RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 FBXO10Q9UK96 956 aa17.59■□□□□ 0.41
MRPL55-220ENST00000411464 PCDHA7Q9UN72 937 aa17.59■□□□□ 0.41
MRPL55-220ENST00000411464 ZNF510Q9Y2H8 683 aa17.59■□□□□ 0.41
MRPL55-220ENST00000411464 FRMD4BQ9Y2L6 1034 aa17.59■□□□□ 0.41
MRPL55-220ENST00000411464 ASCC3Q8N3C0 2202 aaKnown RBP17.59■□□□□ 0.41
MRPL55-220ENST00000411464 DMXL2Q8TDJ6 3036 aa17.58■□□□□ 0.4
MRPL55-220ENST00000411464 MEI4A8MW99 385 aa17.58■□□□□ 0.4
MRPL55-220ENST00000411464 PDXKO00764 312 aa17.58■□□□□ 0.4
MRPL55-220ENST00000411464 NPC1O15118 1278 aa17.58■□□□□ 0.4
MRPL55-220ENST00000411464 GJB3O75712 270 aa17.58■□□□□ 0.4
MRPL55-220ENST00000411464 KIF20AO95235 890 aa17.58■□□□□ 0.4
MRPL55-220ENST00000411464 HLA-DRAP01903 254 aa17.58■□□□□ 0.4
MRPL55-220ENST00000411464 NR3C1P04150 777 aa17.58■□□□□ 0.4
MRPL55-220ENST00000411464 HOXB3P14651 431 aaPredicted RBP17.58■□□□□ 0.4
MRPL55-220ENST00000411464 CHKAP35790 457 aa17.58■□□□□ 0.4
MRPL55-220ENST00000411464 ZNF132P52740 706 aa17.58■□□□□ 0.4
MRPL55-220ENST00000411464 FUT11Q495W5 492 aa17.58■□□□□ 0.4
MRPL55-220ENST00000411464 METTL3Q86U44 580 aaKnown RBP17.58■□□□□ 0.4
MRPL55-220ENST00000411464 NAXDQ8IW45 347 aa17.58■□□□□ 0.4
MRPL55-220ENST00000411464 TOE1Q96GM8 510 aaKnown RBP17.58■□□□□ 0.4
MRPL55-220ENST00000411464 CDK5RAP1Q96SZ6 601 aaKnown RBP17.58■□□□□ 0.4
MRPL55-220ENST00000411464 SLC27A6Q9Y2P4 619 aa17.58■□□□□ 0.4
MRPL55-220ENST00000411464 A0A1B0GTW7 788 aa17.57■□□□□ 0.4
MRPL55-220ENST00000411464 SYNCRIPO60506 623 aaKnown RBP17.57■□□□□ 0.4
MRPL55-220ENST00000411464 STC2O76061 302 aa17.57■□□□□ 0.4
MRPL55-220ENST00000411464 SLFN14P0C7P3 912 aa17.57■□□□□ 0.4
MRPL55-220ENST00000411464 KIF11P52732 1056 aa17.57■□□□□ 0.4
MRPL55-220ENST00000411464 COG7P83436 770 aa17.57■□□□□ 0.4
MRPL55-220ENST00000411464 INCA1Q0VD86 236 aa17.57■□□□□ 0.4
MRPL55-220ENST00000411464 GRIK2Q13002 908 aa17.57■□□□□ 0.4
MRPL55-220ENST00000411464 E2F5Q15329 346 aa17.57■□□□□ 0.4
MRPL55-220ENST00000411464 RESP18Q5W5W9 173 aa17.57■□□□□ 0.4
MRPL55-220ENST00000411464 ZNF276Q8N554 614 aa17.57■□□□□ 0.4
MRPL55-220ENST00000411464 KIAA0895Q8NCT3 520 aa17.57■□□□□ 0.4
MRPL55-220ENST00000411464 CADM4Q8NFZ8 388 aa17.57■□□□□ 0.4
MRPL55-220ENST00000411464 UCMAQ8WVF2 138 aa17.57■□□□□ 0.4
MRPL55-220ENST00000411464 DNASE2BQ8WZ79 361 aa17.57■□□□□ 0.4
MRPL55-220ENST00000411464 TWNKQ96RR1 684 aa17.57■□□□□ 0.4
MRPL55-220ENST00000411464 GPR174Q9BXC1 333 aa17.57■□□□□ 0.4
MRPL55-220ENST00000411464 BACH2Q9BYV9 841 aa17.57■□□□□ 0.4
MRPL55-220ENST00000411464 DCLK3Q9C098 648 aa17.57■□□□□ 0.4
MRPL55-220ENST00000411464 KCTD10Q9H3F6 313 aa17.57■□□□□ 0.4
MRPL55-220ENST00000411464 CYP3A43Q9HB55 503 aa17.57■□□□□ 0.4
MRPL55-220ENST00000411464 ITM2CQ9NQX7 267 aa17.57■□□□□ 0.4
MRPL55-220ENST00000411464 WSB2Q9NYS7 404 aaPredicted RBP17.57■□□□□ 0.4
MRPL55-220ENST00000411464 APOBEC2Q9Y235 224 aaKnown RBP17.57■□□□□ 0.4
MRPL55-220ENST00000411464 NFE2L3Q9Y4A8 694 aa17.57■□□□□ 0.4
MRPL55-220ENST00000411464 ATRXP46100 2492 aa17.57■□□□□ 0.4
MRPL55-220ENST00000411464 MYOFQ9NZM1 2061 aa17.56■□□□□ 0.4
MRPL55-220ENST00000411464 KLRC4O43908 158 aa17.56■□□□□ 0.4
MRPL55-220ENST00000411464 KLKB1P03952 638 aa17.56■□□□□ 0.4
MRPL55-220ENST00000411464 FTH1P19P0C7X4 201 aa17.56■□□□□ 0.4
MRPL55-220ENST00000411464 NCAM1P13591 858 aa17.56■□□□□ 0.4
MRPL55-220ENST00000411464 PDIA4P13667 645 aaKnown RBP17.56■□□□□ 0.4
MRPL55-220ENST00000411464 OXTRP30559 389 aa17.56■□□□□ 0.4
MRPL55-220ENST00000411464 VAMP7P51809 220 aa17.56■□□□□ 0.4
MRPL55-220ENST00000411464 KMT5BQ4FZB7 885 aa17.56■□□□□ 0.4
MRPL55-220ENST00000411464 CCDC186Q7Z3E2 898 aa17.56■□□□□ 0.4
MRPL55-220ENST00000411464 SCD5Q86SK9 330 aa17.56■□□□□ 0.4
MRPL55-220ENST00000411464 PROSER1Q86XN7 944 aa17.56■□□□□ 0.4
MRPL55-220ENST00000411464 TMPRSS6Q8IU80 811 aa17.56■□□□□ 0.4
MRPL55-220ENST00000411464 PNPLA1Q8N8W4 532 aa17.56■□□□□ 0.4
MRPL55-220ENST00000411464 ADAMTS14Q8WXS8 1223 aa17.56■□□□□ 0.4
MRPL55-220ENST00000411464 PAGE5Q96GU1 130 aa17.56■□□□□ 0.4
MRPL55-220ENST00000411464 MKRN2Q9H000 416 aaKnown RBP17.56■□□□□ 0.4
MRPL55-220ENST00000411464 MIR1-1HGQ9H1L0 117 aa17.56■□□□□ 0.4
MRPL55-220ENST00000411464 CLIC5Q9NZA1 410 aa17.56■□□□□ 0.4
MRPL55-220ENST00000411464 USP36Q9P275 1121 aaKnown RBP17.56■□□□□ 0.4
MRPL55-220ENST00000411464 THAP10Q9P2Z0 257 aaPredicted RBP17.56■□□□□ 0.4
MRPL55-220ENST00000411464 SERTAD1Q9UHV2 236 aa17.56■□□□□ 0.4
MRPL55-220ENST00000411464 CACNA1EQ15878 2313 aa17.56■□□□□ 0.4
MRPL55-220ENST00000411464 PCNX2A6NKB5 2137 aa17.55■□□□□ 0.4
MRPL55-220ENST00000411464 TAF4O00268 1085 aa17.55■□□□□ 0.4
MRPL55-220ENST00000411464 CALUO43852 315 aaPredicted RBP17.55■□□□□ 0.4
MRPL55-220ENST00000411464 PENKP01210 267 aaPredicted RBP17.55■□□□□ 0.4
MRPL55-220ENST00000411464 CYBBP04839 570 aa17.55■□□□□ 0.4
MRPL55-220ENST00000411464 HMBSP08397 361 aa17.55■□□□□ 0.4
MRPL55-220ENST00000411464 ACADMP11310 421 aa17.55■□□□□ 0.4
MRPL55-220ENST00000411464 CD58P19256 250 aa17.55■□□□□ 0.4
MRPL55-220ENST00000411464 TPMTP51580 245 aa17.55■□□□□ 0.4
MRPL55-220ENST00000411464 MFAP3P55082 362 aa17.55■□□□□ 0.4
MRPL55-220ENST00000411464 SCAPQ12770 1279 aa17.55■□□□□ 0.4
MRPL55-220ENST00000411464 CCDC150Q8NCX0 1101 aa17.55■□□□□ 0.4
MRPL55-220ENST00000411464 SETD7Q8WTS6 366 aaKnown RBP17.55■□□□□ 0.4
MRPL55-220ENST00000411464 PRCCQ92733 491 aaPredicted RBP17.55■□□□□ 0.4
MRPL55-220ENST00000411464 SIPA1Q96FS4 1042 aa17.55■□□□□ 0.4
MRPL55-220ENST00000411464 DUSP16Q9BY84 665 aa17.55■□□□□ 0.4
MRPL55-220ENST00000411464 RASAL2Q9UJF2 1139 aa17.55■□□□□ 0.4
MRPL55-220ENST00000411464 CFAP45Q9UL16 551 aa17.55■□□□□ 0.4
MRPL55-220ENST00000411464 USP3Q9Y6I4 520 aa17.55■□□□□ 0.4
MRPL55-220ENST00000411464 ZFYVE26Q68DK2 2539 aa17.54■□□□□ 0.4
MRPL55-220ENST00000411464 BCAT2O15382 392 aaPredicted RBP17.54■□□□□ 0.4
MRPL55-220ENST00000411464 CORO1AP31146 461 aaKnown RBP17.54■□□□□ 0.4
MRPL55-220ENST00000411464 IL12RB1P42701 662 aa17.54■□□□□ 0.4
MRPL55-220ENST00000411464 EFEMP1Q12805 493 aa17.54■□□□□ 0.4
MRPL55-220ENST00000411464 ENPP2Q13822 863 aa17.54■□□□□ 0.4
MRPL55-220ENST00000411464 ACAP1Q15027 740 aa17.54■□□□□ 0.4
MRPL55-220ENST00000411464 GEN1Q17RS7 908 aa17.54■□□□□ 0.4
MRPL55-220ENST00000411464 C1orf220Q5T0J3 134 aa17.54■□□□□ 0.4
MRPL55-220ENST00000411464 FYB2Q5VWT5 728 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms