RNA–Protein interactions for RNA: ENST00000412962.4

CROCCP2-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

BASIC

Gene CROCCP2, Length 2,773 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-202ENST00000412962 GOT1P17174 413 aa18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 RPL9P32969 192 aaKnown RBP18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 PHBP35232 272 aa18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 SLC10A2Q12908 348 aaPredicted RBP18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 MPP2Q14168 576 aa18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 LPIN1Q14693 890 aa18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 TIGD5Q53EQ6 642 aa18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 HFE2Q6ZVN8 426 aa18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 TRMT13Q9NUP7 481 aaKnown RBP18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 FZD10Q9ULW2 581 aa18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 CAPN7Q9Y6W3 813 aa18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 CHADO15335 359 aa18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 ZFXP17010 805 aaPredicted RBP18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 NOS2P35228 1153 aa18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 RAB27AP51159 221 aa18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 PAN2Q504Q3 1202 aaKnown RBP18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 FAXCQ5TGI0 409 aa18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 SYPL2Q5VXT5 272 aa18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 CDKL3Q8IVW4 592 aaPredicted RBP18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 SMOQ99835 787 aa18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 RNF186Q9NXI6 227 aa18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 RABGEF1Q9UJ41 708 aa18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 CHMP2BQ9UQN3 213 aa18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 NOD1Q9Y239 953 aa18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 ACTL7BQ9Y614 415 aa18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 ZNF623O75123 536 aa18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 EFTUD2Q15029 972 aaKnown RBP eCLIP18.19■□□□□ 0.55e-7■■■□□ 15.2
CROCCP2-202ENST00000412962 GKAP1Q5VSY0 366 aaPredicted RBP18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 C3orf62Q6ZUJ4 267 aa18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 TAX1BP1Q86VP1 789 aa18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 LRRC34Q8IZ02 419 aa18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 CCDC110Q8TBZ0 833 aa18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 SGSM3Q96HU1 749 aa18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 SEC16BQ96JE7 1060 aa18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 CABS1Q96KC9 395 aa18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 KCNK16Q96T55 309 aa18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 NPY6RQ99463 290 aa18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 ULBP1Q9BZM6 244 aa18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 TMPRSS4Q9NRS4 437 aa18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 TMEM30AQ9NV96 361 aa18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 ETNK2Q9NVF9 386 aa18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 STAP1Q9ULZ2 295 aa18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 MFHAS1Q9Y4C4 1052 aa18.19■□□□□ 0.5
CROCCP2-202ENST00000412962 M0QYT0 321 aa18.18■□□□□ 0.5
CROCCP2-202ENST00000412962 NRP1O14786 923 aa18.18■□□□□ 0.5
CROCCP2-202ENST00000412962 AMPD1P23109 780 aa18.18■□□□□ 0.5
CROCCP2-202ENST00000412962 CST5P28325 142 aaPredicted RBP18.18■□□□□ 0.5
CROCCP2-202ENST00000412962 ARL4AP40617 200 aa18.18■□□□□ 0.5
CROCCP2-202ENST00000412962 CACNA2D1P54289 1103 aa18.18■□□□□ 0.5
CROCCP2-202ENST00000412962 NME3Q13232 169 aa18.18■□□□□ 0.5
CROCCP2-202ENST00000412962 DSC3Q14574 896 aa18.18■□□□□ 0.5
CROCCP2-202ENST00000412962 SLC45A4Q5BKX6 768 aa18.18■□□□□ 0.5
CROCCP2-202ENST00000412962 NCBP2-AS2Q69YL0 99 aa18.18■□□□□ 0.5
CROCCP2-202ENST00000412962 GPRIN1Q7Z2K8 1008 aa18.18■□□□□ 0.5
CROCCP2-202ENST00000412962 TRABD2AQ86V40 505 aa18.18■□□□□ 0.5
CROCCP2-202ENST00000412962 PALM2Q8IXS6 379 aa18.18■□□□□ 0.5
CROCCP2-202ENST00000412962 NT5C3BQ969T7 300 aa18.18■□□□□ 0.5
CROCCP2-202ENST00000412962 SLC2A13Q96QE2 648 aa18.18■□□□□ 0.5
CROCCP2-202ENST00000412962 ADAM2Q99965 735 aa18.18■□□□□ 0.5
CROCCP2-202ENST00000412962 POPDC2Q9HBU9 364 aa18.18■□□□□ 0.5
CROCCP2-202ENST00000412962 CDH9Q9ULB4 789 aa18.18■□□□□ 0.5
CROCCP2-202ENST00000412962 USP3Q9Y6I4 520 aa18.18■□□□□ 0.5
CROCCP2-202ENST00000412962 TDRD15B5MCY1 1934 aaKnown RBP18.18■□□□□ 0.5
CROCCP2-202ENST00000412962 NR1H3Q13133 447 aa18.18■□□□□ 0.5
CROCCP2-202ENST00000412962 EFHC2Q5JST6 749 aa18.18■□□□□ 0.5
CROCCP2-202ENST00000412962 RNF217Q8TC41 542 aa18.18■□□□□ 0.5
CROCCP2-202ENST00000412962 SLC24A2Q9UI40 661 aa18.18■□□□□ 0.5
CROCCP2-202ENST00000412962 INPP5FQ9Y2H2 1132 aa18.18■□□□□ 0.5
CROCCP2-202ENST00000412962 THSD7BQ9C0I4 1608 aa18.17■□□□□ 0.5
CROCCP2-202ENST00000412962 A0A0U1RQF3 1178 aa18.17■□□□□ 0.5
CROCCP2-202ENST00000412962 B3GAT3O94766 335 aa18.17■□□□□ 0.5
CROCCP2-202ENST00000412962 VIMP08670 466 aaKnown RBP18.17■□□□□ 0.5
CROCCP2-202ENST00000412962 KRT15P19012 456 aa18.17■□□□□ 0.5
CROCCP2-202ENST00000412962 PAX7P23759 505 aa18.17■□□□□ 0.5
CROCCP2-202ENST00000412962 NR2C2P49116 596 aa18.17■□□□□ 0.5
CROCCP2-202ENST00000412962 GEMIN4P57678 1058 aaKnown RBP18.17■□□□□ 0.5
CROCCP2-202ENST00000412962 PKN2Q16513 984 aaKnown RBP18.17■□□□□ 0.5
CROCCP2-202ENST00000412962 KCNT2Q6UVM3 1135 aa18.17■□□□□ 0.5
CROCCP2-202ENST00000412962 PPP1R21Q6ZMI0 780 aa18.17■□□□□ 0.5
CROCCP2-202ENST00000412962 IGDCC3Q8IVU1 814 aa18.17■□□□□ 0.5
CROCCP2-202ENST00000412962 CACNA2D3Q8IZS8 1091 aa18.17■□□□□ 0.5
CROCCP2-202ENST00000412962 PCSK9Q8NBP7 692 aaKnown RBP18.17■□□□□ 0.5
CROCCP2-202ENST00000412962 ZMIZ2Q8NF64 920 aa18.17■□□□□ 0.5
CROCCP2-202ENST00000412962 FBF1Q8TES7 1133 aa18.17■□□□□ 0.5
CROCCP2-202ENST00000412962 HHIPL1Q96JK4 782 aa18.17■□□□□ 0.5
CROCCP2-202ENST00000412962 PLCD4Q9BRC7 762 aa18.17■□□□□ 0.5
CROCCP2-202ENST00000412962 RHOBTB2Q9BYZ6 727 aa18.17■□□□□ 0.5
CROCCP2-202ENST00000412962 KLC2Q9H0B6 622 aa18.17■□□□□ 0.5
CROCCP2-202ENST00000412962 PPCSQ9HAB8 311 aa18.17■□□□□ 0.5
CROCCP2-202ENST00000412962 PSMC3IPQ9P2W1 217 aaPredicted RBP18.17■□□□□ 0.5
CROCCP2-202ENST00000412962 TSC2P49815 1807 aa18.17■□□□□ 0.5
CROCCP2-202ENST00000412962 PIAS1O75925 651 aa18.17■□□□□ 0.5
CROCCP2-202ENST00000412962 FBXO21O94952 628 aa18.17■□□□□ 0.5
CROCCP2-202ENST00000412962 ODC1P11926 461 aa18.17■□□□□ 0.5
CROCCP2-202ENST00000412962 ELK3P41970 407 aa18.17■□□□□ 0.5
CROCCP2-202ENST00000412962 XRCC4Q13426 336 aa18.17■□□□□ 0.5
CROCCP2-202ENST00000412962 ITGA7Q13683 1181 aa18.17■□□□□ 0.5
CROCCP2-202ENST00000412962 BNIPLQ7Z465 357 aa18.17■□□□□ 0.5
CROCCP2-202ENST00000412962 KIRREL3Q8IZU9 778 aa18.17■□□□□ 0.5
CROCCP2-202ENST00000412962 GDAP1Q8TB36 358 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms