RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 EVPLLA8MZ36 301 aa18.16■□□□□ 0.5
SMPD4-202ENST00000409031 INPP4BO15327 924 aa18.16■□□□□ 0.5
SMPD4-202ENST00000409031 BIRC5O15392 142 aa18.16■□□□□ 0.5
SMPD4-202ENST00000409031 FASTKQ14296 549 aaKnown RBP18.16■□□□□ 0.5
SMPD4-202ENST00000409031 LPCAT4Q643R3 524 aa18.16■□□□□ 0.5
SMPD4-202ENST00000409031 NLGN1Q8N2Q7 840 aa18.16■□□□□ 0.5
SMPD4-202ENST00000409031 RNF149Q8NC42 400 aa18.16■□□□□ 0.5
SMPD4-202ENST00000409031 S100ZQ8WXG8 99 aa18.16■□□□□ 0.5
SMPD4-202ENST00000409031 MTERF3Q96E29 417 aa18.16■□□□□ 0.5
SMPD4-202ENST00000409031 NSMCE2Q96MF7 247 aa18.16■□□□□ 0.5
SMPD4-202ENST00000409031 PPP1R16BQ96T49 567 aa18.16■□□□□ 0.5
SMPD4-202ENST00000409031 NMUR2Q9GZQ4 415 aa18.16■□□□□ 0.5
SMPD4-202ENST00000409031 ERVK-5Q9HDB9 667 aa18.16■□□□□ 0.5
SMPD4-202ENST00000409031 LGALS13Q9UHV8 139 aa18.16■□□□□ 0.5
SMPD4-202ENST00000409031 ITGA2BP08514 1039 aa18.16■□□□□ 0.5
SMPD4-202ENST00000409031 IL12RB1P42701 662 aa18.16■□□□□ 0.5
SMPD4-202ENST00000409031 GRIK3Q13003 919 aa18.16■□□□□ 0.5
SMPD4-202ENST00000409031 NAB1Q13506 487 aa18.16■□□□□ 0.5
SMPD4-202ENST00000409031 GRTP1Q5TC63 336 aa18.16■□□□□ 0.5
SMPD4-202ENST00000409031 ALYREFQ86V81 257 aaKnown RBP18.16■□□□□ 0.5
SMPD4-202ENST00000409031 LRRC57Q8N9N7 239 aa18.16■□□□□ 0.5
SMPD4-202ENST00000409031 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.16■□□□□ 0.5
SMPD4-202ENST00000409031 TMEM143Q96AN5 459 aa18.16■□□□□ 0.5
SMPD4-202ENST00000409031 ZNF317Q96PQ6 595 aaPredicted RBP18.16■□□□□ 0.5
SMPD4-202ENST00000409031 CADM1Q9BY67 442 aaKnown RBP18.16■□□□□ 0.5
SMPD4-202ENST00000409031 IMPAD1Q9NX62 359 aa18.16■□□□□ 0.5
SMPD4-202ENST00000409031 RAB26Q9ULW5 256 aa18.16■□□□□ 0.5
SMPD4-202ENST00000409031 CHKBQ9Y259 395 aa18.16■□□□□ 0.5
SMPD4-202ENST00000409031 LRRC42Q9Y546 428 aa18.16■□□□□ 0.5
SMPD4-202ENST00000409031 JCADQ9P266 1359 aa18.16■□□□□ 0.5
SMPD4-202ENST00000409031 GPR75-ASB3A0A0A6YYF3 556 aa18.16■□□□□ 0.5
SMPD4-202ENST00000409031 PDZK1P1A8MUH7 402 aa18.16■□□□□ 0.5
SMPD4-202ENST00000409031 RBP1P09455 135 aa18.16■□□□□ 0.5
SMPD4-202ENST00000409031 ATP6V1E1P36543 226 aa18.16■□□□□ 0.5
SMPD4-202ENST00000409031 ABRAXAS1Q6UWZ7 409 aa18.16■□□□□ 0.5
SMPD4-202ENST00000409031 TLK2Q86UE8 772 aa18.16■□□□□ 0.5
SMPD4-202ENST00000409031 TRIM62Q9BVG3 475 aa18.16■□□□□ 0.5
SMPD4-202ENST00000409031 SIK2Q9H0K1 926 aa18.16■□□□□ 0.5
SMPD4-202ENST00000409031 ZNF180Q9UJW8 692 aa18.16■□□□□ 0.5
SMPD4-202ENST00000409031 PPRC1Q5VV67 1664 aaKnown RBP18.16■□□□□ 0.5
SMPD4-202ENST00000409031 DFFAO00273 331 aa18.16■□□□□ 0.5
SMPD4-202ENST00000409031 LIASO43766 372 aa18.16■□□□□ 0.5
SMPD4-202ENST00000409031 FAM98BQ52LJ0 330 aaKnown RBP18.16■□□□□ 0.5
SMPD4-202ENST00000409031 SPDYAQ5MJ70 313 aa18.16■□□□□ 0.5
SMPD4-202ENST00000409031 DNAAF2Q9NVR5 837 aaKnown RBP18.16■□□□□ 0.5
SMPD4-202ENST00000409031 CYP2C8P10632 490 aa18.15■□□□□ 0.5
SMPD4-202ENST00000409031 CYP24A1Q07973 514 aa18.15■□□□□ 0.5
SMPD4-202ENST00000409031 SPANXN2Q5MJ10 180 aa18.15■□□□□ 0.5
SMPD4-202ENST00000409031 SLC10A5Q5PT55 438 aa18.15■□□□□ 0.5
SMPD4-202ENST00000409031 SEPT1Q8WYJ6 367 aa18.15■□□□□ 0.5
SMPD4-202ENST00000409031 VPS33AQ96AX1 596 aa18.15■□□□□ 0.5
SMPD4-202ENST00000409031 UBE2OQ9C0C9 1292 aaKnown RBP18.15■□□□□ 0.5
SMPD4-202ENST00000409031 SP110Q9HB58 689 aa18.15■□□□□ 0.5
SMPD4-202ENST00000409031 CASS4Q9NQ75 786 aa18.15■□□□□ 0.5
SMPD4-202ENST00000409031 OLA1Q9NTK5 396 aaKnown RBP18.15■□□□□ 0.5
SMPD4-202ENST00000409031 TPRKBQ9Y3C4 175 aa18.15■□□□□ 0.5
SMPD4-202ENST00000409031 PRR5-ARHGAP8B1AHC4 643 aa18.15■□□□□ 0.5
SMPD4-202ENST00000409031 RNF103O00237 685 aa18.15■□□□□ 0.5
SMPD4-202ENST00000409031 DDX3YO15523 660 aaKnown RBP18.15■□□□□ 0.5
SMPD4-202ENST00000409031 PEX11AO75192 247 aa18.15■□□□□ 0.5
SMPD4-202ENST00000409031 ACADSBP45954 432 aa18.15■□□□□ 0.5
SMPD4-202ENST00000409031 NAA20P61599 178 aa18.15■□□□□ 0.5
SMPD4-202ENST00000409031 ARHGAP8P85298 464 aa18.15■□□□□ 0.5
SMPD4-202ENST00000409031 DPYSL3Q14195 570 aa18.15■□□□□ 0.5
SMPD4-202ENST00000409031 LRRC38Q5VT99 294 aa18.15■□□□□ 0.5
SMPD4-202ENST00000409031 UCMAQ8WVF2 138 aa18.15■□□□□ 0.5
SMPD4-202ENST00000409031 KIF12Q96FN5 646 aa18.15■□□□□ 0.5
SMPD4-202ENST00000409031 CAPN8A6NHC0 703 aa18.15■□□□□ 0.5
SMPD4-202ENST00000409031 PTPN7P35236 360 aa18.15■□□□□ 0.5
SMPD4-202ENST00000409031 CCNA1P78396 465 aa18.15■□□□□ 0.5
SMPD4-202ENST00000409031 IL5RAQ01344 420 aa18.15■□□□□ 0.5
SMPD4-202ENST00000409031 TAS2R42Q7RTR8 314 aa18.15■□□□□ 0.5
SMPD4-202ENST00000409031 ALLCQ8N6M5 410 aa18.15■□□□□ 0.5
SMPD4-202ENST00000409031 REXO4Q9GZR2 422 aaKnown RBP18.15■□□□□ 0.5
SMPD4-202ENST00000409031 KCNH7Q9NS40 1196 aa18.15■□□□□ 0.5
SMPD4-202ENST00000409031 TMEM94Q12767 1356 aa18.15■□□□□ 0.5
SMPD4-202ENST00000409031 A0A1W2PPM1 405 aa18.15■□□□□ 0.5
SMPD4-202ENST00000409031 APOC4-APOC2K7ER74 178 aa18.15■□□□□ 0.5
SMPD4-202ENST00000409031 APOC2P02655 101 aa18.15■□□□□ 0.5
SMPD4-202ENST00000409031 PYGLP06737 847 aa18.15■□□□□ 0.5
SMPD4-202ENST00000409031 ST13P50502 369 aaKnown RBP18.15■□□□□ 0.5
SMPD4-202ENST00000409031 MAPK10P53779 464 aa18.15■□□□□ 0.5
SMPD4-202ENST00000409031 EPS8Q12929 822 aa18.15■□□□□ 0.5
SMPD4-202ENST00000409031 USP4Q13107 963 aa18.15■□□□□ 0.5
SMPD4-202ENST00000409031 SLC15A2Q16348 729 aa18.15■□□□□ 0.5
SMPD4-202ENST00000409031 PERM1Q5SV97 790 aa18.15■□□□□ 0.5
SMPD4-202ENST00000409031 BROXQ5VW32 411 aa18.15■□□□□ 0.5
SMPD4-202ENST00000409031 ARL10Q8N8L6 244 aa18.15■□□□□ 0.5
SMPD4-202ENST00000409031 RDM1Q8NG50 284 aa18.15■□□□□ 0.5
SMPD4-202ENST00000409031 RP9Q8TA86 221 aaKnown RBP18.15■□□□□ 0.5
SMPD4-202ENST00000409031 KCTD14Q9BQ13 255 aaPredicted RBP18.15■□□□□ 0.5
SMPD4-202ENST00000409031 TARS2Q9BW92 718 aaKnown RBP18.15■□□□□ 0.5
SMPD4-202ENST00000409031 TDRD3Q9H7E2 651 aaKnown RBP18.15■□□□□ 0.5
SMPD4-202ENST00000409031 PRR23D1E9PI22 279 aaPredicted RBP18.14■□□□□ 0.49
SMPD4-202ENST00000409031 MAP3K6O95382 1288 aa18.14■□□□□ 0.49
SMPD4-202ENST00000409031 CAPN1P07384 714 aa18.14■□□□□ 0.49
SMPD4-202ENST00000409031 PRR23D2P0DMB1 279 aaPredicted RBP18.14■□□□□ 0.49
SMPD4-202ENST00000409031 EMC2Q15006 297 aa18.14■□□□□ 0.49
SMPD4-202ENST00000409031 STX19Q8N4C7 294 aa18.14■□□□□ 0.49
SMPD4-202ENST00000409031 SETD9Q8NE22 299 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms