RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 LINC00597Q9H2U6 94 aa21.19■□□□□ 0.98
PTCD3-202ENST00000409326 PIAS3Q9Y6X2 628 aa21.19■□□□□ 0.98
PTCD3-202ENST00000409326 OTOL1A6NHN0 477 aaPredicted RBP21.18■□□□□ 0.98
PTCD3-202ENST00000409326 MSI1O43347 362 aaKnown RBP21.18■□□□□ 0.98
PTCD3-202ENST00000409326 GPR37L1O60883 481 aa21.18■□□□□ 0.98
PTCD3-202ENST00000409326 GRAP2O75791 330 aa21.18■□□□□ 0.98
PTCD3-202ENST00000409326 NFATC1O95644 943 aa21.18■□□□□ 0.98
PTCD3-202ENST00000409326 CALB1P05937 261 aa21.18■□□□□ 0.98
PTCD3-202ENST00000409326 KPNA1P52294 538 aaPredicted RBP21.18■□□□□ 0.98
PTCD3-202ENST00000409326 GSCP56915 257 aaPredicted RBP21.18■□□□□ 0.98
PTCD3-202ENST00000409326 STARD6P59095 220 aa21.18■□□□□ 0.98
PTCD3-202ENST00000409326 NNTQ13423 1086 aa21.18■□□□□ 0.98
PTCD3-202ENST00000409326 TRIP4Q15650 581 aaPredicted RBP21.18■□□□□ 0.98
PTCD3-202ENST00000409326 ACAD10Q6JQN1 1059 aa21.18■□□□□ 0.98
PTCD3-202ENST00000409326 Q6ZNB5 142 aa21.18■□□□□ 0.98
PTCD3-202ENST00000409326 TPRG1Q6ZUI0 275 aa21.18■□□□□ 0.98
PTCD3-202ENST00000409326 MON1BQ7L1V2 547 aa21.18■□□□□ 0.98
PTCD3-202ENST00000409326 TMC6Q7Z403 805 aa21.18■□□□□ 0.98
PTCD3-202ENST00000409326 BMP8AQ7Z5Y6 402 aa21.18■□□□□ 0.98
PTCD3-202ENST00000409326 TAC4Q86UU9 113 aa21.18■□□□□ 0.98
PTCD3-202ENST00000409326 DEFB106AQ8N104 65 aa21.18■□□□□ 0.98
PTCD3-202ENST00000409326 SERPINB11Q96P15 392 aa21.18■□□□□ 0.98
PTCD3-202ENST00000409326 DNAJC7Q99615 494 aa21.18■□□□□ 0.98
PTCD3-202ENST00000409326 DDX23Q9BUQ8 820 aaKnown RBP21.18■□□□□ 0.98
PTCD3-202ENST00000409326 DCLK3Q9C098 648 aa21.18■□□□□ 0.98
PTCD3-202ENST00000409326 C8orf33Q9H7E9 229 aaPredicted RBP21.18■□□□□ 0.98
PTCD3-202ENST00000409326 ECT2Q9H8V3 914 aa21.18■□□□□ 0.98
PTCD3-202ENST00000409326 ADAM22Q9P0K1 906 aa21.18■□□□□ 0.98
PTCD3-202ENST00000409326 WDR35Q9P2L0 1181 aa21.18■□□□□ 0.98
PTCD3-202ENST00000409326 ZNF510Q9Y2H8 683 aa21.18■□□□□ 0.98
PTCD3-202ENST00000409326 KIAA1549LQ6ZVL6 1849 aa21.18■□□□□ 0.98
PTCD3-202ENST00000409326 FAM86C2PA6NEL3 165 aa21.17■□□□□ 0.98
PTCD3-202ENST00000409326 DDX3XO00571 662 aaKnown RBP eCLIP21.17■□□□□ 0.986e-15■■■■□ 25.2
PTCD3-202ENST00000409326 MFAP3LO75121 409 aa21.17■□□□□ 0.98
PTCD3-202ENST00000409326 PDGFBP01127 241 aaPredicted RBP21.17■□□□□ 0.98
PTCD3-202ENST00000409326 IGLV3-25P01717 112 aa21.17■□□□□ 0.98
PTCD3-202ENST00000409326 IGLV3-27P01718 113 aa21.17■□□□□ 0.98
PTCD3-202ENST00000409326 CORO1AP31146 461 aaKnown RBP21.17■□□□□ 0.98
PTCD3-202ENST00000409326 C1QBPQ07021 282 aaKnown RBP21.17■□□□□ 0.98
PTCD3-202ENST00000409326 TBX2Q13207 712 aaPredicted RBP21.17■□□□□ 0.98
PTCD3-202ENST00000409326 DCAF6Q58WW2 860 aa21.17■□□□□ 0.98
PTCD3-202ENST00000409326 ADGRG2Q8IZP9 1017 aa21.17■□□□□ 0.98
PTCD3-202ENST00000409326 OR8K1Q8NGG5 319 aa21.17■□□□□ 0.98
PTCD3-202ENST00000409326 TTC8Q8TAM2 541 aa21.17■□□□□ 0.98
PTCD3-202ENST00000409326 KMT2EQ8IZD2 1858 aa21.16■□□□□ 0.98
PTCD3-202ENST00000409326 SHISA7A6NL88 538 aa21.16■□□□□ 0.98
PTCD3-202ENST00000409326 GOLGA8SH3BPF8 625 aa21.16■□□□□ 0.98
PTCD3-202ENST00000409326 TRUB2O95900 331 aaKnown RBP21.16■□□□□ 0.98
PTCD3-202ENST00000409326 KLKB1P03952 638 aa21.16■□□□□ 0.98
PTCD3-202ENST00000409326 GZMAP12544 262 aa21.16■□□□□ 0.98
PTCD3-202ENST00000409326 CTHP32929 405 aa21.16■□□□□ 0.98
PTCD3-202ENST00000409326 NOS2P35228 1153 aa21.16■□□□□ 0.98
PTCD3-202ENST00000409326 MATKP42679 507 aa21.16■□□□□ 0.98
PTCD3-202ENST00000409326 SOX9P48436 509 aa21.16■□□□□ 0.98
PTCD3-202ENST00000409326 RING1Q06587 406 aa21.16■□□□□ 0.98
PTCD3-202ENST00000409326 TMEM31Q5JXX7 168 aa21.16■□□□□ 0.98
PTCD3-202ENST00000409326 C1orf228Q6PIY5 440 aa21.16■□□□□ 0.98
PTCD3-202ENST00000409326 ARCQ7LC44 396 aa21.16■□□□□ 0.98
PTCD3-202ENST00000409326 VPS36Q86VN1 386 aa21.16■□□□□ 0.98
PTCD3-202ENST00000409326 RALGPS2Q86X27 583 aaPredicted RBP21.16■□□□□ 0.98
PTCD3-202ENST00000409326 DRC7Q8IY82 874 aa21.16■□□□□ 0.98
PTCD3-202ENST00000409326 ADAM32Q8TC27 787 aa21.16■□□□□ 0.98
PTCD3-202ENST00000409326 MFSD1Q9H3U5 465 aa21.16■□□□□ 0.98
PTCD3-202ENST00000409326 TBC1D17Q9HA65 648 aa21.16■□□□□ 0.98
PTCD3-202ENST00000409326 ABHD10Q9NUJ1 306 aa21.16■□□□□ 0.98
PTCD3-202ENST00000409326 TAS2R14Q9NYV8 317 aa21.16■□□□□ 0.98
PTCD3-202ENST00000409326 TMEM59LQ9UK28 342 aa21.16■□□□□ 0.98
PTCD3-202ENST00000409326 TLR6Q9Y2C9 796 aa21.16■□□□□ 0.98
PTCD3-202ENST00000409326 ZDBF2Q9HCK1 2354 aa21.16■□□□□ 0.98
PTCD3-202ENST00000409326 PRR33A8MZF0 331 aa21.15■□□□□ 0.98
PTCD3-202ENST00000409326 SPECC1L-ADORA2AF8WAN1 911 aa21.15■□□□□ 0.98
PTCD3-202ENST00000409326 MAN2B1O00754 1011 aa21.15■□□□□ 0.98
PTCD3-202ENST00000409326 IRAK2O43187 625 aa21.15■□□□□ 0.98
PTCD3-202ENST00000409326 CYP17A1P05093 508 aa21.15■□□□□ 0.98
PTCD3-202ENST00000409326 PLEKP08567 350 aaPredicted RBP21.15■□□□□ 0.98
PTCD3-202ENST00000409326 HARS2P49590 506 aaKnown RBP21.15■□□□□ 0.98
PTCD3-202ENST00000409326 TBX4P57082 545 aa21.15■□□□□ 0.98
PTCD3-202ENST00000409326 RNASE9P60153 205 aaKnown RBP21.15■□□□□ 0.98
PTCD3-202ENST00000409326 PITX1P78337 314 aaPredicted RBP21.15■□□□□ 0.98
PTCD3-202ENST00000409326 CDK17Q00537 523 aa21.15■□□□□ 0.98
PTCD3-202ENST00000409326 NR1H3Q13133 447 aa21.15■□□□□ 0.98
PTCD3-202ENST00000409326 DHCR24Q15392 516 aa21.15■□□□□ 0.98
PTCD3-202ENST00000409326 NUGGCQ68CJ6 796 aa21.15■□□□□ 0.98
PTCD3-202ENST00000409326 CWF19L1Q69YN2 538 aaKnown RBP21.15■□□□□ 0.98
PTCD3-202ENST00000409326 CNGA4Q8IV77 575 aa21.15■□□□□ 0.98
PTCD3-202ENST00000409326 MCOLN2Q8IZK6 566 aa21.15■□□□□ 0.98
PTCD3-202ENST00000409326 PBXIP1Q96AQ6 731 aa21.15■□□□□ 0.98
PTCD3-202ENST00000409326 METTL5Q9NRN9 209 aaKnown RBP21.15■□□□□ 0.98
PTCD3-202ENST00000409326 RRN3Q9NYV6 651 aa21.15■□□□□ 0.98
PTCD3-202ENST00000409326 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.15■□□□□ 0.98
PTCD3-202ENST00000409326 ARHGAP20Q9P2F6 1191 aa21.15■□□□□ 0.98
PTCD3-202ENST00000409326 AGO1Q9UL18 857 aaKnown RBP21.15■□□□□ 0.98
PTCD3-202ENST00000409326 KANSL1LA0AUZ9 987 aa21.14■□□□□ 0.97
PTCD3-202ENST00000409326 LATS1O95835 1130 aa21.14■□□□□ 0.97
PTCD3-202ENST00000409326 ADH1CP00326 375 aa21.14■□□□□ 0.97
PTCD3-202ENST00000409326 GJA4P35212 333 aa21.14■□□□□ 0.97
PTCD3-202ENST00000409326 ADKP55263 362 aaKnown RBP21.14■□□□□ 0.97
PTCD3-202ENST00000409326 AMPD2Q01433 879 aa21.14■□□□□ 0.97
PTCD3-202ENST00000409326 EIF4EBP2Q13542 120 aaPredicted RBP21.14■□□□□ 0.97
PTCD3-202ENST00000409326 RHBDF2Q6PJF5 856 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms