RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 RNPEPQ9H4A4 650 aa14.46□□□□□ -0.09
DUSP28-202ENST00000405954 RPAP3Q9H6T3 665 aaPredicted RBP14.46□□□□□ -0.09
DUSP28-202ENST00000405954 XPO7Q9UIA9 1087 aaKnown RBP14.46□□□□□ -0.09
DUSP28-202ENST00000405954 CAB39Q9Y376 341 aaPredicted RBP14.46□□□□□ -0.09
DUSP28-202ENST00000405954 LRP6O75581 1613 aa14.46□□□□□ -0.1
DUSP28-202ENST00000405954 FBXO21O94952 628 aa14.46□□□□□ -0.1
DUSP28-202ENST00000405954 SNRPAP09012 282 aaKnown RBP14.46□□□□□ -0.1
DUSP28-202ENST00000405954 POLR2EP19388 210 aaKnown RBP14.46□□□□□ -0.1
DUSP28-202ENST00000405954 CLK3P49761 638 aaKnown RBP14.46□□□□□ -0.1
DUSP28-202ENST00000405954 MFAP3P55082 362 aa14.46□□□□□ -0.1
DUSP28-202ENST00000405954 NANOGP8Q6NSW7 305 aa14.46□□□□□ -0.1
DUSP28-202ENST00000405954 CYP2R1Q6VVX0 501 aa14.46□□□□□ -0.1
DUSP28-202ENST00000405954 AMIGO3Q86WK7 504 aa14.46□□□□□ -0.1
DUSP28-202ENST00000405954 SLC15A4Q8N697 577 aa14.46□□□□□ -0.1
DUSP28-202ENST00000405954 BANPQ8N9N5 519 aa14.46□□□□□ -0.1
DUSP28-202ENST00000405954 TMEM47Q9BQJ4 181 aa14.46□□□□□ -0.1
DUSP28-202ENST00000405954 HIPK3Q9H422 1215 aa14.46□□□□□ -0.1
DUSP28-202ENST00000405954 ZC4H2Q9NQZ6 224 aa14.46□□□□□ -0.1
DUSP28-202ENST00000405954 EXOC7Q9UPT5 735 aa14.46□□□□□ -0.1
DUSP28-202ENST00000405954 ERVK-11Q9UQG0 969 aa14.46□□□□□ -0.1
DUSP28-202ENST00000405954 GOLGA8IPA6NC78 632 aa14.45□□□□□ -0.1
DUSP28-202ENST00000405954 GOLGA8JA6NMD2 632 aa14.45□□□□□ -0.1
DUSP28-202ENST00000405954 TOR1BO14657 336 aa14.45□□□□□ -0.1
DUSP28-202ENST00000405954 TMEM191BP0C7N4 346 aa14.45□□□□□ -0.1
DUSP28-202ENST00000405954 RFC4P35249 363 aa14.45□□□□□ -0.1
DUSP28-202ENST00000405954 TCF7P36402 384 aaPredicted RBP14.45□□□□□ -0.1
DUSP28-202ENST00000405954 JAM2P57087 298 aa14.45□□□□□ -0.1
DUSP28-202ENST00000405954 NSUN2Q08J23 767 aaKnown RBP eCLIP14.45□□□□□ -0.1
DUSP28-202ENST00000405954 PICALMQ13492 652 aa14.45□□□□□ -0.1
DUSP28-202ENST00000405954 ADGRE1Q14246 886 aa14.45□□□□□ -0.1
DUSP28-202ENST00000405954 MORF4L2Q15014 288 aa14.45□□□□□ -0.1
DUSP28-202ENST00000405954 VWA5B1Q5TIE3 1220 aa14.45□□□□□ -0.1
DUSP28-202ENST00000405954 NEPROQ6NW34 567 aa14.45□□□□□ -0.1
DUSP28-202ENST00000405954 PRR23BQ6ZRT6 265 aa14.45□□□□□ -0.1
DUSP28-202ENST00000405954 AKAP14Q86UN6 197 aa14.45□□□□□ -0.1
DUSP28-202ENST00000405954 CD209Q9NNX6 404 aa14.45□□□□□ -0.1
DUSP28-202ENST00000405954 SIX2Q9NPC8 291 aa14.45□□□□□ -0.1
DUSP28-202ENST00000405954 GNPTGQ9UJJ9 305 aa14.45□□□□□ -0.1
DUSP28-202ENST00000405954 FIS1Q9Y3D6 152 aa14.45□□□□□ -0.1
DUSP28-202ENST00000405954 BCL9O00512 1426 aa14.45□□□□□ -0.1
DUSP28-202ENST00000405954 SYCE1LA8MT33 242 aa14.45□□□□□ -0.1
DUSP28-202ENST00000405954 TMX2-CTNND1H3BSU7 103 aa14.45□□□□□ -0.1
DUSP28-202ENST00000405954 ZBTB48P10074 688 aaPredicted RBP14.45□□□□□ -0.1
DUSP28-202ENST00000405954 NR4A2P43354 598 aa14.45□□□□□ -0.1
DUSP28-202ENST00000405954 COG2Q14746 738 aa14.45□□□□□ -0.1
DUSP28-202ENST00000405954 GRM4Q14833 912 aa14.45□□□□□ -0.1
DUSP28-202ENST00000405954 C16orf89Q6UX73 402 aa14.45□□□□□ -0.1
DUSP28-202ENST00000405954 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.45□□□□□ -0.1
DUSP28-202ENST00000405954 FAM156AQ8NDB6 213 aa14.45□□□□□ -0.1
DUSP28-202ENST00000405954 BPIFB6Q8NFQ5 453 aa14.45□□□□□ -0.1
DUSP28-202ENST00000405954 KLC2Q9H0B6 622 aa14.45□□□□□ -0.1
DUSP28-202ENST00000405954 CALCAP01258 141 aa14.45□□□□□ -0.1
DUSP28-202ENST00000405954 PHC1P78364 1004 aa14.45□□□□□ -0.1
DUSP28-202ENST00000405954 CDKL1Q00532 357 aa14.45□□□□□ -0.1
DUSP28-202ENST00000405954 ZFP1Q6P2D0 407 aa14.45□□□□□ -0.1
DUSP28-202ENST00000405954 C16orf46Q6P387 395 aa14.45□□□□□ -0.1
DUSP28-202ENST00000405954 TRAF7Q6Q0C0 670 aa14.45□□□□□ -0.1
DUSP28-202ENST00000405954 SNX32Q86XE0 403 aa14.45□□□□□ -0.1
DUSP28-202ENST00000405954 LRRC47Q8N1G4 583 aaKnown RBP14.45□□□□□ -0.1
DUSP28-202ENST00000405954 GLIS1Q8NBF1 620 aa14.45□□□□□ -0.1
DUSP28-202ENST00000405954 HSPH1Q92598 858 aa14.45□□□□□ -0.1
DUSP28-202ENST00000405954 SMARCAD1Q9H4L7 1026 aa14.45□□□□□ -0.1
DUSP28-202ENST00000405954 HMG20AQ9NP66 347 aa14.45□□□□□ -0.1
DUSP28-202ENST00000405954 SOX11P35716 441 aa14.44□□□□□ -0.1
DUSP28-202ENST00000405954 MARSP56192 900 aaKnown RBP14.44□□□□□ -0.1
DUSP28-202ENST00000405954 CAMK2BQ13554 666 aa14.44□□□□□ -0.1
DUSP28-202ENST00000405954 PHKG1Q16816 387 aa14.44□□□□□ -0.1
DUSP28-202ENST00000405954 AARS2Q5JTZ9 985 aaKnown RBP14.44□□□□□ -0.1
DUSP28-202ENST00000405954 TDRPQ86YL5 185 aa14.44□□□□□ -0.1
DUSP28-202ENST00000405954 PIWIL2Q8TC59 973 aaKnown RBP14.44□□□□□ -0.1
DUSP28-202ENST00000405954 SERAC1Q96JX3 654 aa14.44□□□□□ -0.1
DUSP28-202ENST00000405954 DACH2Q96NX9 599 aa14.44□□□□□ -0.1
DUSP28-202ENST00000405954 OLFM1Q99784 485 aa14.44□□□□□ -0.1
DUSP28-202ENST00000405954 PKP2Q99959 881 aa14.44□□□□□ -0.1
DUSP28-202ENST00000405954 COQ10BQ9H8M1 238 aa14.44□□□□□ -0.1
DUSP28-202ENST00000405954 WDR6Q9NNW5 1121 aaKnown RBP14.44□□□□□ -0.1
DUSP28-202ENST00000405954 CCDC162PA2VCL2 907 aa14.44□□□□□ -0.1
DUSP28-202ENST00000405954 FAM155BO75949 473 aa14.44□□□□□ -0.1
DUSP28-202ENST00000405954 NAT2P11245 290 aa14.44□□□□□ -0.1
DUSP28-202ENST00000405954 IVDP26440 423 aa14.44□□□□□ -0.1
DUSP28-202ENST00000405954 SLC18A1P54219 525 aa14.44□□□□□ -0.1
DUSP28-202ENST00000405954 LLGL2Q6P1M3 1020 aa14.44□□□□□ -0.1
DUSP28-202ENST00000405954 C4orf22Q6V702 233 aa14.44□□□□□ -0.1
DUSP28-202ENST00000405954 SLC30A10Q6XR72 485 aa14.44□□□□□ -0.1
DUSP28-202ENST00000405954 ZNF804AQ7Z570 1209 aa14.44□□□□□ -0.1
DUSP28-202ENST00000405954 KYQ8NBH2 561 aa14.44□□□□□ -0.1
DUSP28-202ENST00000405954 C17orf80Q9BSJ5 609 aa14.44□□□□□ -0.1
DUSP28-202ENST00000405954 UPF3AQ9H1J1 476 aaKnown RBP14.44□□□□□ -0.1
DUSP28-202ENST00000405954 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.44□□□□□ -0.1
DUSP28-202ENST00000405954 SHANK3Q9BYB0 1731 aa14.44□□□□□ -0.1
DUSP28-202ENST00000405954 PARP4Q9UKK3 1724 aaKnown RBP14.44□□□□□ -0.1
DUSP28-202ENST00000405954 MYH11P35749 1972 aa14.43□□□□□ -0.1
DUSP28-202ENST00000405954 SLC16A3O15427 465 aaKnown RBP14.43□□□□□ -0.1
DUSP28-202ENST00000405954 FARP2O94887 1054 aaPredicted RBP14.43□□□□□ -0.1
DUSP28-202ENST00000405954 HIBADHP31937 336 aaKnown RBP14.43□□□□□ -0.1
DUSP28-202ENST00000405954 MAP3K7CLP57077 242 aa14.43□□□□□ -0.1
DUSP28-202ENST00000405954 TAF5Q15542 800 aa14.43□□□□□ -0.1
DUSP28-202ENST00000405954 OGFRL1Q5TC84 451 aaPredicted RBP14.43□□□□□ -0.1
DUSP28-202ENST00000405954 LRRC8EQ6NSJ5 796 aa14.43□□□□□ -0.1
DUSP28-202ENST00000405954 NOP9Q86U38 636 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms