RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 PEX5P50542 639 aa16.18■□□□□ 0.18
SHMT2-202ENST00000414700 HDAC4P56524 1084 aa16.18■□□□□ 0.18
SHMT2-202ENST00000414700 AADACL2Q6P093 401 aa16.18■□□□□ 0.18
SHMT2-202ENST00000414700 FAM76AQ8TAV0 307 aa16.18■□□□□ 0.18
SHMT2-202ENST00000414700 FBXO32Q969P5 355 aa16.18■□□□□ 0.18
SHMT2-202ENST00000414700 NT5C3BQ969T7 300 aa16.18■□□□□ 0.18
SHMT2-202ENST00000414700 PEBP4Q96S96 227 aa16.18■□□□□ 0.18
SHMT2-202ENST00000414700 KLHL11Q9NVR0 708 aa16.18■□□□□ 0.18
SHMT2-202ENST00000414700 ASNSD1Q9NWL6 643 aa16.18■□□□□ 0.18
SHMT2-202ENST00000414700 EHD2Q9NZN4 543 aa16.18■□□□□ 0.18
SHMT2-202ENST00000414700 PCSK1NQ9UHG2 260 aa16.18■□□□□ 0.18
SHMT2-202ENST00000414700 SAR1BQ9Y6B6 198 aa16.18■□□□□ 0.18
SHMT2-202ENST00000414700 ANAPC1Q9H1A4 1944 aa16.18■□□□□ 0.18
SHMT2-202ENST00000414700 SYNJ2BP-COX16A0A087WUM0 186 aa16.18■□□□□ 0.18
SHMT2-202ENST00000414700 TARSL2A2RTX5 802 aaKnown RBP16.18■□□□□ 0.18
SHMT2-202ENST00000414700 KCNK3O14649 394 aa16.18■□□□□ 0.18
SHMT2-202ENST00000414700 LPXNO60711 386 aa16.18■□□□□ 0.18
SHMT2-202ENST00000414700 RTN3O95197 1032 aaPredicted RBP16.18■□□□□ 0.18
SHMT2-202ENST00000414700 C8AP07357 584 aa16.18■□□□□ 0.18
SHMT2-202ENST00000414700 EPCAMP16422 314 aa16.18■□□□□ 0.18
SHMT2-202ENST00000414700 MIPP30301 263 aa16.18■□□□□ 0.18
SHMT2-202ENST00000414700 NOS2P35228 1153 aa16.18■□□□□ 0.18
SHMT2-202ENST00000414700 PTPN9P43378 593 aa16.18■□□□□ 0.18
SHMT2-202ENST00000414700 CCT5P48643 541 aa16.18■□□□□ 0.18
SHMT2-202ENST00000414700 MNAT1P51948 309 aa16.18■□□□□ 0.18
SHMT2-202ENST00000414700 SLC25A11Q02978 314 aaKnown RBP16.18■□□□□ 0.18
SHMT2-202ENST00000414700 SMTNL2Q2TAL5 461 aa16.18■□□□□ 0.18
SHMT2-202ENST00000414700 KCNT1Q5JUK3 1230 aa16.18■□□□□ 0.18
SHMT2-202ENST00000414700 SLC22A17Q8WUG5 538 aa16.18■□□□□ 0.18
SHMT2-202ENST00000414700 NPY6RQ99463 290 aa16.18■□□□□ 0.18
SHMT2-202ENST00000414700 SMARCAL1Q9NZC9 954 aa16.18■□□□□ 0.18
SHMT2-202ENST00000414700 COX16Q9P0S2 106 aa16.18■□□□□ 0.18
SHMT2-202ENST00000414700 CLASP2O75122 1294 aaKnown RBP16.17■□□□□ 0.18
SHMT2-202ENST00000414700 SULT1E1P49888 294 aa16.17■□□□□ 0.18
SHMT2-202ENST00000414700 ZNF211Q13398 564 aaPredicted RBP16.17■□□□□ 0.18
SHMT2-202ENST00000414700 SLC25A52Q3SY17 297 aa16.17■□□□□ 0.18
SHMT2-202ENST00000414700 CYP4V2Q6ZWL3 525 aaPredicted RBP16.17■□□□□ 0.18
SHMT2-202ENST00000414700 DNAJB7Q7Z6W7 309 aaPredicted RBP16.17■□□□□ 0.18
SHMT2-202ENST00000414700 MON1AQ86VX9 555 aa16.17■□□□□ 0.18
SHMT2-202ENST00000414700 CNPY4Q8N129 248 aa16.17■□□□□ 0.18
SHMT2-202ENST00000414700 CENPIQ92674 756 aaPredicted RBP16.17■□□□□ 0.18
SHMT2-202ENST00000414700 MS4A14Q96JA4 679 aa16.17■□□□□ 0.18
SHMT2-202ENST00000414700 CAPZA3Q96KX2 299 aa16.17■□□□□ 0.18
SHMT2-202ENST00000414700 TTLL2Q9BWV7 592 aa16.17■□□□□ 0.18
SHMT2-202ENST00000414700 PCDHA3Q9Y5H8 950 aa16.17■□□□□ 0.18
SHMT2-202ENST00000414700 OBSL1O75147 1896 aa16.17■□□□□ 0.18
SHMT2-202ENST00000414700 ATXN2Q99700 1313 aaKnown RBP16.16■□□□□ 0.18
SHMT2-202ENST00000414700 M0QYT0 321 aa16.16■□□□□ 0.18
SHMT2-202ENST00000414700 RFPL2O75678 378 aa16.16■□□□□ 0.18
SHMT2-202ENST00000414700 RNF8O76064 485 aa16.16■□□□□ 0.18
SHMT2-202ENST00000414700 SMAD3P84022 425 aaKnown RBP16.16■□□□□ 0.18
SHMT2-202ENST00000414700 PLD1Q13393 1074 aa16.16■□□□□ 0.18
SHMT2-202ENST00000414700 LLGL1Q15334 1064 aa16.16■□□□□ 0.18
SHMT2-202ENST00000414700 BNIPLQ7Z465 357 aa16.16■□□□□ 0.18
SHMT2-202ENST00000414700 ZWILCHQ9H900 591 aa16.16■□□□□ 0.18
SHMT2-202ENST00000414700 USP18Q9UMW8 372 aa16.16■□□□□ 0.18
SHMT2-202ENST00000414700 MIF4GDA9UHW6 222 aaKnown RBP16.16■□□□□ 0.18
SHMT2-202ENST00000414700 TBX18O95935 607 aa16.16■□□□□ 0.18
SHMT2-202ENST00000414700 IRAK1P51617 712 aa16.16■□□□□ 0.18
SHMT2-202ENST00000414700 NME3Q13232 169 aa16.16■□□□□ 0.18
SHMT2-202ENST00000414700 BTBD8Q5XKL5 378 aa16.16■□□□□ 0.18
SHMT2-202ENST00000414700 SCYL2Q6P3W7 929 aa16.16■□□□□ 0.18
SHMT2-202ENST00000414700 PSMG2Q969U7 264 aa16.16■□□□□ 0.18
SHMT2-202ENST00000414700 TACO1Q9BSH4 297 aaKnown RBP16.16■□□□□ 0.18
SHMT2-202ENST00000414700 MAGEB5Q9BZ81 275 aa16.16■□□□□ 0.18
SHMT2-202ENST00000414700 ZNF334Q9HCZ1 680 aaPredicted RBP16.16■□□□□ 0.18
SHMT2-202ENST00000414700 MAN1C1Q9NR34 630 aa16.16■□□□□ 0.18
SHMT2-202ENST00000414700 TMPRSS4Q9NRS4 437 aa16.16■□□□□ 0.18
SHMT2-202ENST00000414700 ABCC13Q9NSE7 274 aa16.16■□□□□ 0.18
SHMT2-202ENST00000414700 PIGVQ9NUD9 493 aa16.16■□□□□ 0.18
SHMT2-202ENST00000414700 SFMBT1Q9UHJ3 866 aa16.16■□□□□ 0.18
SHMT2-202ENST00000414700 HCFC2Q9Y5Z7 792 aa16.16■□□□□ 0.18
SHMT2-202ENST00000414700 CSH1P0DML2 217 aa16.15■□□□□ 0.18
SHMT2-202ENST00000414700 CSH2P0DML3 217 aa16.15■□□□□ 0.18
SHMT2-202ENST00000414700 PYGMP11217 842 aa16.15■□□□□ 0.18
SHMT2-202ENST00000414700 CTNNA2P26232 953 aa16.15■□□□□ 0.18
SHMT2-202ENST00000414700 ACAP1Q15027 740 aa16.15■□□□□ 0.18
SHMT2-202ENST00000414700 ANKS1BQ7Z6G8 1248 aa16.15■□□□□ 0.18
SHMT2-202ENST00000414700 TAC4Q86UU9 113 aa16.15■□□□□ 0.18
SHMT2-202ENST00000414700 FAM131BQ86XD5 332 aa16.15■□□□□ 0.18
SHMT2-202ENST00000414700 RHOT1Q8IXI2 618 aa16.15■□□□□ 0.18
SHMT2-202ENST00000414700 DQX1Q8TE96 717 aaKnown RBP16.15■□□□□ 0.18
SHMT2-202ENST00000414700 CASP10Q92851 521 aa16.15■□□□□ 0.18
SHMT2-202ENST00000414700 MYRFLQ96LU7 910 aa16.15■□□□□ 0.18
SHMT2-202ENST00000414700 SLITRK1Q96PX8 696 aa16.15■□□□□ 0.18
SHMT2-202ENST00000414700 MAFFQ9ULX9 164 aa16.15■□□□□ 0.18
SHMT2-202ENST00000414700 STAP1Q9ULZ2 295 aa16.15■□□□□ 0.18
SHMT2-202ENST00000414700 DENND4CQ5VZ89 1909 aa16.15■□□□□ 0.18
SHMT2-202ENST00000414700 GOLGA6CA6NDK9 693 aa16.14■□□□□ 0.17
SHMT2-202ENST00000414700 NRG2O14511 850 aaPredicted RBP16.14■□□□□ 0.17
SHMT2-202ENST00000414700 MDM4O15151 490 aa16.14■□□□□ 0.17
SHMT2-202ENST00000414700 MSI1O43347 362 aaKnown RBP16.14■□□□□ 0.17
SHMT2-202ENST00000414700 TRUB2O95900 331 aaKnown RBP16.14■□□□□ 0.17
SHMT2-202ENST00000414700 GOLGA6DP0CG33 693 aa16.14■□□□□ 0.17
SHMT2-202ENST00000414700 PCK1P35558 622 aa16.14■□□□□ 0.17
SHMT2-202ENST00000414700 GGCXP38435 758 aa16.14■□□□□ 0.17
SHMT2-202ENST00000414700 EPHB3P54753 998 aa16.14■□□□□ 0.17
SHMT2-202ENST00000414700 MLLT1Q03111 559 aaPredicted RBP16.14■□□□□ 0.17
SHMT2-202ENST00000414700 VEPH1Q14D04 833 aa16.14■□□□□ 0.17
SHMT2-202ENST00000414700 TMEM150AQ86TG1 271 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms