RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 NOX5Q96PH1 765 aa10.53□□□□□ -0.72
TMEM248-202ENST00000413593 SPAG5Q96R06 1193 aa10.53□□□□□ -0.72
TMEM248-202ENST00000413593 DCLK3Q9C098 648 aa10.53□□□□□ -0.72
TMEM248-202ENST00000413593 RTN4Q9NQC3 1192 aaKnown RBP10.53□□□□□ -0.72
TMEM248-202ENST00000413593 PRMT8Q9NR22 394 aaPredicted RBP10.53□□□□□ -0.72
TMEM248-202ENST00000413593 SPHK2Q9NRA0 654 aa10.53□□□□□ -0.72
TMEM248-202ENST00000413593 SFMBT1Q9UHJ3 866 aa10.53□□□□□ -0.72
TMEM248-202ENST00000413593 FBXO4Q9UKT5 387 aa10.53□□□□□ -0.72
TMEM248-202ENST00000413593 ZNF510Q9Y2H8 683 aa10.53□□□□□ -0.72
TMEM248-202ENST00000413593 HBS1LQ9Y450 684 aaKnown RBP10.53□□□□□ -0.72
TMEM248-202ENST00000413593 A0A1B0GTH6 734 aa10.52□□□□□ -0.73
TMEM248-202ENST00000413593 TEX33O43247 280 aa10.52□□□□□ -0.73
TMEM248-202ENST00000413593 MSI1O43347 362 aaKnown RBP10.52□□□□□ -0.73
TMEM248-202ENST00000413593 GFPT2O94808 682 aa10.52□□□□□ -0.73
TMEM248-202ENST00000413593 SP9P0CG40 484 aa10.52□□□□□ -0.73
TMEM248-202ENST00000413593 NCAM1P13591 858 aa10.52□□□□□ -0.73
TMEM248-202ENST00000413593 CDH5P33151 784 aaPredicted RBP10.52□□□□□ -0.73
TMEM248-202ENST00000413593 SOX5P35711 763 aa10.52□□□□□ -0.73
TMEM248-202ENST00000413593 EIF2DP41214 584 aaKnown RBP10.52□□□□□ -0.73
TMEM248-202ENST00000413593 SLC6A11P48066 632 aa10.52□□□□□ -0.73
TMEM248-202ENST00000413593 YWHAZP63104 245 aaKnown RBP10.52□□□□□ -0.73
TMEM248-202ENST00000413593 MESP2Q0VG99 397 aa10.52□□□□□ -0.73
TMEM248-202ENST00000413593 ANO4Q32M45 955 aa10.52□□□□□ -0.73
TMEM248-202ENST00000413593 FBXO43Q4G163 708 aa10.52□□□□□ -0.73
TMEM248-202ENST00000413593 PTPN20Q4JDL3 420 aa10.52□□□□□ -0.73
TMEM248-202ENST00000413593 TAF3Q5VWG9 929 aa10.52□□□□□ -0.73
TMEM248-202ENST00000413593 DENND1CQ8IV53 801 aa10.52□□□□□ -0.73
TMEM248-202ENST00000413593 ETFBKMTQ8IXQ9 262 aa10.52□□□□□ -0.73
TMEM248-202ENST00000413593 TMEM35BQ8NCS4 154 aa10.52□□□□□ -0.73
TMEM248-202ENST00000413593 EPS8L1Q8TE68 723 aa10.52□□□□□ -0.73
TMEM248-202ENST00000413593 DQX1Q8TE96 717 aaKnown RBP10.52□□□□□ -0.73
TMEM248-202ENST00000413593 FAM122AQ96E09 287 aa10.52□□□□□ -0.73
TMEM248-202ENST00000413593 PIWIL1Q96J94 861 aaKnown RBP10.52□□□□□ -0.73
TMEM248-202ENST00000413593 TRIM62Q9BVG3 475 aa10.52□□□□□ -0.73
TMEM248-202ENST00000413593 PDCL3Q9H2J4 239 aa10.52□□□□□ -0.73
TMEM248-202ENST00000413593 FAM86C1Q9NVL1 165 aa10.52□□□□□ -0.73
TMEM248-202ENST00000413593 MARK1Q9P0L2 795 aa10.52□□□□□ -0.73
TMEM248-202ENST00000413593 NOCTQ9UK39 431 aaKnown RBP10.52□□□□□ -0.73
TMEM248-202ENST00000413593 AGO1Q9UL18 857 aaKnown RBP10.52□□□□□ -0.73
TMEM248-202ENST00000413593 NAALADL1Q9UQQ1 740 aa10.52□□□□□ -0.73
TMEM248-202ENST00000413593 CEP83Q9Y592 693 aa10.52□□□□□ -0.73
TMEM248-202ENST00000413593 HELZP42694 1942 aaKnown RBP10.52□□□□□ -0.73
TMEM248-202ENST00000413593 MYO16Q9Y6X6 1858 aa10.51□□□□□ -0.73
TMEM248-202ENST00000413593 CACNG3O60359 315 aa10.51□□□□□ -0.73
TMEM248-202ENST00000413593 RNF40O75150 1001 aa10.51□□□□□ -0.73
TMEM248-202ENST00000413593 TULP3O75386 442 aa10.51□□□□□ -0.73
TMEM248-202ENST00000413593 LSM8O95777 96 aaKnown RBP10.51□□□□□ -0.73
TMEM248-202ENST00000413593 ERBB2P04626 1255 aa10.51□□□□□ -0.73
TMEM248-202ENST00000413593 CHKAP35790 457 aa10.51□□□□□ -0.73
TMEM248-202ENST00000413593 STAT1P42224 750 aa10.51□□□□□ -0.73
TMEM248-202ENST00000413593 HARS2P49590 506 aaKnown RBP10.51□□□□□ -0.73
TMEM248-202ENST00000413593 CCR3P51677 355 aa10.51□□□□□ -0.73
TMEM248-202ENST00000413593 SNX16P57768 344 aa10.51□□□□□ -0.73
TMEM248-202ENST00000413593 SATB1Q01826 763 aa10.51□□□□□ -0.73
TMEM248-202ENST00000413593 CDR2Q01850 454 aa10.51□□□□□ -0.73
TMEM248-202ENST00000413593 CSTF1Q05048 431 aaKnown RBP10.51□□□□□ -0.73
TMEM248-202ENST00000413593 RING1Q06587 406 aa10.51□□□□□ -0.73
TMEM248-202ENST00000413593 TAF5Q15542 800 aa10.51□□□□□ -0.73
TMEM248-202ENST00000413593 FILIP1LQ4L180 1135 aa10.51□□□□□ -0.73
TMEM248-202ENST00000413593 SYPL2Q5VXT5 272 aa10.51□□□□□ -0.73
TMEM248-202ENST00000413593 PKN3Q6P5Z2 889 aa10.51□□□□□ -0.73
TMEM248-202ENST00000413593 OLFML1Q6UWY5 402 aa10.51□□□□□ -0.73
TMEM248-202ENST00000413593 TPGS1Q6ZTW0 290 aa10.51□□□□□ -0.73
TMEM248-202ENST00000413593 ZNF677Q86XU0 584 aa10.51□□□□□ -0.73
TMEM248-202ENST00000413593 PHTF2Q8N3S3 785 aa10.51□□□□□ -0.73
TMEM248-202ENST00000413593 IPO4Q8TEX9 1081 aaKnown RBP10.51□□□□□ -0.73
TMEM248-202ENST00000413593 SLC20A1Q8WUM9 679 aa10.51□□□□□ -0.73
TMEM248-202ENST00000413593 P2RY11Q96G91 374 aa10.51□□□□□ -0.73
TMEM248-202ENST00000413593 NAP1L5Q96NT1 182 aaPredicted RBP10.51□□□□□ -0.73
TMEM248-202ENST00000413593 DCBLD2Q96PD2 775 aa10.51□□□□□ -0.73
TMEM248-202ENST00000413593 PNKPQ96T60 521 aa10.51□□□□□ -0.73
TMEM248-202ENST00000413593 BBS2Q9BXC9 721 aa10.51□□□□□ -0.73
TMEM248-202ENST00000413593 POPDC2Q9HBU9 364 aa10.51□□□□□ -0.73
TMEM248-202ENST00000413593 ARHGEF4Q9NR80 690 aa10.51□□□□□ -0.73
TMEM248-202ENST00000413593 ASNSD1Q9NWL6 643 aa10.51□□□□□ -0.73
TMEM248-202ENST00000413593 C2orf42Q9NWW7 574 aa10.51□□□□□ -0.73
TMEM248-202ENST00000413593 WDR35Q9P2L0 1181 aa10.51□□□□□ -0.73
TMEM248-202ENST00000413593 A0A0A0MRY4 1105 aa10.5□□□□□ -0.73
TMEM248-202ENST00000413593 A0A1W2PQC6 194 aa10.5□□□□□ -0.73
TMEM248-202ENST00000413593 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.5□□□□□ -0.73
TMEM248-202ENST00000413593 CHURC1-FNTBB4DL54 471 aa10.5□□□□□ -0.73
TMEM248-202ENST00000413593 NEDD8-MDP1E9PL57 170 aa10.5□□□□□ -0.73
TMEM248-202ENST00000413593 K7EQS6 105 aa10.5□□□□□ -0.73
TMEM248-202ENST00000413593 CAPN9O14815 690 aa10.5□□□□□ -0.73
TMEM248-202ENST00000413593 HSF2BPO75031 334 aa10.5□□□□□ -0.73
TMEM248-202ENST00000413593 KAT7O95251 611 aa10.5□□□□□ -0.73
TMEM248-202ENST00000413593 PAPSS2O95340 614 aaPredicted RBP10.5□□□□□ -0.73
TMEM248-202ENST00000413593 LATS1O95835 1130 aa10.5□□□□□ -0.73
TMEM248-202ENST00000413593 SERPINC1P01008 464 aa10.5□□□□□ -0.73
TMEM248-202ENST00000413593 PENKP01210 267 aaPredicted RBP10.5□□□□□ -0.73
TMEM248-202ENST00000413593 IGLV3-27P01718 113 aa10.5□□□□□ -0.73
TMEM248-202ENST00000413593 GLI1P08151 1106 aa10.5□□□□□ -0.73
TMEM248-202ENST00000413593 MMEP08473 750 aa10.5□□□□□ -0.73
TMEM248-202ENST00000413593 TDGF1P13385 188 aa10.5□□□□□ -0.73
TMEM248-202ENST00000413593 TYRP14679 529 aa10.5□□□□□ -0.73
TMEM248-202ENST00000413593 CHRNB2P17787 502 aa10.5□□□□□ -0.73
TMEM248-202ENST00000413593 NBL1P41271 181 aa10.5□□□□□ -0.73
TMEM248-202ENST00000413593 GRIA2P42262 883 aa10.5□□□□□ -0.73
TMEM248-202ENST00000413593 CXCL12P48061 93 aa10.5□□□□□ -0.73
TMEM248-202ENST00000413593 TBX4P57082 545 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms