RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 BCCIPQ9P287 314 aaKnown RBP eCLIP13.43□□□□□ -0.26
CHRNA1-205ENST00000409542 CFAP97Q9P2B7 532 aa13.43□□□□□ -0.26
CHRNA1-205ENST00000409542 CDH9Q9ULB4 789 aa13.43□□□□□ -0.26
CHRNA1-205ENST00000409542 LUC7L2Q9Y383 392 aaKnown RBP13.43□□□□□ -0.26
CHRNA1-205ENST00000409542 PCDH15Q96QU1 1955 aa13.43□□□□□ -0.26
CHRNA1-205ENST00000409542 A0A1W2PQJ5 194 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 F8VP50 259 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 RNF225M0QZC1 329 aaPredicted RBP13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 TRIM24O15164 1050 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 GCNT3O95395 438 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 ABL1P00519 1130 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 OAS1P00973 400 aaKnown RBP13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 CFIP05156 583 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 GARTP22102 1010 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 LRRC63Q05C16 580 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 TAF10Q12962 218 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 MEA1Q16626 185 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 LY6G5CQ5SRR4 150 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 VSTM1Q6UX27 236 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 C4orf50Q6ZRC1 276 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 MIB1Q86YT6 1006 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 PGBD3Q8N328 593 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 NAT16Q8N8M0 369 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 HPDLQ96IR7 371 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 ZFRQ96KR1 1074 aaKnown RBP13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 SPACA7Q96KW9 195 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 CAMK1GQ96NX5 476 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 ERGIC2Q96RQ1 377 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 TTYH3Q9C0H2 523 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 UPK3BL1B0FP48 263 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 UPK3BL2E5RIL1 263 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 PRPF6O94906 941 aaKnown RBP13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 LDHAP00338 332 aaKnown RBP13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 TMEM191BP0C7N4 346 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 ADH5P11766 374 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 CD59P13987 128 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 PRKCSHP14314 528 aaPredicted RBP13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 PFKLP17858 780 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 GABRG2P18507 467 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 WARSP23381 471 aaKnown RBP13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 GRIA2P42262 883 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 WASP42768 502 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 MTIF2P46199 727 aaKnown RBP13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 PDE6CP51160 858 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 IFRD2Q12894 506 aaPredicted RBP13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 TSR1Q2NL82 804 aaKnown RBP13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 MDH1BQ5I0G3 518 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 EOGTQ5NDL2 527 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 ZNF662Q6ZS27 426 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 DPH6Q7L8W6 267 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 CREBRFQ8IUR6 639 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 SLC41A1Q8IVJ1 513 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 GLIS3Q8NEA6 775 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 MYCBPAPQ8TBZ2 947 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 DPEP3Q9H4B8 488 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 CAPN10Q9HC96 672 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 CD93Q9NPY3 652 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 SLC6A14Q9UN76 642 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 EXOC7Q9UPT5 735 aa13.42□□□□□ -0.26
CHRNA1-205ENST00000409542 ADAMTS20P59510 1910 aa13.41□□□□□ -0.26
CHRNA1-205ENST00000409542 FAM221BA6H8Z2 402 aa13.41□□□□□ -0.26
CHRNA1-205ENST00000409542 CLDN5O00501 218 aa13.41□□□□□ -0.26
CHRNA1-205ENST00000409542 CST3P01034 146 aaPredicted RBP13.41□□□□□ -0.26
CHRNA1-205ENST00000409542 MBL2P11226 248 aaPredicted RBP13.41□□□□□ -0.26
CHRNA1-205ENST00000409542 ANXA13P27216 316 aa13.41□□□□□ -0.26
CHRNA1-205ENST00000409542 EIF2DP41214 584 aaKnown RBP13.41□□□□□ -0.26
CHRNA1-205ENST00000409542 ARHGAP25P42331 645 aa13.41□□□□□ -0.26
CHRNA1-205ENST00000409542 TNFRSF4P43489 277 aa13.41□□□□□ -0.26
CHRNA1-205ENST00000409542 NOP14P78316 857 aaKnown RBP13.41□□□□□ -0.26
CHRNA1-205ENST00000409542 ZBED6P86452 979 aa13.41□□□□□ -0.26
CHRNA1-205ENST00000409542 DUOXA1Q1HG43 343 aa13.41□□□□□ -0.26
CHRNA1-205ENST00000409542 MIIPQ5JXC2 388 aa13.41□□□□□ -0.26
CHRNA1-205ENST00000409542 FKBP15Q5T1M5 1219 aa13.41□□□□□ -0.26
CHRNA1-205ENST00000409542 RSRC2Q7L4I2 434 aaKnown RBP13.41□□□□□ -0.26
CHRNA1-205ENST00000409542 ETFBKMTQ8IXQ9 262 aa13.41□□□□□ -0.26
CHRNA1-205ENST00000409542 SYCP3Q8IZU3 236 aa13.41□□□□□ -0.26
CHRNA1-205ENST00000409542 MINDY1Q8N5J2 469 aa13.41□□□□□ -0.26
CHRNA1-205ENST00000409542 ACRBPQ8NEB7 543 aa13.41□□□□□ -0.26
CHRNA1-205ENST00000409542 C8orf48Q96LL4 319 aa13.41□□□□□ -0.26
CHRNA1-205ENST00000409542 ARID3AQ99856 593 aa13.41□□□□□ -0.26
CHRNA1-205ENST00000409542 LZTFL1Q9NQ48 299 aa13.41□□□□□ -0.26
CHRNA1-205ENST00000409542 ARGLU1Q9NWB6 273 aaPredicted RBP13.41□□□□□ -0.26
CHRNA1-205ENST00000409542 FAM53CQ9NYF3 392 aa13.41□□□□□ -0.26
CHRNA1-205ENST00000409542 SEL1LQ9UBV2 794 aa13.41□□□□□ -0.26
CHRNA1-205ENST00000409542 EPN1Q9Y6I3 576 aaPredicted RBP13.41□□□□□ -0.26
CHRNA1-205ENST00000409542 ANKRD11Q6UB99 2663 aaPredicted RBP13.4□□□□□ -0.26
CHRNA1-205ENST00000409542 TRIM66O15016 1216 aa13.4□□□□□ -0.26
CHRNA1-205ENST00000409542 NDUFA10O95299 355 aa13.4□□□□□ -0.26
CHRNA1-205ENST00000409542 SERPINF2P08697 491 aa13.4□□□□□ -0.26
CHRNA1-205ENST00000409542 GAP43P17677 238 aa13.4□□□□□ -0.26
CHRNA1-205ENST00000409542 TUBB4BP68371 445 aa13.4□□□□□ -0.26
CHRNA1-205ENST00000409542 CDK17Q00537 523 aa13.4□□□□□ -0.26
CHRNA1-205ENST00000409542 RPL6Q02878 288 aaKnown RBP13.4□□□□□ -0.26
CHRNA1-205ENST00000409542 ZNF33AQ06730 810 aa13.4□□□□□ -0.26
CHRNA1-205ENST00000409542 MYO1EQ12965 1108 aa13.4□□□□□ -0.26
CHRNA1-205ENST00000409542 HSF5Q4G112 596 aaPredicted RBP13.4□□□□□ -0.26
CHRNA1-205ENST00000409542 SPDYCQ5MJ68 293 aa13.4□□□□□ -0.26
CHRNA1-205ENST00000409542 C19orf48Q6RUI8 117 aa13.4□□□□□ -0.26
CHRNA1-205ENST00000409542 HS2ST1Q7LGA3 356 aa13.4□□□□□ -0.26
CHRNA1-205ENST00000409542 RAB44Q7Z6P3 723 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms