RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 RSRC2Q7L4I2 434 aaKnown RBP17.25■□□□□ 0.35
TSPAN4-208ENST00000409531 SCD5Q86SK9 330 aa17.25■□□□□ 0.35
TSPAN4-208ENST00000409531 SLC35G2Q8TBE7 412 aa17.25■□□□□ 0.35
TSPAN4-208ENST00000409531 ZNF564Q8TBZ8 553 aaPredicted RBP17.25■□□□□ 0.35
TSPAN4-208ENST00000409531 ZSWIM3Q96MP5 696 aa17.25■□□□□ 0.35
TSPAN4-208ENST00000409531 SLC2A13Q96QE2 648 aa17.25■□□□□ 0.35
TSPAN4-208ENST00000409531 TMEM51Q9NW97 253 aa17.25■□□□□ 0.35
TSPAN4-208ENST00000409531 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.25■□□□□ 0.353e-6■■■□□ 18.3
TSPAN4-208ENST00000409531 STAP1Q9ULZ2 295 aa17.25■□□□□ 0.35
TSPAN4-208ENST00000409531 NARSO43776 548 aaKnown RBP17.24■□□□□ 0.35
TSPAN4-208ENST00000409531 ECI2O75521 394 aa17.24■□□□□ 0.35
TSPAN4-208ENST00000409531 MTA2O94776 668 aa17.24■□□□□ 0.35
TSPAN4-208ENST00000409531 SRFP11831 508 aa17.24■□□□□ 0.35
TSPAN4-208ENST00000409531 RARGP13631 454 aa17.24■□□□□ 0.35
TSPAN4-208ENST00000409531 PDGFRAP16234 1089 aa17.24■□□□□ 0.35
TSPAN4-208ENST00000409531 DDX6P26196 483 aaKnown RBP eCLIP17.24■□□□□ 0.352e-8■■■■■ 27
TSPAN4-208ENST00000409531 NOS2P35228 1153 aa17.24■□□□□ 0.35
TSPAN4-208ENST00000409531 HADHBP55084 474 aaKnown RBP17.24■□□□□ 0.35
TSPAN4-208ENST00000409531 TAF5Q15542 800 aa17.24■□□□□ 0.35
TSPAN4-208ENST00000409531 FAM78AQ5JUQ0 283 aa17.24■□□□□ 0.35
TSPAN4-208ENST00000409531 TANGO2Q6ICL3 276 aa17.24■□□□□ 0.35
TSPAN4-208ENST00000409531 FNIP1Q8TF40 1166 aa17.24■□□□□ 0.35
TSPAN4-208ENST00000409531 SMARCD2Q92925 531 aa17.24■□□□□ 0.35
TSPAN4-208ENST00000409531 PBXIP1Q96AQ6 731 aa17.24■□□□□ 0.35
TSPAN4-208ENST00000409531 ASB16Q96NS5 453 aa17.24■□□□□ 0.35
TSPAN4-208ENST00000409531 DDX23Q9BUQ8 820 aaKnown RBP17.24■□□□□ 0.35
TSPAN4-208ENST00000409531 LACRTQ9GZZ8 138 aa17.24■□□□□ 0.35
TSPAN4-208ENST00000409531 SLITRK6Q9H5Y7 841 aa17.24■□□□□ 0.35
TSPAN4-208ENST00000409531 NMUR1Q9HB89 426 aa17.24■□□□□ 0.35
TSPAN4-208ENST00000409531 ZFP14Q9HCL3 533 aa17.24■□□□□ 0.35
TSPAN4-208ENST00000409531 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.24■□□□□ 0.35
TSPAN4-208ENST00000409531 ANAPC7Q9UJX3 599 aa17.24■□□□□ 0.35
TSPAN4-208ENST00000409531 RCCD1A6NED2 376 aa17.23■□□□□ 0.35
TSPAN4-208ENST00000409531 GOLGA6L9A6NEM1 432 aa17.23■□□□□ 0.35
TSPAN4-208ENST00000409531 TMEM191CA6NGB0 347 aa17.23■□□□□ 0.35
TSPAN4-208ENST00000409531 C2CD4BA6NLJ0 364 aa17.23■□□□□ 0.35
TSPAN4-208ENST00000409531 MYO1FO00160 1098 aa17.23■□□□□ 0.35
TSPAN4-208ENST00000409531 TLR5O60602 858 aa17.23■□□□□ 0.35
TSPAN4-208ENST00000409531 TADA3O75528 432 aa17.23■□□□□ 0.35
TSPAN4-208ENST00000409531 GPD1P21695 349 aa17.23■□□□□ 0.35
TSPAN4-208ENST00000409531 SDC4P31431 198 aa17.23■□□□□ 0.35
TSPAN4-208ENST00000409531 RFC1P35251 1148 aaPredicted RBP17.23■□□□□ 0.35
TSPAN4-208ENST00000409531 FLT3P36888 993 aa17.23■□□□□ 0.35
TSPAN4-208ENST00000409531 NOP2P46087 812 aaKnown RBP17.23■□□□□ 0.35
TSPAN4-208ENST00000409531 RPL7AP62424 266 aaKnown RBP17.23■□□□□ 0.35
TSPAN4-208ENST00000409531 DCAF6Q58WW2 860 aa17.23■□□□□ 0.35
TSPAN4-208ENST00000409531 KLHDC10Q6PID8 442 aa17.23■□□□□ 0.35
TSPAN4-208ENST00000409531 TMEM150AQ86TG1 271 aa17.23■□□□□ 0.35
TSPAN4-208ENST00000409531 DEFB106AQ8N104 65 aa17.23■□□□□ 0.35
TSPAN4-208ENST00000409531 JOSD2Q8TAC2 188 aa17.23■□□□□ 0.35
TSPAN4-208ENST00000409531 ZSCAN18Q8TBC5 510 aaPredicted RBP17.23■□□□□ 0.35
TSPAN4-208ENST00000409531 EDEM1Q92611 657 aa17.23■□□□□ 0.35
TSPAN4-208ENST00000409531 ELSPBP1Q96BH3 223 aa17.23■□□□□ 0.35
TSPAN4-208ENST00000409531 KXD1Q9BQD3 176 aa17.23■□□□□ 0.35
TSPAN4-208ENST00000409531 NACA2Q9H009 215 aa17.23■□□□□ 0.35
TSPAN4-208ENST00000409531 TRPV4Q9HBA0 871 aa17.23■□□□□ 0.35
TSPAN4-208ENST00000409531 WNT16Q9UBV4 365 aa17.23■□□□□ 0.35
TSPAN4-208ENST00000409531 PYCARDQ9ULZ3 195 aa17.23■□□□□ 0.35
TSPAN4-208ENST00000409531 DPYSL4O14531 572 aa17.22■□□□□ 0.35
TSPAN4-208ENST00000409531 GJB6O95452 261 aa17.22■□□□□ 0.35
TSPAN4-208ENST00000409531 FYNP06241 537 aa17.22■□□□□ 0.35
TSPAN4-208ENST00000409531 ATP5C1P36542 298 aaKnown RBP17.22■□□□□ 0.35
TSPAN4-208ENST00000409531 ARHGAP25P42331 645 aa17.22■□□□□ 0.35
TSPAN4-208ENST00000409531 PTPN9P43378 593 aa17.22■□□□□ 0.35
TSPAN4-208ENST00000409531 ZNF143P52747 638 aaPredicted RBP17.22■□□□□ 0.35
TSPAN4-208ENST00000409531 NAP1L1P55209 391 aaKnown RBP17.22■□□□□ 0.35
TSPAN4-208ENST00000409531 ACAP1Q15027 740 aa17.22■□□□□ 0.35
TSPAN4-208ENST00000409531 SLC25A52Q3SY17 297 aa17.22■□□□□ 0.35
TSPAN4-208ENST00000409531 C10orf120Q5SQS8 335 aa17.22■□□□□ 0.35
TSPAN4-208ENST00000409531 GPR158Q5T848 1215 aa17.22■□□□□ 0.35
TSPAN4-208ENST00000409531 MSANTD2Q6P1R3 559 aa17.22■□□□□ 0.35
TSPAN4-208ENST00000409531 RNF10Q8N5U6 811 aaKnown RBP17.22■□□□□ 0.35
TSPAN4-208ENST00000409531 EMC1Q8N766 993 aa17.22■□□□□ 0.35
TSPAN4-208ENST00000409531 RXFP2Q8WXD0 754 aa17.22■□□□□ 0.35
TSPAN4-208ENST00000409531 NCAPGQ9BPX3 1015 aa17.22■□□□□ 0.35
TSPAN4-208ENST00000409531 CNPY3Q9BT09 278 aa17.22■□□□□ 0.35
TSPAN4-208ENST00000409531 PLA2G2FQ9BZM2 168 aa17.22■□□□□ 0.35
TSPAN4-208ENST00000409531 TASP1Q9H6P5 420 aa17.22■□□□□ 0.35
TSPAN4-208ENST00000409531 OSGEPQ9NPF4 335 aa17.22■□□□□ 0.35
TSPAN4-208ENST00000409531 SLC2A4RGQ9NR83 387 aa17.22■□□□□ 0.35
TSPAN4-208ENST00000409531 OSER1Q9NX31 292 aa17.22■□□□□ 0.35
TSPAN4-208ENST00000409531 IP6K2Q9UHH9 426 aa17.22■□□□□ 0.35
TSPAN4-208ENST00000409531 TFR2Q9UP52 801 aa17.22■□□□□ 0.35
TSPAN4-208ENST00000409531 NAALADL1Q9UQQ1 740 aa17.22■□□□□ 0.35
TSPAN4-208ENST00000409531 HELZP42694 1942 aaKnown RBP17.22■□□□□ 0.35
TSPAN4-208ENST00000409531 NUP210Q8TEM1 1887 aaPredicted RBP17.22■□□□□ 0.35
TSPAN4-208ENST00000409531 F9P00740 461 aa17.21■□□□□ 0.35
TSPAN4-208ENST00000409531 OAS1P00973 400 aaKnown RBP17.21■□□□□ 0.35
TSPAN4-208ENST00000409531 FCARP24071 287 aa17.21■□□□□ 0.35
TSPAN4-208ENST00000409531 GBP1P32455 592 aa17.21■□□□□ 0.35
TSPAN4-208ENST00000409531 DEKP35659 375 aaKnown RBP17.21■□□□□ 0.35
TSPAN4-208ENST00000409531 PGFP49763 221 aa17.21■□□□□ 0.35
TSPAN4-208ENST00000409531 PIGHQ14442 188 aaPredicted RBP17.21■□□□□ 0.35
TSPAN4-208ENST00000409531 STXBP5Q5T5C0 1151 aa17.21■□□□□ 0.35
TSPAN4-208ENST00000409531 SYPL2Q5VXT5 272 aa17.21■□□□□ 0.35
TSPAN4-208ENST00000409531 ARID3BQ8IVW6 561 aaPredicted RBP17.21■□□□□ 0.35
TSPAN4-208ENST00000409531 NT5C3BQ969T7 300 aa17.21■□□□□ 0.35
TSPAN4-208ENST00000409531 E2F7Q96AV8 911 aa17.21■□□□□ 0.35
TSPAN4-208ENST00000409531 CCSER2Q9H7U1 834 aa17.21■□□□□ 0.35
TSPAN4-208ENST00000409531 TRPC7Q9HCX4 862 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms