RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 NLRP14Q86W24 1093 aa21.48■■□□□ 1.03
USP39-203ENST00000409470 PDIK1LQ8N165 341 aa21.48■■□□□ 1.03
USP39-203ENST00000409470 THEM5Q8N1Q8 247 aa21.48■■□□□ 1.03
USP39-203ENST00000409470 ARHGEF37A1IGU5 675 aa21.48■■□□□ 1.03
USP39-203ENST00000409470 BDNFP23560 247 aa21.48■■□□□ 1.03
USP39-203ENST00000409470 RNASELQ05823 741 aaKnown RBP21.48■■□□□ 1.03
USP39-203ENST00000409470 MBTPS1Q14703 1052 aa21.48■■□□□ 1.03
USP39-203ENST00000409470 FAM171BQ6P995 826 aa21.48■■□□□ 1.03
USP39-203ENST00000409470 SLC24A5Q71RS6 500 aa21.48■■□□□ 1.03
USP39-203ENST00000409470 RTN4RL1Q86UN2 441 aaPredicted RBP21.48■■□□□ 1.03
USP39-203ENST00000409470 LRRN4Q8WUT4 740 aa21.48■■□□□ 1.03
USP39-203ENST00000409470 RTP4Q96DX8 246 aa21.48■■□□□ 1.03
USP39-203ENST00000409470 RAB6BQ9NRW1 208 aa21.48■■□□□ 1.03
USP39-203ENST00000409470 RCOR3Q9P2K3 495 aaPredicted RBP21.48■■□□□ 1.03
USP39-203ENST00000409470 LGALS13Q9UHV8 139 aa21.48■■□□□ 1.03
USP39-203ENST00000409470 C9IYK1 514 aa21.47■■□□□ 1.03
USP39-203ENST00000409470 HHLA1C9JL84 531 aa21.47■■□□□ 1.03
USP39-203ENST00000409470 EOMESO95936 686 aa21.47■■□□□ 1.03
USP39-203ENST00000409470 ITGB1P05556 798 aa21.47■■□□□ 1.03
USP39-203ENST00000409470 NCAM1P13591 858 aa21.47■■□□□ 1.03
USP39-203ENST00000409470 SLC10A2Q12908 348 aaPredicted RBP21.47■■□□□ 1.03
USP39-203ENST00000409470 XRCC4Q13426 336 aa21.47■■□□□ 1.03
USP39-203ENST00000409470 BBS9Q3SYG4 887 aa21.47■■□□□ 1.03
USP39-203ENST00000409470 MSS51Q4VC12 460 aa21.47■■□□□ 1.03
USP39-203ENST00000409470 TRAF7Q6Q0C0 670 aa21.47■■□□□ 1.03
USP39-203ENST00000409470 BNIPLQ7Z465 357 aa21.47■■□□□ 1.03
USP39-203ENST00000409470 TMPRSS4Q9NRS4 437 aa21.47■■□□□ 1.03
USP39-203ENST00000409470 PIGVQ9NUD9 493 aa21.47■■□□□ 1.03
USP39-203ENST00000409470 GMNCA6NCL1 334 aa21.46■■□□□ 1.03
USP39-203ENST00000409470 F8W810 466 aa21.46■■□□□ 1.03
USP39-203ENST00000409470 H3BRJ5 948 aa21.46■■□□□ 1.03
USP39-203ENST00000409470 TRAPPC3O43617 180 aa21.46■■□□□ 1.03
USP39-203ENST00000409470 LTFP02788 710 aa21.46■■□□□ 1.03
USP39-203ENST00000409470 FYNP06241 537 aa21.46■■□□□ 1.03
USP39-203ENST00000409470 SLC45A4Q5BKX6 768 aa21.46■■□□□ 1.03
USP39-203ENST00000409470 EFHC2Q5JST6 749 aa21.46■■□□□ 1.03
USP39-203ENST00000409470 FAM182AQ5T1J6 154 aa21.46■■□□□ 1.03
USP39-203ENST00000409470 SYCP2LQ5T4T6 812 aa21.46■■□□□ 1.03
USP39-203ENST00000409470 NCBP2-AS2Q69YL0 99 aa21.46■■□□□ 1.03
USP39-203ENST00000409470 RIBC1Q8N443 379 aaPredicted RBP21.46■■□□□ 1.03
USP39-203ENST00000409470 CCDC33Q8N5R6 958 aa21.46■■□□□ 1.03
USP39-203ENST00000409470 SLAIN1Q8ND83 568 aa21.46■■□□□ 1.03
USP39-203ENST00000409470 ADAM32Q8TC27 787 aa21.46■■□□□ 1.03
USP39-203ENST00000409470 CENPTQ96BT3 561 aa21.46■■□□□ 1.03
USP39-203ENST00000409470 SUSD3Q96L08 255 aa21.46■■□□□ 1.03
USP39-203ENST00000409470 CCT8L2Q96SF2 557 aa21.46■■□□□ 1.03
USP39-203ENST00000409470 FAM107BQ9H098 131 aa21.46■■□□□ 1.03
USP39-203ENST00000409470 CSNK1G1Q9HCP0 422 aa21.46■■□□□ 1.03
USP39-203ENST00000409470 INTS9Q9NV88 658 aaKnown RBP21.46■■□□□ 1.03
USP39-203ENST00000409470 USP3Q9Y6I4 520 aa21.46■■□□□ 1.03
USP39-203ENST00000409470 POC1B-GALNT4F8VUJ3 575 aa21.46■■□□□ 1.03
USP39-203ENST00000409470 CHADO15335 359 aa21.46■■□□□ 1.03
USP39-203ENST00000409470 INPPL1O15357 1258 aa21.46■■□□□ 1.03
USP39-203ENST00000409470 PHBP35232 272 aa21.46■■□□□ 1.03
USP39-203ENST00000409470 TSPY1Q01534 308 aa21.46■■□□□ 1.03
USP39-203ENST00000409470 MTM1Q13496 603 aa21.46■■□□□ 1.03
USP39-203ENST00000409470 CTU1Q7Z7A3 348 aaKnown RBP21.46■■□□□ 1.03
USP39-203ENST00000409470 CYP4X1Q8N118 509 aa21.46■■□□□ 1.03
USP39-203ENST00000409470 ATP11CQ8NB49 1132 aa21.46■■□□□ 1.03
USP39-203ENST00000409470 OR10T2Q8NGX3 314 aa21.46■■□□□ 1.03
USP39-203ENST00000409470 URGCPQ8TCY9 931 aa21.46■■□□□ 1.03
USP39-203ENST00000409470 RNF139Q8WU17 664 aa21.46■■□□□ 1.03
USP39-203ENST00000409470 XPO6Q96QU8 1125 aaKnown RBP21.46■■□□□ 1.03
USP39-203ENST00000409470 TMEM209Q96SK2 561 aa21.46■■□□□ 1.03
USP39-203ENST00000409470 KLC2Q9H0B6 622 aa21.46■■□□□ 1.03
USP39-203ENST00000409470 DMAP1Q9NPF5 467 aaPredicted RBP21.46■■□□□ 1.03
USP39-203ENST00000409470 ETNK2Q9NVF9 386 aa21.46■■□□□ 1.03
USP39-203ENST00000409470 TMLHEQ9NVH6 421 aa21.46■■□□□ 1.03
USP39-203ENST00000409470 TSC2P49815 1807 aa21.46■■□□□ 1.03
USP39-203ENST00000409470 E7ESA3 106 aa21.45■■□□□ 1.02
USP39-203ENST00000409470 CREB3O43889 395 aa21.45■■□□□ 1.02
USP39-203ENST00000409470 KCNJ11Q14654 390 aa21.45■■□□□ 1.02
USP39-203ENST00000409470 TMED2Q15363 201 aa21.45■■□□□ 1.02
USP39-203ENST00000409470 MAPRE1Q15691 268 aaKnown RBP21.45■■□□□ 1.02
USP39-203ENST00000409470 KCNT2Q6UVM3 1135 aa21.45■■□□□ 1.02
USP39-203ENST00000409470 PPP1R21Q6ZMI0 780 aa21.45■■□□□ 1.02
USP39-203ENST00000409470 PALM2Q8IXS6 379 aa21.45■■□□□ 1.02
USP39-203ENST00000409470 SLC43A3Q8NBI5 491 aa21.45■■□□□ 1.02
USP39-203ENST00000409470 FBXO36Q8NEA4 188 aa21.45■■□□□ 1.02
USP39-203ENST00000409470 CCDC110Q8TBZ0 833 aa21.45■■□□□ 1.02
USP39-203ENST00000409470 ARHGEF4Q9NR80 690 aa21.45■■□□□ 1.02
USP39-203ENST00000409470 DTLQ9NZJ0 730 aa21.45■■□□□ 1.02
USP39-203ENST00000409470 MFHAS1Q9Y4C4 1052 aa21.45■■□□□ 1.02
USP39-203ENST00000409470 FAM107AO95990 144 aa21.45■■□□□ 1.02
USP39-203ENST00000409470 NOMO2Q5JPE7 1267 aa21.45■■□□□ 1.02
USP39-203ENST00000409470 BZW1Q7L1Q6 419 aaKnown RBP21.45■■□□□ 1.02
USP39-203ENST00000409470 ZNF280BQ86YH2 543 aa21.45■■□□□ 1.02
USP39-203ENST00000409470 ZNF473Q8WTR7 871 aaKnown RBP21.45■■□□□ 1.02
USP39-203ENST00000409470 LINC01599Q8WXQ3 324 aa21.45■■□□□ 1.02
USP39-203ENST00000409470 QKIQ96PU8 341 aaKnown RBP eCLIP21.45■■□□□ 1.02
USP39-203ENST00000409470 PRDM16Q9HAZ2 1276 aa21.45■■□□□ 1.02
USP39-203ENST00000409470 CEP350Q5VT06 3117 aa21.45■■□□□ 1.02
USP39-203ENST00000409470 BRCA2P51587 3418 aa21.44■■□□□ 1.02
USP39-203ENST00000409470 FOXO6A8MYZ6 492 aa21.44■■□□□ 1.02
USP39-203ENST00000409470 ARVCFO00192 962 aa21.44■■□□□ 1.02
USP39-203ENST00000409470 EBAG9O00559 213 aa21.44■■□□□ 1.02
USP39-203ENST00000409470 TYMPP19971 482 aa21.44■■□□□ 1.02
USP39-203ENST00000409470 GRK4P32298 578 aa21.44■■□□□ 1.02
USP39-203ENST00000409470 GPX6P59796 221 aa21.44■■□□□ 1.02
USP39-203ENST00000409470 YWHAHQ04917 246 aaPredicted RBP21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms