RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 CHKAP35790 457 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 ATP5C1P36542 298 aaKnown RBP2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 GNL1P36915 607 aaPredicted RBP2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 UBA7P41226 1012 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 PLA2G4AP47712 749 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 RXRGP48443 463 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 LSSP48449 732 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 ACADVLP49748 655 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 SLC5A3P53794 718 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 ERVPABLB-1P60509 514 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 RACK1P63244 317 aaKnown RBP2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 IL9RQ01113 521 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 ZBTB16Q05516 673 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 VAC14Q08AM6 782 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 SFSWAPQ12872 951 aaKnown RBP2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 NFATC3Q12968 1075 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 CAMK2GQ13555 558 aaPredicted RBP2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 DHX8Q14562 1220 aaKnown RBP2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 ZNF234Q14588 700 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 EIF4HQ15056 248 aaKnown RBP2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 SURF1Q15526 300 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 IL17AQ16552 155 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 ME3Q16798 604 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 TTC31Q49AM3 519 aaPredicted RBP2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 HS1BP3Q53T59 392 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 SLC45A4Q5BKX6 768 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 ARSHQ5FYA8 562 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 MDH1BQ5I0G3 518 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 KCNT1Q5JUK3 1230 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 PRAMEF14Q5SWL7 426 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 C6orf132Q5T0Z8 1188 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 KIAA0895LQ68EN5 471 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 FBXL19Q6PCT2 694 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 LAYNQ6UX15 382 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 XKR5Q6UX68 686 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 CRELD2Q6UXH1 353 aaPredicted RBP2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 SERPINA13PQ6UXR4 307 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 KDM7AQ6ZMT4 941 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 ZNF574Q6ZN55 896 aaPredicted RBP2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 CENPQQ7L2Z9 268 aaPredicted RBP2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 ZNF720Q7Z2F6 126 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 LIMS2Q7Z4I7 341 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 ANKS1BQ7Z6G8 1248 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 GPBP1Q86WP2 473 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 SKAP1Q86WV1 359 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 CACUL1Q86Y37 369 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 GATAD2AQ86YP4 633 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 BRSK2Q8IWQ3 736 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 OXR1Q8N573 874 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 EID2Q8N6I1 236 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 DCBLD1Q8N8Z6 715 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 FAM184AQ8NB25 1140 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 FBXO18Q8NFZ0 1043 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 OR6B3Q8NGW1 331 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 RASSF8Q8NHQ8 419 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 SCAMP5Q8TAC9 235 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 CXorf38Q8TB03 319 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 SAP25Q8TEE9 199 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 SNRNP27Q8WVK2 155 aaKnown RBP2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 KCNE4Q8WWG9 221 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 RFFLQ8WZ73 363 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 TSC1Q92574 1164 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 GOLGA1Q92805 767 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 BHMTQ93088 406 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 WBP2Q969T9 261 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 HVCN1Q96D96 273 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 SAAL1Q96ER3 474 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 CCDC97Q96F63 343 aaPredicted RBP2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 CALML4Q96GE6 196 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 HPDLQ96IR7 371 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 ANKRD36BP1Q96IX9 119 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 HIC2Q96JB3 615 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 FIZ1Q96SL8 496 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 KLF16Q9BXK1 252 aaPredicted RBP2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 DPH1Q9BZG8 443 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 TRIM9Q9C026 710 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 CIPCQ9C0C6 399 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 ZNF518BQ9C0D4 1074 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 LHX5Q9H2C1 402 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 SNX25Q9H3E2 840 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 ST6GALNAC4Q9H4F1 302 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 FBXO44Q9H4M3 255 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 C6orf106Q9H6K1 298 aaPredicted RBP2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 CCSER2Q9H7U1 834 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 FBRSQ9HAH7 460 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 SGK2Q9HBY8 427 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 CPNE5Q9HCH3 593 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 PDE11AQ9HCR9 933 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 DMAP1Q9NPF5 467 aaPredicted RBP2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 CRTAC1Q9NQ79 661 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 GDF3Q9NR23 364 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 TLR8Q9NR97 1041 aaKnown RBP2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 AASDHPPTQ9NRN7 309 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 THSD1Q9NS62 852 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 COMMD8Q9NX08 183 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 ELOVL2Q9NXB9 296 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 RBAKQ9NYW8 714 aaPredicted RBP2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 PLK2Q9NYY3 685 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 SIX4Q9UIU6 781 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 FBXO10Q9UK96 956 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms