RNA–Protein interactions for RNA: ENST00000409483.5

PTPRN2-205, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN2, Length 4,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-205ENST00000409483 CXCL17Q6UXB2 119 aa16.98■□□□□ 0.31
PTPRN2-205ENST00000409483 PHF13Q86YI8 300 aaPredicted RBP16.98■□□□□ 0.31
PTPRN2-205ENST00000409483 RNF148Q8N7C7 305 aa16.98■□□□□ 0.31
PTPRN2-205ENST00000409483 ABTB1Q969K4 478 aaPredicted RBP16.98■□□□□ 0.31
PTPRN2-205ENST00000409483 RNPEPQ9H4A4 650 aa16.98■□□□□ 0.31
PTPRN2-205ENST00000409483 RBM22Q9NW64 420 aaKnown RBP eCLIP16.98■□□□□ 0.313e-6■■■□□ 18
PTPRN2-205ENST00000409483 CDYLQ9Y232 598 aa16.98■□□□□ 0.31
PTPRN2-205ENST00000409483 ATP6V1G2O95670 118 aa16.98■□□□□ 0.31
PTPRN2-205ENST00000409483 ERVK-10P10266 1014 aa16.98■□□□□ 0.31
PTPRN2-205ENST00000409483 CHRM3P20309 590 aa16.98■□□□□ 0.31
PTPRN2-205ENST00000409483 FUKQ8N0W3 1084 aa16.98■□□□□ 0.31
PTPRN2-205ENST00000409483 TTC30BQ8N4P2 665 aa16.98■□□□□ 0.31
PTPRN2-205ENST00000409483 EIF1ADQ8N9N8 165 aaKnown RBP16.98■□□□□ 0.31
PTPRN2-205ENST00000409483 MRPL1Q9BYD6 325 aaKnown RBP16.98■□□□□ 0.31
PTPRN2-205ENST00000409483 ILKAPQ9H0C8 392 aaPredicted RBP16.98■□□□□ 0.31
PTPRN2-205ENST00000409483 DMAC2Q9NW81 257 aa16.98■□□□□ 0.31
PTPRN2-205ENST00000409483 CLDN5O00501 218 aa16.97■□□□□ 0.31
PTPRN2-205ENST00000409483 MTSS1O43312 755 aa16.97■□□□□ 0.31
PTPRN2-205ENST00000409483 SETSIPP0DME0 302 aa16.97■□□□□ 0.31
PTPRN2-205ENST00000409483 CPA3P15088 417 aa16.97■□□□□ 0.31
PTPRN2-205ENST00000409483 CHRNB2P17787 502 aa16.97■□□□□ 0.31
PTPRN2-205ENST00000409483 PTAR1Q7Z6K3 402 aaPredicted RBP16.97■□□□□ 0.31
PTPRN2-205ENST00000409483 C12orf56Q8IXR9 622 aa16.97■□□□□ 0.31
PTPRN2-205ENST00000409483 ALLCQ8N6M5 410 aa16.97■□□□□ 0.31
PTPRN2-205ENST00000409483 PARP4Q9UKK3 1724 aaKnown RBP16.97■□□□□ 0.31
PTPRN2-205ENST00000409483 DUOX1Q9NRD9 1551 aa16.97■□□□□ 0.31
PTPRN2-205ENST00000409483 KCNJ2P63252 427 aa16.97■□□□□ 0.31
PTPRN2-205ENST00000409483 CSHL1Q14406 222 aa16.97■□□□□ 0.31
PTPRN2-205ENST00000409483 LGMNQ99538 433 aa16.97■□□□□ 0.31
PTPRN2-205ENST00000409483 CXorf56Q9H5V9 222 aa16.97■□□□□ 0.31
PTPRN2-205ENST00000409483 BTBD7Q9P203 1132 aa16.97■□□□□ 0.31
PTPRN2-205ENST00000409483 ARHGAP28Q9P2N2 729 aa16.97■□□□□ 0.31
PTPRN2-205ENST00000409483 ZNF541Q9H0D2 1346 aa16.97■□□□□ 0.31
PTPRN2-205ENST00000409483 FCHO1O14526 889 aa16.97■□□□□ 0.31
PTPRN2-205ENST00000409483 MMP8P22894 467 aa16.97■□□□□ 0.31
PTPRN2-205ENST00000409483 HOXD13P35453 343 aa16.97■□□□□ 0.31
PTPRN2-205ENST00000409483 DRG2P55039 364 aaKnown RBP16.97■□□□□ 0.31
PTPRN2-205ENST00000409483 FASTKD3Q14CZ7 662 aaKnown RBP16.97■□□□□ 0.31
PTPRN2-205ENST00000409483 ZRANB3Q5FWF4 1079 aa16.97■□□□□ 0.31
PTPRN2-205ENST00000409483 RARS2Q5T160 578 aaKnown RBP16.97■□□□□ 0.31
PTPRN2-205ENST00000409483 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.97■□□□□ 0.31
PTPRN2-205ENST00000409483 FBXO32Q969P5 355 aa16.97■□□□□ 0.31
PTPRN2-205ENST00000409483 VTA1Q9NP79 307 aa16.97■□□□□ 0.31
PTPRN2-205ENST00000409483 PLA2G6O60733 806 aa16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 PPP1R26Q5T8A7 1209 aaPredicted RBP16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 C4orf22Q6V702 233 aa16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 PIGZQ86VD9 579 aa16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 ATXN2LQ8WWM7 1075 aaKnown RBP16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 C18orf25Q96B23 403 aaPredicted RBP16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 ING2Q9H160 280 aa16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 APOBEC3GQ9HC16 384 aaKnown RBP16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 EML4Q9HC35 981 aaKnown RBP16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 TMEM191CA6NGB0 347 aa16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 SCAMP3O14828 347 aaKnown RBP16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 NUDT17P0C025 328 aa16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 DRD4P21917 467 aa16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 CKAP2Q8WWK9 683 aa16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 NDRG1Q92597 394 aaKnown RBP16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 LPPQ93052 612 aa16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 EME1Q96AY2 570 aa16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 PTPRHQ9HD43 1115 aa16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 SLC30A1Q9Y6M5 507 aa16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 GPR182O15218 404 aa16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 ANXA9O76027 345 aa16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 C4BPAP04003 597 aaKnown RBP16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 ZCCHC18P0CG32 403 aa16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 CREB1P16220 341 aa16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 MGAT5Q09328 741 aa16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 MED21Q13503 144 aa16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 OVOS1Q6IE37 1185 aa16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 GANCQ8TET4 914 aa16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 PHF21BQ96EK2 531 aa16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 KCNK16Q96T55 309 aa16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 TBCBQ99426 244 aa16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 APOL5Q9BWW9 433 aa16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 WARS2Q9UGM6 360 aaKnown RBP16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 ORC6Q9Y5N6 252 aa16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 AKAP10O43572 662 aa16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 PFDN1O60925 122 aa16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 VAPBO95292 243 aa16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 PGK1P00558 417 aa16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 TFE3P19532 575 aaPredicted RBP16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 HOXD10P28358 340 aa16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 SCNN1GP51170 649 aa16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 PLK1P53350 603 aa16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 SPDYAQ5MJ70 313 aa16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 POLNQ7Z5Q5 900 aa16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 NXF3Q9H4D5 531 aaKnown RBP16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 NOCTQ9UK39 431 aaKnown RBP16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 PPME1Q9Y570 386 aa16.96■□□□□ 0.31
PTPRN2-205ENST00000409483 RGPD5Q99666 1765 aa16.96■□□□□ 0.3
PTPRN2-205ENST00000409483 ARFGEF2Q9Y6D5 1785 aa16.96■□□□□ 0.3
PTPRN2-205ENST00000409483 STRNO43815 780 aa16.95■□□□□ 0.3
PTPRN2-205ENST00000409483 F9P00740 461 aa16.95■□□□□ 0.3
PTPRN2-205ENST00000409483 YBX3P16989 372 aaKnown RBP eCLIP16.95■□□□□ 0.36e-7■■■■■ 40.5
PTPRN2-205ENST00000409483 ZNF143P52747 638 aaPredicted RBP16.95■□□□□ 0.3
PTPRN2-205ENST00000409483 SENP8Q96LD8 212 aa16.95■□□□□ 0.3
PTPRN2-205ENST00000409483 MBOAT7Q96N66 472 aa16.95■□□□□ 0.3
PTPRN2-205ENST00000409483 TINF2Q9BSI4 451 aa16.95■□□□□ 0.3
PTPRN2-205ENST00000409483 CCDC90BQ9GZT6 254 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms