RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 TEAD4Q15561 434 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 SLC5A9Q2M3M2 681 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 KRT79Q5XKE5 535 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 CWF19L1Q69YN2 538 aaKnown RBP9.76□□□□□ -0.85
SNHG3-201ENST00000413987 ANKRD40Q6AI12 368 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 CATSPER3Q86XQ3 398 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 FBXO16Q8IX29 292 aaPredicted RBP9.76□□□□□ -0.85
SNHG3-201ENST00000413987 FAM133AQ8N9E0 248 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 C3orf58Q8NDZ4 430 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 OR6C4Q8NGE1 309 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 SLC5A5Q92911 643 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 HERC2P3Q9BVR0 1158 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 CCSER1Q9C0I3 900 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 SLITRK6Q9H5Y7 841 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 MMRN2Q9H8L6 949 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 TRIM39Q9HCM9 518 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 PANK4Q9NVE7 773 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 PTBP2Q9UKA9 531 aaKnown RBP9.76□□□□□ -0.85
SNHG3-201ENST00000413987 CAB39Q9Y376 341 aaPredicted RBP9.76□□□□□ -0.85
SNHG3-201ENST00000413987 L3MBTL1Q9Y468 752 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 DOCK3Q8IZD9 2030 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 NPHP3-ACAD11A0A0J9YXS1 232 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 TMEM229AB2RXF0 380 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 SERPING1P05155 500 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 SPATA31C1P0DKV0 1188 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 FCER1AP12319 257 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 ATP2A2P16615 1042 aaKnown RBP9.75□□□□□ -0.85
SNHG3-201ENST00000413987 MC4RP32245 332 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 SLC26A5P58743 744 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 RPS26P11Q5JNZ5 115 aaPredicted RBP9.75□□□□□ -0.85
SNHG3-201ENST00000413987 PGM2L1Q6PCE3 622 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 ELMSAN1Q6PJG2 1045 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 DYMQ7RTS9 669 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 PIGOQ8TEQ8 1089 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 ZFAND2BQ8WV99 257 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 TRAPPC12Q8WVT3 735 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 SGCDQ92629 289 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 DYDC2Q96IM9 177 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 AK8Q96MA6 479 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 TSC22D3Q99576 134 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 YIPF2Q9BWQ6 316 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 YIPF3Q9GZM5 350 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 RAB17Q9H0T7 212 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 STMN4Q9H169 189 aaPredicted RBP9.75□□□□□ -0.85
SNHG3-201ENST00000413987 BHMT2Q9H2M3 363 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.75□□□□□ -0.85
SNHG3-201ENST00000413987 FOXD3Q9UJU5 478 aaPredicted RBP9.75□□□□□ -0.85
SNHG3-201ENST00000413987 ZSWIM8A7E2V4 1837 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 PFASO15067 1338 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 A0A0B4J269 797 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 A0A0G2JPF8 293 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 A0A1W2PQH9 124 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 LRRD1A4D1F6 860 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 MANSC4A6NHS7 340 aaPredicted RBP9.75□□□□□ -0.85
SNHG3-201ENST00000413987 CCDC169A6NNP5 214 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 HNRNPCL3B7ZW38 293 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 E7ENQ6 273 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 SIN3BO75182 1162 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 RTN3O95197 1032 aaPredicted RBP9.75□□□□□ -0.85
SNHG3-201ENST00000413987 SLC25A27O95847 323 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 CCNE2O96020 404 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 JMJD7P0C870 316 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 HNRNPCL4P0DMR1 293 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 MSH2P43246 934 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 GCLCP48506 637 aaPredicted RBP9.75□□□□□ -0.85
SNHG3-201ENST00000413987 IFNAR2P48551 515 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 GFPT1Q06210 699 aaPredicted RBP9.75□□□□□ -0.85
SNHG3-201ENST00000413987 PDIA5Q14554 519 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 TDRD12Q587J7 1177 aaKnown RBP9.75□□□□□ -0.85
SNHG3-201ENST00000413987 CMPK2Q5EBM0 449 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 IL27RAQ6UWB1 636 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 TMC3Q7Z5M5 1100 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 GPR142Q7Z601 462 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 PGM2Q96G03 612 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 MYO19Q96H55 970 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 FAM20AQ96MK3 541 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 FNBP1Q96RU3 617 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 RAB34Q9BZG1 259 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 FAM207AQ9NSI2 230 aaPredicted RBP9.75□□□□□ -0.85
SNHG3-201ENST00000413987 FBXO40Q9UH90 709 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 ADGRE2Q9UHX3 823 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 TMED5Q9Y3A6 229 aa9.75□□□□□ -0.85
SNHG3-201ENST00000413987 ZNFX1Q9P2E3 1918 aaKnown RBP9.75□□□□□ -0.85
SNHG3-201ENST00000413987 PLXNB2O15031 1838 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 PGRMC1O00264 195 aaKnown RBP9.74□□□□□ -0.85
SNHG3-201ENST00000413987 FTCDO95954 541 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 VIMP08670 466 aaKnown RBP9.74□□□□□ -0.85
SNHG3-201ENST00000413987 CTGFP29279 349 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 PIK3CBP42338 1070 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 MMP13P45452 471 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 CAP1Q01518 475 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 TRADDQ15628 312 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 UGCGQ16739 394 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 ANKRD20A2Q5SQ80 823 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 ANKRD20A1Q5TYW2 823 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 SFMBT2Q5VUG0 894 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 ANKRD20A3Q5VUR7 823 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 ZNF783Q6ZMS7 281 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 LRRC69Q6ZNQ3 347 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 OVCH2Q7RTZ1 564 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms