RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 MYO6Q9UM54 1294 aa15.36■□□□□ 0.05
CHD1-202ENST00000414220 H0Y858 1186 aa15.35■□□□□ 0.05
CHD1-202ENST00000414220 PAPSS1O43252 624 aaPredicted RBP15.35■□□□□ 0.05
CHD1-202ENST00000414220 HSF2BPO75031 334 aa15.35■□□□□ 0.05
CHD1-202ENST00000414220 LATS1O95835 1130 aa15.35■□□□□ 0.05
CHD1-202ENST00000414220 FERP16591 822 aa15.35■□□□□ 0.05
CHD1-202ENST00000414220 SLC11A2P49281 568 aa15.35■□□□□ 0.05
CHD1-202ENST00000414220 UBASH3AP57075 661 aa15.35■□□□□ 0.05
CHD1-202ENST00000414220 TBX4P57082 545 aa15.35■□□□□ 0.05
CHD1-202ENST00000414220 JAM2P57087 298 aa15.35■□□□□ 0.05
CHD1-202ENST00000414220 CDK17Q00537 523 aa15.35■□□□□ 0.05
CHD1-202ENST00000414220 FANCCQ00597 558 aa15.35■□□□□ 0.05
CHD1-202ENST00000414220 CDR2Q01850 454 aa15.35■□□□□ 0.05
CHD1-202ENST00000414220 CCINQ13939 588 aa15.35■□□□□ 0.05
CHD1-202ENST00000414220 TRIP4Q15650 581 aaPredicted RBP15.35■□□□□ 0.05
CHD1-202ENST00000414220 MAMSTRQ6ZN01 415 aa15.35■□□□□ 0.05
CHD1-202ENST00000414220 BHLHA9Q7RTU4 235 aa15.35■□□□□ 0.05
CHD1-202ENST00000414220 DENND1CQ8IV53 801 aa15.35■□□□□ 0.05
CHD1-202ENST00000414220 SPEM1Q8N4L4 309 aa15.35■□□□□ 0.05
CHD1-202ENST00000414220 WDTC1Q8N5D0 677 aa15.35■□□□□ 0.05
CHD1-202ENST00000414220 PRSS33Q8NF86 280 aa15.35■□□□□ 0.05
CHD1-202ENST00000414220 EPS8L1Q8TE68 723 aa15.35■□□□□ 0.05
CHD1-202ENST00000414220 CLEC4CQ8WTT0 213 aa15.35■□□□□ 0.05
CHD1-202ENST00000414220 C18orf8Q96DM3 657 aa15.35■□□□□ 0.05
CHD1-202ENST00000414220 FAM122AQ96E09 287 aa15.35■□□□□ 0.05
CHD1-202ENST00000414220 BBS2Q9BXC9 721 aa15.35■□□□□ 0.05
CHD1-202ENST00000414220 SLC12A6Q9UHW9 1150 aa15.35■□□□□ 0.05
CHD1-202ENST00000414220 TICRRQ7Z2Z1 1910 aa15.35■□□□□ 0.05
CHD1-202ENST00000414220 MYO16Q9Y6X6 1858 aa15.34■□□□□ 0.05
CHD1-202ENST00000414220 SHISA7A6NL88 538 aa15.34■□□□□ 0.05
CHD1-202ENST00000414220 TEX33O43247 280 aa15.34■□□□□ 0.05
CHD1-202ENST00000414220 HOXC11O43248 304 aaPredicted RBP15.34■□□□□ 0.05
CHD1-202ENST00000414220 CDH5P33151 784 aaPredicted RBP15.34■□□□□ 0.05
CHD1-202ENST00000414220 GRIA2P42262 883 aa15.34■□□□□ 0.05
CHD1-202ENST00000414220 CXCL12P48061 93 aa15.34■□□□□ 0.05
CHD1-202ENST00000414220 NRLP54845 237 aa15.34■□□□□ 0.05
CHD1-202ENST00000414220 SLC6A3Q01959 620 aa15.34■□□□□ 0.05
CHD1-202ENST00000414220 ARID5AQ03989 594 aa15.34■□□□□ 0.05
CHD1-202ENST00000414220 RING1Q06587 406 aa15.34■□□□□ 0.05
CHD1-202ENST00000414220 MTAPQ13126 283 aa15.34■□□□□ 0.05
CHD1-202ENST00000414220 MTA1Q13330 715 aa15.34■□□□□ 0.05
CHD1-202ENST00000414220 NNTQ13423 1086 aa15.34■□□□□ 0.05
CHD1-202ENST00000414220 FZD5Q13467 585 aa15.34■□□□□ 0.05
CHD1-202ENST00000414220 NR1I3Q14994 352 aa15.34■□□□□ 0.05
CHD1-202ENST00000414220 E2F5Q15329 346 aa15.34■□□□□ 0.05
CHD1-202ENST00000414220 PPP1R2P3Q6NXS1 205 aa15.34■□□□□ 0.05
CHD1-202ENST00000414220 ZC3H14Q6PJT7 736 aaKnown RBP15.34■□□□□ 0.05
CHD1-202ENST00000414220 LRSAM1Q6UWE0 723 aa15.34■□□□□ 0.05
CHD1-202ENST00000414220 Q6ZNB5 142 aa15.34■□□□□ 0.05
CHD1-202ENST00000414220 TPGS1Q6ZTW0 290 aa15.34■□□□□ 0.05
CHD1-202ENST00000414220 NOP9Q86U38 636 aaKnown RBP15.34■□□□□ 0.05
CHD1-202ENST00000414220 TMEM25Q86YD3 366 aa15.34■□□□□ 0.05
CHD1-202ENST00000414220 ZNF687Q8N1G0 1237 aa15.34■□□□□ 0.05
CHD1-202ENST00000414220 CPXM2Q8N436 756 aa15.34■□□□□ 0.05
CHD1-202ENST00000414220 IQCDQ96DY2 449 aa15.34■□□□□ 0.05
CHD1-202ENST00000414220 CHFRQ96EP1 664 aa15.34■□□□□ 0.05
CHD1-202ENST00000414220 CPXM1Q96SM3 734 aa15.34■□□□□ 0.05
CHD1-202ENST00000414220 EDEM3Q9BZQ6 932 aa15.34■□□□□ 0.05
CHD1-202ENST00000414220 ARHGEF4Q9NR80 690 aa15.34■□□□□ 0.05
CHD1-202ENST00000414220 RRN3Q9NYV6 651 aa15.34■□□□□ 0.05
CHD1-202ENST00000414220 MARK1Q9P0L2 795 aa15.34■□□□□ 0.05
CHD1-202ENST00000414220 RAPGEFL1Q9UHV5 662 aa15.34■□□□□ 0.05
CHD1-202ENST00000414220 CYTH4Q9UIA0 394 aa15.34■□□□□ 0.05
CHD1-202ENST00000414220 AGO1Q9UL18 857 aaKnown RBP15.34■□□□□ 0.05
CHD1-202ENST00000414220 TRIOO75962 3097 aa15.33■□□□□ 0.05
CHD1-202ENST00000414220 ZDBF2Q9HCK1 2354 aa15.33■□□□□ 0.04
CHD1-202ENST00000414220 TYW5A2RUC4 315 aaKnown RBP15.33■□□□□ 0.04
CHD1-202ENST00000414220 NEDD8-MDP1E9PL57 170 aa15.33■□□□□ 0.04
CHD1-202ENST00000414220 EPHB6O15197 1021 aa15.33■□□□□ 0.04
CHD1-202ENST00000414220 CBFA2T2O43439 604 aa15.33■□□□□ 0.04
CHD1-202ENST00000414220 GABBR2O75899 941 aa15.33■□□□□ 0.04
CHD1-202ENST00000414220 APOEP02649 317 aa15.33■□□□□ 0.04
CHD1-202ENST00000414220 MMEP08473 750 aa15.33■□□□□ 0.04
CHD1-202ENST00000414220 SLC2A3P11169 496 aa15.33■□□□□ 0.04
CHD1-202ENST00000414220 ZNF528Q3MIS6 628 aa15.33■□□□□ 0.04
CHD1-202ENST00000414220 MPPE1Q53F39 396 aa15.33■□□□□ 0.04
CHD1-202ENST00000414220 DCAF6Q58WW2 860 aa15.33■□□□□ 0.04
CHD1-202ENST00000414220 GRAMD4Q6IC98 578 aa15.33■□□□□ 0.04
CHD1-202ENST00000414220 FSTL4Q6MZW2 842 aa15.33■□□□□ 0.04
CHD1-202ENST00000414220 CCDC117Q8IWD4 279 aaPredicted RBP15.33■□□□□ 0.04
CHD1-202ENST00000414220 ZNF397Q8NF99 534 aaPredicted RBP15.33■□□□□ 0.04
CHD1-202ENST00000414220 DQX1Q8TE96 717 aaKnown RBP15.33■□□□□ 0.04
CHD1-202ENST00000414220 DDX1Q92499 740 aaKnown RBP15.33■□□□□ 0.04
CHD1-202ENST00000414220 WBP2Q969T9 261 aa15.33■□□□□ 0.04
CHD1-202ENST00000414220 AZIN2Q96A70 460 aa15.33■□□□□ 0.04
CHD1-202ENST00000414220 ACDQ96AP0 544 aa15.33■□□□□ 0.04
CHD1-202ENST00000414220 FAM126AQ9BYI3 521 aaPredicted RBP15.33■□□□□ 0.04
CHD1-202ENST00000414220 IRX2Q9BZI1 471 aaPredicted RBP15.33■□□□□ 0.04
CHD1-202ENST00000414220 NUCKS1Q9H1E3 243 aaKnown RBP15.33■□□□□ 0.04
CHD1-202ENST00000414220 SEPT11Q9NVA2 429 aaKnown RBP15.33■□□□□ 0.04
CHD1-202ENST00000414220 STAP1Q9ULZ2 295 aa15.33■□□□□ 0.04
CHD1-202ENST00000414220 NAALADL1Q9UQQ1 740 aa15.33■□□□□ 0.04
CHD1-202ENST00000414220 TLR6Q9Y2C9 796 aa15.33■□□□□ 0.04
CHD1-202ENST00000414220 TBC1D3BA6NDS4 549 aa15.32■□□□□ 0.04
CHD1-202ENST00000414220 GREM1O60565 184 aa15.32■□□□□ 0.04
CHD1-202ENST00000414220 KAT7O95251 611 aa15.32■□□□□ 0.04
CHD1-202ENST00000414220 EGFP01133 1207 aa15.32■□□□□ 0.04
CHD1-202ENST00000414220 TYRP14679 529 aa15.32■□□□□ 0.04
CHD1-202ENST00000414220 SCNN1AP37088 669 aa15.32■□□□□ 0.04
CHD1-202ENST00000414220 OPRD1P41143 372 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms