RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 ZNF528Q3MIS6 628 aa18.74■□□□□ 0.59
PDLIM2-206ENST00000409141 TAF3Q5VWG9 929 aa18.74■□□□□ 0.59
PDLIM2-206ENST00000409141 TSSK4Q6SA08 328 aa18.74■□□□□ 0.59
PDLIM2-206ENST00000409141 C12orf40Q86WS4 652 aa18.74■□□□□ 0.59
PDLIM2-206ENST00000409141 C1orf131Q8NDD1 294 aaKnown RBP18.74■□□□□ 0.59
PDLIM2-206ENST00000409141 SPAG5Q96R06 1193 aa18.74■□□□□ 0.59
PDLIM2-206ENST00000409141 ERGIC2Q96RQ1 377 aa18.74■□□□□ 0.59
PDLIM2-206ENST00000409141 CPXM1Q96SM3 734 aa18.74■□□□□ 0.59
PDLIM2-206ENST00000409141 BBS2Q9BXC9 721 aa18.74■□□□□ 0.59
PDLIM2-206ENST00000409141 PRMT8Q9NR22 394 aaPredicted RBP18.74■□□□□ 0.59
PDLIM2-206ENST00000409141 WDR35Q9P2L0 1181 aa18.74■□□□□ 0.59
PDLIM2-206ENST00000409141 AGO1Q9UL18 857 aaKnown RBP18.74■□□□□ 0.59
PDLIM2-206ENST00000409141 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.73■□□□□ 0.59
PDLIM2-206ENST00000409141 NEDD8-MDP1E9PL57 170 aa18.73■□□□□ 0.59
PDLIM2-206ENST00000409141 CAPN9O14815 690 aa18.73■□□□□ 0.59
PDLIM2-206ENST00000409141 MSI1O43347 362 aaKnown RBP18.73■□□□□ 0.59
PDLIM2-206ENST00000409141 ATG13O75143 517 aa18.73■□□□□ 0.59
PDLIM2-206ENST00000409141 GFPT2O94808 682 aa18.73■□□□□ 0.59
PDLIM2-206ENST00000409141 CHKAP35790 457 aa18.73■□□□□ 0.59
PDLIM2-206ENST00000409141 HARS2P49590 506 aaKnown RBP18.73■□□□□ 0.59
PDLIM2-206ENST00000409141 SNX16P57768 344 aa18.73■□□□□ 0.59
PDLIM2-206ENST00000409141 SATB1Q01826 763 aa18.73■□□□□ 0.59
PDLIM2-206ENST00000409141 FILIP1LQ4L180 1135 aa18.73■□□□□ 0.59
PDLIM2-206ENST00000409141 MSANTD2Q6P1R3 559 aa18.73■□□□□ 0.59
PDLIM2-206ENST00000409141 CCDC26Q8TAB7 109 aa18.73■□□□□ 0.59
PDLIM2-206ENST00000409141 EZH1Q92800 747 aaPredicted RBP18.73■□□□□ 0.59
PDLIM2-206ENST00000409141 TRIM62Q9BVG3 475 aa18.73■□□□□ 0.59
PDLIM2-206ENST00000409141 SYNCQ9H7C4 482 aa18.73■□□□□ 0.59
PDLIM2-206ENST00000409141 TJP2Q9UDY2 1190 aa18.73■□□□□ 0.59
PDLIM2-206ENST00000409141 NAALADL1Q9UQQ1 740 aa18.73■□□□□ 0.59
PDLIM2-206ENST00000409141 MYOFQ9NZM1 2061 aa18.73■□□□□ 0.59
PDLIM2-206ENST00000409141 APODP05090 189 aa18.72■□□□□ 0.59
PDLIM2-206ENST00000409141 FYNP06241 537 aa18.72■□□□□ 0.59
PDLIM2-206ENST00000409141 SOX5P35711 763 aa18.72■□□□□ 0.59
PDLIM2-206ENST00000409141 NBL1P41271 181 aa18.72■□□□□ 0.59
PDLIM2-206ENST00000409141 STAT1P42224 750 aa18.72■□□□□ 0.59
PDLIM2-206ENST00000409141 YWHAZP63104 245 aaKnown RBP18.72■□□□□ 0.59
PDLIM2-206ENST00000409141 KDSRQ06136 332 aa18.72■□□□□ 0.59
PDLIM2-206ENST00000409141 ZSCAN23Q3MJ62 389 aa18.72■□□□□ 0.59
PDLIM2-206ENST00000409141 PKN3Q6P5Z2 889 aa18.72■□□□□ 0.59
PDLIM2-206ENST00000409141 NOP9Q86U38 636 aaKnown RBP18.72■□□□□ 0.59
PDLIM2-206ENST00000409141 TMEM35BQ8NCS4 154 aa18.72■□□□□ 0.59
PDLIM2-206ENST00000409141 XPO6Q96QU8 1125 aaKnown RBP18.72■□□□□ 0.59
PDLIM2-206ENST00000409141 POPDC2Q9HBU9 364 aa18.72■□□□□ 0.59
PDLIM2-206ENST00000409141 CBX8Q9HC52 389 aa18.72■□□□□ 0.59
PDLIM2-206ENST00000409141 RTN4Q9NQC3 1192 aaKnown RBP18.72■□□□□ 0.59
PDLIM2-206ENST00000409141 ARHGEF4Q9NR80 690 aa18.72■□□□□ 0.59
PDLIM2-206ENST00000409141 MARK1Q9P0L2 795 aa18.72■□□□□ 0.59
PDLIM2-206ENST00000409141 DEC1Q9P2X7 70 aa18.72■□□□□ 0.59
PDLIM2-206ENST00000409141 K7EQS6 105 aa18.71■□□□□ 0.59
PDLIM2-206ENST00000409141 TEX33O43247 280 aa18.71■□□□□ 0.59
PDLIM2-206ENST00000409141 TULP3O75386 442 aa18.71■□□□□ 0.59
PDLIM2-206ENST00000409141 KAT7O95251 611 aa18.71■□□□□ 0.59
PDLIM2-206ENST00000409141 TYRP14679 529 aa18.71■□□□□ 0.59
PDLIM2-206ENST00000409141 GRIA2P42262 883 aa18.71■□□□□ 0.59
PDLIM2-206ENST00000409141 SEC13P55735 322 aa18.71■□□□□ 0.59
PDLIM2-206ENST00000409141 JAM2P57087 298 aa18.71■□□□□ 0.59
PDLIM2-206ENST00000409141 OR6B2Q6IFH4 312 aa18.71■□□□□ 0.59
PDLIM2-206ENST00000409141 ETFBKMTQ8IXQ9 262 aa18.71■□□□□ 0.59
PDLIM2-206ENST00000409141 RPLP0P6Q8NHW5 317 aa18.71■□□□□ 0.59
PDLIM2-206ENST00000409141 IPO4Q8TEX9 1081 aaKnown RBP18.71■□□□□ 0.59
PDLIM2-206ENST00000409141 DDX1Q92499 740 aaKnown RBP18.71■□□□□ 0.59
PDLIM2-206ENST00000409141 BHMTQ93088 406 aa18.71■□□□□ 0.59
PDLIM2-206ENST00000409141 C2orf42Q9NWW7 574 aa18.71■□□□□ 0.59
PDLIM2-206ENST00000409141 R4GN57 208 aa18.71■□□□□ 0.59
PDLIM2-206ENST00000409141 CHURC1-FNTBB4DL54 471 aa18.71■□□□□ 0.59
PDLIM2-206ENST00000409141 CAVIN2O95810 425 aa18.71■□□□□ 0.59
PDLIM2-206ENST00000409141 TBX4P57082 545 aa18.71■□□□□ 0.59
PDLIM2-206ENST00000409141 TPM4P67936 248 aa18.71■□□□□ 0.59
PDLIM2-206ENST00000409141 MESP2Q0VG99 397 aa18.71■□□□□ 0.59
PDLIM2-206ENST00000409141 TAF5Q15542 800 aa18.71■□□□□ 0.59
PDLIM2-206ENST00000409141 PREPLQ4J6C6 727 aaPredicted RBP18.71■□□□□ 0.59
PDLIM2-206ENST00000409141 EFHC1Q5JVL4 640 aa18.71■□□□□ 0.59
PDLIM2-206ENST00000409141 SYPL2Q5VXT5 272 aa18.71■□□□□ 0.59
PDLIM2-206ENST00000409141 ZC3H14Q6PJT7 736 aaKnown RBP18.71■□□□□ 0.59
PDLIM2-206ENST00000409141 BEND5Q7L4P6 421 aa18.71■□□□□ 0.59
PDLIM2-206ENST00000409141 LUZP1Q86V48 1076 aa18.71■□□□□ 0.59
PDLIM2-206ENST00000409141 EPS8L1Q8TE68 723 aa18.71■□□□□ 0.59
PDLIM2-206ENST00000409141 DQX1Q8TE96 717 aaKnown RBP18.71■□□□□ 0.59
PDLIM2-206ENST00000409141 DNAJC17Q9NVM6 304 aaKnown RBP18.71■□□□□ 0.59
PDLIM2-206ENST00000409141 PLK2Q9NYY3 685 aa18.71■□□□□ 0.59
PDLIM2-206ENST00000409141 A0A0A0MRY4 1105 aa18.7■□□□□ 0.58
PDLIM2-206ENST00000409141 TBC1D3BA6NDS4 549 aa18.7■□□□□ 0.58
PDLIM2-206ENST00000409141 PAPSS2O95340 614 aaPredicted RBP18.7■□□□□ 0.58
PDLIM2-206ENST00000409141 SERPINC1P01008 464 aa18.7■□□□□ 0.58
PDLIM2-206ENST00000409141 ERBB2P04626 1255 aa18.7■□□□□ 0.58
PDLIM2-206ENST00000409141 MMEP08473 750 aa18.7■□□□□ 0.58
PDLIM2-206ENST00000409141 CDH5P33151 784 aaPredicted RBP18.7■□□□□ 0.58
PDLIM2-206ENST00000409141 NRLP54845 237 aa18.7■□□□□ 0.58
PDLIM2-206ENST00000409141 PTPN20Q4JDL3 420 aa18.7■□□□□ 0.58
PDLIM2-206ENST00000409141 C2orf27AQ580R0 203 aa18.7■□□□□ 0.58
PDLIM2-206ENST00000409141 NUDT18Q6ZVK8 323 aa18.7■□□□□ 0.58
PDLIM2-206ENST00000409141 FAM183BPQ6ZVS7 135 aa18.7■□□□□ 0.58
PDLIM2-206ENST00000409141 CACNA2D4Q7Z3S7 1137 aa18.7■□□□□ 0.58
PDLIM2-206ENST00000409141 ZNF677Q86XU0 584 aa18.7■□□□□ 0.58
PDLIM2-206ENST00000409141 UNC45BQ8IWX7 931 aa18.7■□□□□ 0.58
PDLIM2-206ENST00000409141 CPXM2Q8N436 756 aa18.7■□□□□ 0.58
PDLIM2-206ENST00000409141 ATRIPQ8WXE1 791 aa18.7■□□□□ 0.58
PDLIM2-206ENST00000409141 PIWIL1Q96J94 861 aaKnown RBP18.7■□□□□ 0.58
PDLIM2-206ENST00000409141 SERPINB11Q96P15 392 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms