RNA–Protein interactions for RNA: ENST00000407595.2

CCDC85A-201, Transcript of coiled-coil domain containing 85A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC85A, Length 3,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85A-201ENST00000407595 PGLYRP2Q96PD5 576 aa16.23■□□□□ 0.19
CCDC85A-201ENST00000407595 APOL2Q9BQE5 337 aa16.23■□□□□ 0.19
CCDC85A-201ENST00000407595 MECRQ9BV79 373 aa16.23■□□□□ 0.19
CCDC85A-201ENST00000407595 NUF2Q9BZD4 464 aa16.23■□□□□ 0.19
CCDC85A-201ENST00000407595 PRDM5Q9NQX1 630 aaPredicted RBP16.23■□□□□ 0.19
CCDC85A-201ENST00000407595 PACSIN3Q9UKS6 424 aa16.23■□□□□ 0.19
CCDC85A-201ENST00000407595 CEP290O15078 2479 aa16.23■□□□□ 0.19
CCDC85A-201ENST00000407595 DFFAO00273 331 aa16.23■□□□□ 0.19
CCDC85A-201ENST00000407595 TREHO43280 583 aa16.23■□□□□ 0.19
CCDC85A-201ENST00000407595 LIASO43766 372 aa16.23■□□□□ 0.19
CCDC85A-201ENST00000407595 DGKIO75912 1065 aa16.23■□□□□ 0.19
CCDC85A-201ENST00000407595 RABGGTBP53611 331 aa16.23■□□□□ 0.19
CCDC85A-201ENST00000407595 RNF217Q8TC41 542 aa16.23■□□□□ 0.19
CCDC85A-201ENST00000407595 PDCD6IPQ8WUM4 868 aaKnown RBP16.23■□□□□ 0.19
CCDC85A-201ENST00000407595 SNRNP27Q8WVK2 155 aaKnown RBP16.23■□□□□ 0.19
CCDC85A-201ENST00000407595 CCDC97Q96F63 343 aaPredicted RBP16.23■□□□□ 0.19
CCDC85A-201ENST00000407595 SYT15Q9BQS2 421 aa16.23■□□□□ 0.19
CCDC85A-201ENST00000407595 SPON2Q9BUD6 331 aa16.23■□□□□ 0.19
CCDC85A-201ENST00000407595 CADM1Q9BY67 442 aaKnown RBP16.23■□□□□ 0.19
CCDC85A-201ENST00000407595 B3GNT5Q9BYG0 378 aa16.23■□□□□ 0.19
CCDC85A-201ENST00000407595 BCAP29Q9UHQ4 241 aa16.23■□□□□ 0.19
CCDC85A-201ENST00000407595 SHOC2Q9UQ13 582 aa16.23■□□□□ 0.19
CCDC85A-201ENST00000407595 A0A0G2JLL6 359 aaPredicted RBP16.23■□□□□ 0.19
CCDC85A-201ENST00000407595 APOL1O14791 398 aa16.23■□□□□ 0.19
CCDC85A-201ENST00000407595 SMIM10L2AP0DMW4 78 aa16.23■□□□□ 0.19
CCDC85A-201ENST00000407595 SMIM10L2BP0DMW5 78 aa16.23■□□□□ 0.19
CCDC85A-201ENST00000407595 PSEN2P49810 448 aa16.23■□□□□ 0.19
CCDC85A-201ENST00000407595 MAMLD1Q13495 774 aa16.23■□□□□ 0.19
CCDC85A-201ENST00000407595 PRRT2Q7Z6L0 340 aaPredicted RBP16.23■□□□□ 0.19
CCDC85A-201ENST00000407595 GLIS1Q8NBF1 620 aa16.23■□□□□ 0.19
CCDC85A-201ENST00000407595 SRPK1Q96SB4 655 aaKnown RBP16.23■□□□□ 0.19
CCDC85A-201ENST00000407595 KATNAL1Q9BW62 490 aa16.23■□□□□ 0.19
CCDC85A-201ENST00000407595 PPCSQ9HAB8 311 aa16.23■□□□□ 0.19
CCDC85A-201ENST00000407595 DDIT4Q9NX09 232 aa16.23■□□□□ 0.19
CCDC85A-201ENST00000407595 NOCTQ9UK39 431 aaKnown RBP16.23■□□□□ 0.19
CCDC85A-201ENST00000407595 MAFBQ9Y5Q3 323 aaPredicted RBP16.23■□□□□ 0.19
CCDC85A-201ENST00000407595 EFHC2Q5JST6 749 aa16.22■□□□□ 0.19
CCDC85A-201ENST00000407595 IYDQ6PHW0 289 aa16.22■□□□□ 0.19
CCDC85A-201ENST00000407595 NDRG1Q92597 394 aaKnown RBP16.22■□□□□ 0.19
CCDC85A-201ENST00000407595 LPIN3Q9BQK8 851 aa16.22■□□□□ 0.19
CCDC85A-201ENST00000407595 TXLNGYQ9BZA5 131 aa16.22■□□□□ 0.19
CCDC85A-201ENST00000407595 PCDH9Q9HC56 1237 aa16.22■□□□□ 0.19
CCDC85A-201ENST00000407595 USP18Q9UMW8 372 aa16.22■□□□□ 0.19
CCDC85A-201ENST00000407595 WASF2Q9Y6W5 498 aa16.22■□□□□ 0.19
CCDC85A-201ENST00000407595 MYPNQ86TC9 1320 aa16.22■□□□□ 0.19
CCDC85A-201ENST00000407595 ANKRD36CQ5JPF3 1778 aa16.22■□□□□ 0.19
CCDC85A-201ENST00000407595 TM9SF1O15321 606 aa16.22■□□□□ 0.19
CCDC85A-201ENST00000407595 THEM5Q8N1Q8 247 aa16.22■□□□□ 0.19
CCDC85A-201ENST00000407595 CRYGNQ8WXF5 182 aa16.22■□□□□ 0.19
CCDC85A-201ENST00000407595 C12orf42Q96LP6 360 aa16.22■□□□□ 0.19
CCDC85A-201ENST00000407595 TADA2AO75478 443 aa16.22■□□□□ 0.19
CCDC85A-201ENST00000407595 NFIL3Q16649 462 aa16.22■□□□□ 0.19
CCDC85A-201ENST00000407595 CYP1B1Q16678 543 aa16.22■□□□□ 0.19
CCDC85A-201ENST00000407595 ARL13BQ3SXY8 428 aa16.22■□□□□ 0.19
CCDC85A-201ENST00000407595 TCHHL1Q5QJ38 904 aaPredicted RBP16.22■□□□□ 0.19
CCDC85A-201ENST00000407595 ADGRF2Q8IZF7 708 aa16.22■□□□□ 0.19
CCDC85A-201ENST00000407595 NMUR2Q9GZQ4 415 aa16.22■□□□□ 0.19
CCDC85A-201ENST00000407595 AVENQ9NQS1 362 aaPredicted RBP16.22■□□□□ 0.19
CCDC85A-201ENST00000407595 AAASQ9NRG9 546 aa16.22■□□□□ 0.19
CCDC85A-201ENST00000407595 WDR35Q9P2L0 1181 aa16.22■□□□□ 0.19
CCDC85A-201ENST00000407595 WFS1O76024 890 aa16.21■□□□□ 0.19
CCDC85A-201ENST00000407595 CD4P01730 458 aa16.21■□□□□ 0.19
CCDC85A-201ENST00000407595 VDRP11473 427 aa16.21■□□□□ 0.19
CCDC85A-201ENST00000407595 ACSBG2Q5FVE4 666 aa16.21■□□□□ 0.19
CCDC85A-201ENST00000407595 TTC39BQ5VTQ0 682 aaPredicted RBP16.21■□□□□ 0.19
CCDC85A-201ENST00000407595 BTBD8Q5XKL5 378 aa16.21■□□□□ 0.19
CCDC85A-201ENST00000407595 SLC27A1Q6PCB7 646 aa16.21■□□□□ 0.19
CCDC85A-201ENST00000407595 MTHFD1LQ6UB35 978 aa16.21■□□□□ 0.19
CCDC85A-201ENST00000407595 CCDC117Q8IWD4 279 aaPredicted RBP16.21■□□□□ 0.19
CCDC85A-201ENST00000407595 JOSD2Q8TAC2 188 aa16.21■□□□□ 0.19
CCDC85A-201ENST00000407595 GTF3C2Q8WUA4 911 aaPredicted RBP16.21■□□□□ 0.19
CCDC85A-201ENST00000407595 PIDD1Q9HB75 910 aa16.21■□□□□ 0.19
CCDC85A-201ENST00000407595 ZNF711Q9Y462 761 aa16.21■□□□□ 0.19
CCDC85A-201ENST00000407595 SMCHD1A6NHR9 2005 aa16.21■□□□□ 0.19
CCDC85A-201ENST00000407595 ZBBXA8MT70 800 aa16.21■□□□□ 0.19
CCDC85A-201ENST00000407595 HNRNPCP07910 306 aaKnown RBP eCLIP16.21■□□□□ 0.19
CCDC85A-201ENST00000407595 MLH1P40692 756 aa16.21■□□□□ 0.19
CCDC85A-201ENST00000407595 SLC25A3Q00325 362 aa16.21■□□□□ 0.19
CCDC85A-201ENST00000407595 MMRN1Q13201 1228 aa16.21■□□□□ 0.19
CCDC85A-201ENST00000407595 PPP1R15BQ5SWA1 713 aa16.21■□□□□ 0.19
CCDC85A-201ENST00000407595 MIB1Q86YT6 1006 aa16.21■□□□□ 0.19
CCDC85A-201ENST00000407595 KATNAL2Q8IYT4 538 aa16.21■□□□□ 0.19
CCDC85A-201ENST00000407595 RYBPQ8N488 228 aaPredicted RBP16.21■□□□□ 0.19
CCDC85A-201ENST00000407595 PGBD4Q96DM1 585 aa16.21■□□□□ 0.19
CCDC85A-201ENST00000407595 TJP2Q9UDY2 1190 aa16.21■□□□□ 0.19
CCDC85A-201ENST00000407595 ASS1P00966 412 aaKnown RBP16.21■□□□□ 0.19
CCDC85A-201ENST00000407595 SMPD1P17405 629 aa16.21■□□□□ 0.19
CCDC85A-201ENST00000407595 FCGRTP55899 365 aa16.21■□□□□ 0.19
CCDC85A-201ENST00000407595 RPL10AP62906 217 aaKnown RBP16.21■□□□□ 0.19
CCDC85A-201ENST00000407595 ZC3H15Q8WU90 426 aaKnown RBP16.21■□□□□ 0.19
CCDC85A-201ENST00000407595 DDX18Q9NVP1 670 aaKnown RBP16.21■□□□□ 0.19
CCDC85A-201ENST00000407595 DNAJC16Q9Y2G8 782 aa16.21■□□□□ 0.19
CCDC85A-201ENST00000407595 CLDN5O00501 218 aa16.2■□□□□ 0.18
CCDC85A-201ENST00000407595 SCAMP3O14828 347 aaKnown RBP16.2■□□□□ 0.18
CCDC85A-201ENST00000407595 ENO3P13929 434 aaPredicted RBP16.2■□□□□ 0.18
CCDC85A-201ENST00000407595 MIPP30301 263 aa16.2■□□□□ 0.18
CCDC85A-201ENST00000407595 ARL2P36404 184 aa16.2■□□□□ 0.18
CCDC85A-201ENST00000407595 GARSP41250 739 aaKnown RBP16.2■□□□□ 0.18
CCDC85A-201ENST00000407595 SCNN1GP51170 649 aa16.2■□□□□ 0.18
CCDC85A-201ENST00000407595 NOMO3P69849 1222 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms