RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 PAX7P23759 505 aa10.21□□□□□ -0.78
MSH2-202ENST00000406134 GMPRP36959 345 aa10.21□□□□□ -0.78
MSH2-202ENST00000406134 BST1Q10588 318 aa10.21□□□□□ -0.78
MSH2-202ENST00000406134 PDK2Q15119 407 aa10.21□□□□□ -0.78
MSH2-202ENST00000406134 ZNF618Q5T7W0 954 aa10.21□□□□□ -0.78
MSH2-202ENST00000406134 STEAP4Q687X5 459 aa10.21□□□□□ -0.78
MSH2-202ENST00000406134 OR6B2Q6IFH4 312 aa10.21□□□□□ -0.78
MSH2-202ENST00000406134 MTHFD1LQ6UB35 978 aa10.21□□□□□ -0.78
MSH2-202ENST00000406134 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.21□□□□□ -0.78
MSH2-202ENST00000406134 PYROXD2Q8N2H3 581 aa10.21□□□□□ -0.78
MSH2-202ENST00000406134 C18orf25Q96B23 403 aaPredicted RBP10.21□□□□□ -0.78
MSH2-202ENST00000406134 CCDC106Q9BWC9 280 aa10.21□□□□□ -0.78
MSH2-202ENST00000406134 SYNCQ9H7C4 482 aa10.21□□□□□ -0.78
MSH2-202ENST00000406134 TMPRSS4Q9NRS4 437 aa10.21□□□□□ -0.78
MSH2-202ENST00000406134 DONSONQ9NYP3 566 aa10.21□□□□□ -0.78
MSH2-202ENST00000406134 ERAP1Q9NZ08 941 aa10.21□□□□□ -0.78
MSH2-202ENST00000406134 HEY1Q9Y5J3 304 aa10.21□□□□□ -0.78
MSH2-202ENST00000406134 IQANK1A0A1B0GTG1 560 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 RBM47A0AV96 593 aaKnown RBP10.2□□□□□ -0.78
MSH2-202ENST00000406134 ALDH1A2O94788 518 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 APOEP02649 317 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 MYL2P10916 166 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 YWHAGP61981 247 aaKnown RBP eCLIP10.2□□□□□ -0.78
MSH2-202ENST00000406134 SATB1Q01826 763 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 BLMHQ13867 455 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 ACOT1Q86TX2 421 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 EXOC8Q8IYI6 725 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 C7orf26Q96N11 449 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 QKIQ96PU8 341 aaKnown RBP eCLIP10.2□□□□□ -0.786e-6■■■■■ 32.9
MSH2-202ENST00000406134 MMP19Q99542 508 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 CDHR5Q9HBB8 845 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 FAM49BQ9NUQ9 324 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 DOCK3Q8IZD9 2030 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 CFAP69A5D8W1 941 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 SPDYE5A6NIY4 337 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 APOL1O14791 398 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 SPTLC1O15269 473 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 SLC25A27O95847 323 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 ALDOAP04075 364 aaKnown RBP10.2□□□□□ -0.78
MSH2-202ENST00000406134 CYP2F1P24903 491 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 CLNS1AP54105 237 aaKnown RBP10.2□□□□□ -0.78
MSH2-202ENST00000406134 ZNF792Q3KQV3 632 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 ARMCX2Q7L311 632 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 DPH6Q7L8W6 267 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 KBTBD2Q8IY47 623 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 NETO2Q8NC67 525 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 AFG1LQ8WV93 481 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 EMID1Q96A84 441 aaPredicted RBP10.2□□□□□ -0.78
MSH2-202ENST00000406134 NT5C1AQ9BXI3 368 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 EIF2AQ9BY44 585 aaKnown RBP10.2□□□□□ -0.78
MSH2-202ENST00000406134 ADAMTS10Q9H324 1103 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 DTLQ9NZJ0 730 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 SUFUQ9UMX1 484 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 RPL26L1Q9UNX3 145 aaKnown RBP10.2□□□□□ -0.78
MSH2-202ENST00000406134 DCAF8L1A6NGE4 600 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 E7ENQ6 273 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 H7C0C1 242 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 I6L893 689 aaPredicted RBP10.2□□□□□ -0.78
MSH2-202ENST00000406134 FCHO1O14526 889 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 SKAP2O75563 359 aaPredicted RBP10.2□□□□□ -0.78
MSH2-202ENST00000406134 SPAG6O75602 509 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 LINGO3P0C6S8 592 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 TPSB2P20231 275 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 IGFBP6P24592 240 aaPredicted RBP10.2□□□□□ -0.78
MSH2-202ENST00000406134 PHKA2P46019 1235 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 ATP5OP48047 213 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 PITX1P78337 314 aaPredicted RBP10.2□□□□□ -0.78
MSH2-202ENST00000406134 SEMA5AQ13591 1074 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 KPNB1Q14974 876 aaKnown RBP10.2□□□□□ -0.78
MSH2-202ENST00000406134 TPSAB1Q15661 275 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 NBPF20Q3BBV1 942 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 ZNF484Q5JVG2 852 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 PPM1NQ8N819 430 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 SNX27Q96L92 541 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 NUDCD1Q96RS6 583 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 TRIM55Q9BYV6 548 aa10.2□□□□□ -0.78
MSH2-202ENST00000406134 ZC3H7BQ9UGR2 993 aaKnown RBP10.2□□□□□ -0.78
MSH2-202ENST00000406134 PRPSAP2O60256 369 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 KRT36O76013 467 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 UPP2O95045 317 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 APRTP07741 180 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 HOXD8P13378 290 aaPredicted RBP10.19□□□□□ -0.78
MSH2-202ENST00000406134 OSBPP22059 807 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 GRM5P41594 1212 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 ARFIP2P53365 341 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 TP53INP2Q8IXH6 220 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 NAF1Q96HR8 494 aaKnown RBP10.19□□□□□ -0.78
MSH2-202ENST00000406134 ZNF333Q96JL9 665 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 ACAP3Q96P50 834 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 CSPG4P5Q96PW8 444 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 EBNA1BP2Q99848 306 aaKnown RBP10.19□□□□□ -0.78
MSH2-202ENST00000406134 EBF4Q9BQW3 602 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 FAM124BQ9H5Z6 455 aaPredicted RBP10.19□□□□□ -0.78
MSH2-202ENST00000406134 ANLNQ9NQW6 1124 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 PCDHA11Q9Y5I1 949 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 PSAT1Q9Y617 370 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 ZNF195O14628 629 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 TRDMT1O14717 391 aaKnown RBP10.19□□□□□ -0.78
MSH2-202ENST00000406134 HAUS5O94927 633 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 AMPD1P23109 780 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms