1.03
PTPRU-203ENST00000415600 LRMPQ12912 555 aa21.47■■□□□ 1.03
PTPRU-203ENST00000415600 E2F5Q15329 346 aa21.47■■□□□ 1.03
PTPRU-203ENST00000415600 CBWD6Q4V339 395 aa21.47■■□□□ 1.03
PTPRU-203ENST00000415600 SGO2Q562F6 1265 aa21.47■■□□□ 1.03
PTPRU-203ENST00000415600 CBWD3Q5JTY5 395 aa21.47■■□□□ 1.03
PTPRU-203ENST00000415600 CBWD5Q5RIA9 395 aa21.47■■□□□ 1.03
PTPRU-203ENST00000415600 C10orf76Q5T2E6 689 aa21.47■■□□□ 1.03
PTPRU-203ENST00000415600 TMEM25Q86YD3 366 aa21.47■■□□□ 1.03
PTPRU-203ENST00000415600 ZNF513Q8N8E2 541 aaPredicted RBP21.47■■□□□ 1.03
PTPRU-203ENST00000415600 TERB1Q8NA31 727 aa21.47■■□□□ 1.03
PTPRU-203ENST00000415600 DNAJC17Q9NVM6 304 aaKnown RBP21.47■■□□□ 1.03
PTPRU-203ENST00000415600 MARK1Q9P0L2 795 aa21.47■■□□□ 1.03
PTPRU-203ENST00000415600 CHKAP35790 457 aa21.46■■□□□ 1.03
PTPRU-203ENST00000415600 ARID5BQ14865 1188 aa21.46■■□□□ 1.03
PTPRU-203ENST00000415600 KIAA1524Q8TCG1 905 aa21.46■■□□□ 1.03
PTPRU-203ENST00000415600 TATDN2Q93075 761 aa21.46■■□□□ 1.03
PTPRU-203ENST00000415600 SRRTQ9BXP5 876 aaKnown RBP21.46■■□□□ 1.03
PTPRU-203ENST00000415600 DUSP15Q9H1R2 295 aaPredicted RBP21.46■■□□□ 1.03
PTPRU-203ENST00000415600 NMUR1Q9HB89 426 aa21.46■■□□□ 1.03
PTPRU-203ENST00000415600 OSER1Q9NX31 292 aa21.46■■□□□ 1.03
PTPRU-203ENST00000415600 PYCARDQ9ULZ3 195 aa21.46■■□□□ 1.03
PTPRU-203ENST00000415600 CACNG3O60359 315 aa21.45■■□□□ 1.02
PTPRU-203ENST00000415600 TYRP14679 529 aa21.45■■□□□ 1.02
PTPRU-203ENST00000415600 CD19P15391 556 aa21.45■■□□□ 1.02
PTPRU-203ENST00000415600 KIR2DL1P43626 348 aaPredicted RBP21.45■■□□□ 1.02
PTPRU-203ENST00000415600 COPB1P53618 953 aaKnown RBP21.45■■□□□ 1.02
PTPRU-203ENST00000415600 LIMK1P53667 647 aa21.45■■□□□ 1.02
PTPRU-203ENST00000415600 CREB5Q02930 508 aa21.45■■□□□ 1.02
PTPRU-203ENST00000415600 TBX2Q13207 712 aaPredicted RBP21.45■■□□□ 1.02
PTPRU-203ENST00000415600 SPECC1LQ69YQ0 1117 aa21.45■■□□□ 1.02
PTPRU-203ENST00000415600 PIGZQ86VD9 579 aa21.45■■□□□ 1.02
PTPRU-203ENST00000415600 MIB1Q86YT6 1006 aa21.45■■□□□ 1.02
PTPRU-203ENST00000415600 FAM114A1Q8IWE2 563 aa21.45■■□□□ 1.02
PTPRU-203ENST00000415600 PGBD3Q8N328 593 aa21.45■■□□□ 1.02
PTPRU-203ENST00000415600 SLC35C1Q96A29 364 aa21.45■■□□□ 1.02
PTPRU-203ENST00000415600 ARID3AQ99856 593 aa21.45■■□□□ 1.02
PTPRU-203ENST00000415600 LRRC4Q9HBW1 653 aa21.45■■□□□ 1.02
PTPRU-203ENST00000415600 MYO16Q9Y6X6 1858 aa21.45■■□□□ 1.02
PTPRU-203ENST00000415600 DNAH14Q0VDD8 3507 aa21.45■■□□□ 1.02
PTPRU-203ENST00000415600 MAP3K13O43283 966 aa21.44■■□□□ 1.02
PTPRU-203ENST00000415600 GNA14O95837 355 aa21.44■■□□□ 1.02
PTPRU-203ENST00000415600 PBX1P40424 430 aa21.44■■□□□ 1.02
PTPRU-203ENST00000415600 PGFP49763 221 aa21.44■■□□□ 1.02
PTPRU-203ENST00000415600 TPGS1Q6ZTW0 290 aa21.44■■□□□ 1.02
PTPRU-203ENST00000415600 MDGA1Q8NFP4 955 aa21.44■■□□□ 1.02
PTPRU-203ENST00000415600 NT5C1BQ96P26 610 aa21.44■■□□□ 1.02
PTPRU-203ENST00000415600 TPSD1Q9BZJ3 242 aa21.44■■□□□ 1.02
PTPRU-203ENST00000415600 OLA1Q9NTK5 396 aaKnown RBP21.44■■□□□ 1.02
PTPRU-203ENST00000415600 RASAL2Q9UJF2 1139 aa21.44■■□□□ 1.02
PTPRU-203ENST00000415600 STARD13Q9Y3M8 1113 aa21.44■■□□□ 1.02
PTPRU-203ENST00000415600 MED19A0JLT2 244 aaPredicted RBP21.44■■□□□ 1.02
PTPRU-203ENST00000415600 DCDC2BA2VCK2 349 aa21.44■■□□□ 1.02
PTPRU-203ENST00000415600 SGK1O00141 431 aa21.44■■□□□ 1.02
PTPRU-203ENST00000415600 XPO1O14980 1071 aaKnown RBP21.44■■□□□ 1.02
PTPRU-203ENST00000415600 PMM2O15305 246 aa21.44■■□□□ 1.02
PTPRU-203ENST00000415600 P4HA2O15460 535 aa21.44■■□□□ 1.02
PTPRU-203ENST00000415600 ZBED1O96006 694 aa21.44■■□□□ 1.02
PTPRU-203ENST00000415600 DPP6P42658 865 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms