RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 RHBDF2Q6PJF5 856 aa20.72■□□□□ 0.91
PDLIM2-207ENST00000409417 TXNDC11Q6PKC3 985 aa20.72■□□□□ 0.91
PDLIM2-207ENST00000409417 SLC26A9Q7LBE3 791 aa20.72■□□□□ 0.91
PDLIM2-207ENST00000409417 ZNF397Q8NF99 534 aaPredicted RBP20.72■□□□□ 0.91
PDLIM2-207ENST00000409417 DQX1Q8TE96 717 aaKnown RBP20.72■□□□□ 0.91
PDLIM2-207ENST00000409417 CHFRQ96EP1 664 aa20.72■□□□□ 0.91
PDLIM2-207ENST00000409417 NUCKS1Q9H1E3 243 aaKnown RBP20.72■□□□□ 0.91
PDLIM2-207ENST00000409417 MTF2Q9Y483 593 aaPredicted RBP20.72■□□□□ 0.91
PDLIM2-207ENST00000409417 ZNF318Q5VUA4 2279 aa20.72■□□□□ 0.91
PDLIM2-207ENST00000409417 MSI1O43347 362 aaKnown RBP20.71■□□□□ 0.91
PDLIM2-207ENST00000409417 ADH1CP00326 375 aa20.71■□□□□ 0.91
PDLIM2-207ENST00000409417 HMBSP08397 361 aa20.71■□□□□ 0.91
PDLIM2-207ENST00000409417 UNGP13051 313 aaPredicted RBP20.71■□□□□ 0.91
PDLIM2-207ENST00000409417 MMP8P22894 467 aa20.71■□□□□ 0.91
PDLIM2-207ENST00000409417 SCNN1AP37088 669 aa20.71■□□□□ 0.91
PDLIM2-207ENST00000409417 VCPP55072 806 aaKnown RBP20.71■□□□□ 0.91
PDLIM2-207ENST00000409417 ASIC2Q16515 512 aa20.71■□□□□ 0.91
PDLIM2-207ENST00000409417 ZNF687Q8N1G0 1237 aa20.71■□□□□ 0.91
PDLIM2-207ENST00000409417 SYN2Q92777 582 aaPredicted RBP20.71■□□□□ 0.91
PDLIM2-207ENST00000409417 SLC2A13Q96QE2 648 aa20.71■□□□□ 0.91
PDLIM2-207ENST00000409417 SYT11Q9BT88 431 aa20.71■□□□□ 0.91
PDLIM2-207ENST00000409417 CAPN11Q9UMQ6 739 aa20.71■□□□□ 0.91
PDLIM2-207ENST00000409417 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.71■□□□□ 0.91
PDLIM2-207ENST00000409417 COL4A3Q01955 1670 aa20.71■□□□□ 0.91
PDLIM2-207ENST00000409417 TARSP26639 723 aaKnown RBP20.7■□□□□ 0.9
PDLIM2-207ENST00000409417 CORO1AP31146 461 aaKnown RBP20.7■□□□□ 0.9
PDLIM2-207ENST00000409417 PRKCIP41743 596 aa20.7■□□□□ 0.9
PDLIM2-207ENST00000409417 NSFP46459 744 aaKnown RBP20.7■□□□□ 0.9
PDLIM2-207ENST00000409417 HARS2P49590 506 aaKnown RBP20.7■□□□□ 0.9
PDLIM2-207ENST00000409417 ZBED6P86452 979 aa20.7■□□□□ 0.9
PDLIM2-207ENST00000409417 CENPCQ03188 943 aa20.7■□□□□ 0.9
PDLIM2-207ENST00000409417 NNTQ13423 1086 aa20.7■□□□□ 0.9
PDLIM2-207ENST00000409417 CLEC16AQ2KHT3 1053 aa20.7■□□□□ 0.9
PDLIM2-207ENST00000409417 LY6G5CQ5SRR4 150 aa20.7■□□□□ 0.9
PDLIM2-207ENST00000409417 E4F1Q66K89 784 aaPredicted RBP20.7■□□□□ 0.9
PDLIM2-207ENST00000409417 SPECC1LQ69YQ0 1117 aa20.7■□□□□ 0.9
PDLIM2-207ENST00000409417 XYLT1Q86Y38 959 aa20.7■□□□□ 0.9
PDLIM2-207ENST00000409417 CCDC105Q8IYK2 499 aa20.7■□□□□ 0.9
PDLIM2-207ENST00000409417 TMEM105Q8N8V8 129 aa20.7■□□□□ 0.9
PDLIM2-207ENST00000409417 SERPINB11Q96P15 392 aa20.7■□□□□ 0.9
PDLIM2-207ENST00000409417 SPHK2Q9NRA0 654 aa20.7■□□□□ 0.9
PDLIM2-207ENST00000409417 SEPT11Q9NVA2 429 aaKnown RBP20.7■□□□□ 0.9
PDLIM2-207ENST00000409417 LUC7L2Q9Y383 392 aaKnown RBP20.7■□□□□ 0.9
PDLIM2-207ENST00000409417 TRDMT1O14717 391 aaKnown RBP20.69■□□□□ 0.9
PDLIM2-207ENST00000409417 NCAM2O15394 837 aa20.69■□□□□ 0.9
PDLIM2-207ENST00000409417 GRAP2O75791 330 aa20.69■□□□□ 0.9
PDLIM2-207ENST00000409417 IGLV3-27P01718 113 aa20.69■□□□□ 0.9
PDLIM2-207ENST00000409417 GYPCP04921 128 aa20.69■□□□□ 0.9
PDLIM2-207ENST00000409417 RING1Q06587 406 aa20.69■□□□□ 0.9
PDLIM2-207ENST00000409417 C2CD6Q53TS8 623 aa20.69■□□□□ 0.9
PDLIM2-207ENST00000409417 DCAF6Q58WW2 860 aa20.69■□□□□ 0.9
PDLIM2-207ENST00000409417 SARM1Q6SZW1 724 aa20.69■□□□□ 0.9
PDLIM2-207ENST00000409417 MMS22LQ6ZRQ5 1243 aa20.69■□□□□ 0.9
PDLIM2-207ENST00000409417 DENND1CQ8IV53 801 aa20.69■□□□□ 0.9
PDLIM2-207ENST00000409417 SLC30A5Q8TAD4 765 aa20.69■□□□□ 0.9
PDLIM2-207ENST00000409417 CPLX3Q8WVH0 158 aa20.69■□□□□ 0.9
PDLIM2-207ENST00000409417 CLDN23Q96B33 292 aa20.69■□□□□ 0.9
PDLIM2-207ENST00000409417 RBSNQ9H1K0 784 aa20.69■□□□□ 0.9
PDLIM2-207ENST00000409417 AGO1Q9UL18 857 aaKnown RBP20.69■□□□□ 0.9
PDLIM2-207ENST00000409417 NDRG2Q9UN36 371 aaKnown RBP20.69■□□□□ 0.9
PDLIM2-207ENST00000409417 TLR6Q9Y2C9 796 aa20.69■□□□□ 0.9
PDLIM2-207ENST00000409417 FAM170AA1A519 330 aa20.69■□□□□ 0.9
PDLIM2-207ENST00000409417 ADH5P11766 374 aa20.69■□□□□ 0.9
PDLIM2-207ENST00000409417 TBX4P57082 545 aa20.69■□□□□ 0.9
PDLIM2-207ENST00000409417 CDK17Q00537 523 aa20.69■□□□□ 0.9
PDLIM2-207ENST00000409417 KLHL30Q0D2K2 578 aa20.69■□□□□ 0.9
PDLIM2-207ENST00000409417 FZD5Q13467 585 aa20.69■□□□□ 0.9
PDLIM2-207ENST00000409417 PON2Q15165 354 aa20.69■□□□□ 0.9
PDLIM2-207ENST00000409417 GAB4Q2WGN9 574 aa20.69■□□□□ 0.9
PDLIM2-207ENST00000409417 GAS2L3Q86XJ1 694 aa20.69■□□□□ 0.9
PDLIM2-207ENST00000409417 TMEM25Q86YD3 366 aa20.69■□□□□ 0.9
PDLIM2-207ENST00000409417 UNC45BQ8IWX7 931 aa20.69■□□□□ 0.9
PDLIM2-207ENST00000409417 DEFB106AQ8N104 65 aa20.69■□□□□ 0.9
PDLIM2-207ENST00000409417 EXOC4Q96A65 974 aa20.69■□□□□ 0.9
PDLIM2-207ENST00000409417 P2RY13Q9BPV8 354 aa20.69■□□□□ 0.9
PDLIM2-207ENST00000409417 ANP32EQ9BTT0 268 aa20.69■□□□□ 0.9
PDLIM2-207ENST00000409417 HAUS4Q9H6D7 363 aa20.69■□□□□ 0.9
PDLIM2-207ENST00000409417 DLGAP2Q9P1A6 1054 aa20.69■□□□□ 0.9
PDLIM2-207ENST00000409417 DAB1O75553 588 aa20.68■□□□□ 0.9
PDLIM2-207ENST00000409417 TRUB2O95900 331 aaKnown RBP20.68■□□□□ 0.9
PDLIM2-207ENST00000409417 IGLV3-25P01717 112 aa20.68■□□□□ 0.9
PDLIM2-207ENST00000409417 DCNP07585 359 aaKnown RBP20.68■□□□□ 0.9
PDLIM2-207ENST00000409417 TNFAIP3P21580 790 aa20.68■□□□□ 0.9
PDLIM2-207ENST00000409417 CHKAP35790 457 aa20.68■□□□□ 0.9
PDLIM2-207ENST00000409417 GAD2Q05329 585 aa20.68■□□□□ 0.9
PDLIM2-207ENST00000409417 TMEM196Q5HYL7 178 aa20.68■□□□□ 0.9
PDLIM2-207ENST00000409417 FAM102AQ5T9C2 384 aaPredicted RBP20.68■□□□□ 0.9
PDLIM2-207ENST00000409417 NUGGCQ68CJ6 796 aa20.68■□□□□ 0.9
PDLIM2-207ENST00000409417 TAC4Q86UU9 113 aa20.68■□□□□ 0.9
PDLIM2-207ENST00000409417 PHF13Q86YI8 300 aaPredicted RBP20.68■□□□□ 0.9
PDLIM2-207ENST00000409417 VSTM4Q8IW00 320 aa20.68■□□□□ 0.9
PDLIM2-207ENST00000409417 OLIG1Q8TAK6 271 aa20.68■□□□□ 0.9
PDLIM2-207ENST00000409417 ADAM32Q8TC27 787 aa20.68■□□□□ 0.9
PDLIM2-207ENST00000409417 C11orf70Q9BRQ4 267 aa20.68■□□□□ 0.9
PDLIM2-207ENST00000409417 STOML2Q9UJZ1 356 aa20.68■□□□□ 0.9
PDLIM2-207ENST00000409417 BZW2Q9Y6E2 419 aaKnown RBP20.68■□□□□ 0.9
PDLIM2-207ENST00000409417 HOXC11O43248 304 aaPredicted RBP20.67■□□□□ 0.9
PDLIM2-207ENST00000409417 LATS1O95835 1130 aa20.67■□□□□ 0.9
PDLIM2-207ENST00000409417 CASP14P31944 242 aa20.67■□□□□ 0.9
PDLIM2-207ENST00000409417 NOS2P35228 1153 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms