RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 CDH6P55285 790 aa21.86■■□□□ 1.09
TPM1-208ENST00000404484 SLC7A5Q01650 507 aa21.86■■□□□ 1.09
TPM1-208ENST00000404484 CCDC137Q6PK04 289 aaKnown RBP21.86■■□□□ 1.09
TPM1-208ENST00000404484 HFE2Q6ZVN8 426 aa21.86■■□□□ 1.09
TPM1-208ENST00000404484 BNIPLQ7Z465 357 aa21.86■■□□□ 1.09
TPM1-208ENST00000404484 ZDHHC14Q8IZN3 488 aa21.86■■□□□ 1.09
TPM1-208ENST00000404484 ATAD1Q8NBU5 361 aa21.86■■□□□ 1.09
TPM1-208ENST00000404484 GRK7Q8WTQ7 553 aa21.86■■□□□ 1.09
TPM1-208ENST00000404484 PGAP3Q96FM1 320 aaPredicted RBP21.86■■□□□ 1.09
TPM1-208ENST00000404484 SPATA17Q96L03 361 aa21.86■■□□□ 1.09
TPM1-208ENST00000404484 VN1R3Q9BXE9 311 aa21.86■■□□□ 1.09
TPM1-208ENST00000404484 FRMD8P1Q9BZ68 369 aaPredicted RBP21.86■■□□□ 1.09
TPM1-208ENST00000404484 RAB17Q9H0T7 212 aa21.86■■□□□ 1.09
TPM1-208ENST00000404484 IGFLR1Q9H665 355 aa21.86■■□□□ 1.09
TPM1-208ENST00000404484 DMGDHQ9UI17 866 aaKnown RBP21.86■■□□□ 1.09
TPM1-208ENST00000404484 SCML2Q9UQR0 700 aa21.86■■□□□ 1.09
TPM1-208ENST00000404484 M0QYT0 321 aa21.85■■□□□ 1.09
TPM1-208ENST00000404484 HAPLN1P10915 354 aaPredicted RBP21.85■■□□□ 1.09
TPM1-208ENST00000404484 COILP38432 576 aaPredicted RBP21.85■■□□□ 1.09
TPM1-208ENST00000404484 CREMQ03060 361 aa21.85■■□□□ 1.09
TPM1-208ENST00000404484 DEUP1Q05D60 604 aa21.85■■□□□ 1.09
TPM1-208ENST00000404484 TFDP2Q14188 446 aa21.85■■□□□ 1.09
TPM1-208ENST00000404484 COL19A1Q14993 1142 aa21.85■■□□□ 1.09
TPM1-208ENST00000404484 CCNG2Q16589 344 aa21.85■■□□□ 1.09
TPM1-208ENST00000404484 PLPP4Q5VZY2 271 aa21.85■■□□□ 1.09
TPM1-208ENST00000404484 BSPRYQ5W0U4 402 aa21.85■■□□□ 1.09
TPM1-208ENST00000404484 KAZNQ674X7 775 aa21.85■■□□□ 1.09
TPM1-208ENST00000404484 PDE12Q6L8Q7 609 aaKnown RBP21.85■■□□□ 1.09
TPM1-208ENST00000404484 RSPO2Q6UXX9 243 aaPredicted RBP21.85■■□□□ 1.09
TPM1-208ENST00000404484 TMC7Q7Z402 723 aa21.85■■□□□ 1.09
TPM1-208ENST00000404484 RBM23Q86U06 439 aaKnown RBP21.85■■□□□ 1.09
TPM1-208ENST00000404484 VPS52Q8N1B4 723 aa21.85■■□□□ 1.09
TPM1-208ENST00000404484 TTC13Q8NBP0 860 aa21.85■■□□□ 1.09
TPM1-208ENST00000404484 HDAC7Q8WUI4 952 aa21.85■■□□□ 1.09
TPM1-208ENST00000404484 HNRNPLLQ8WVV9 542 aaKnown RBP21.85■■□□□ 1.09
TPM1-208ENST00000404484 ATXN2LQ8WWM7 1075 aaKnown RBP21.85■■□□□ 1.09
TPM1-208ENST00000404484 SNRNP25Q9BV90 132 aaKnown RBP21.85■■□□□ 1.09
TPM1-208ENST00000404484 CALN1Q9BXU9 219 aa21.85■■□□□ 1.09
TPM1-208ENST00000404484 ABCC13Q9NSE7 274 aa21.85■■□□□ 1.09
TPM1-208ENST00000404484 HSFX1Q9UBD0 423 aa21.85■■□□□ 1.09
TPM1-208ENST00000404484 NAALADL1Q9UQQ1 740 aa21.85■■□□□ 1.09
TPM1-208ENST00000404484 UTP11Q9Y3A2 253 aaKnown RBP21.85■■□□□ 1.09
TPM1-208ENST00000404484 FYNP06241 537 aa21.84■■□□□ 1.09
TPM1-208ENST00000404484 TFE3P19532 575 aaPredicted RBP21.84■■□□□ 1.09
TPM1-208ENST00000404484 ARSEP51690 589 aa21.84■■□□□ 1.09
TPM1-208ENST00000404484 YWHAGP61981 247 aaKnown RBP eCLIP21.84■■□□□ 1.09
TPM1-208ENST00000404484 ROR1Q01973 937 aa21.84■■□□□ 1.09
TPM1-208ENST00000404484 LLGL1Q15334 1064 aa21.84■■□□□ 1.09
TPM1-208ENST00000404484 MGAT5BQ3V5L5 792 aa21.84■■□□□ 1.09
TPM1-208ENST00000404484 SYPL2Q5VXT5 272 aa21.84■■□□□ 1.09
TPM1-208ENST00000404484 TPGS2Q68CL5 300 aa21.84■■□□□ 1.09
TPM1-208ENST00000404484 TMCO3Q6UWJ1 677 aa21.84■■□□□ 1.09
TPM1-208ENST00000404484 RNF19BQ6ZMZ0 732 aa21.84■■□□□ 1.09
TPM1-208ENST00000404484 BBS12Q6ZW61 710 aa21.84■■□□□ 1.09
TPM1-208ENST00000404484 SND1Q7KZF4 910 aaKnown RBP eCLIP21.84■■□□□ 1.09
TPM1-208ENST00000404484 CCDC105Q8IYK2 499 aa21.84■■□□□ 1.09
TPM1-208ENST00000404484 SCAMP5Q8TAC9 235 aa21.84■■□□□ 1.09
TPM1-208ENST00000404484 SLC7A14Q8TBB6 771 aa21.84■■□□□ 1.09
TPM1-208ENST00000404484 ZNF670Q9BS34 389 aa21.84■■□□□ 1.09
TPM1-208ENST00000404484 HERPUD2Q9BSE4 406 aa21.84■■□□□ 1.09
TPM1-208ENST00000404484 MAK16Q9BXY0 300 aaKnown RBP21.84■■□□□ 1.09
TPM1-208ENST00000404484 DCLK3Q9C098 648 aa21.84■■□□□ 1.09
TPM1-208ENST00000404484 ARFGAP3Q9NP61 516 aa21.84■■□□□ 1.09
TPM1-208ENST00000404484 ENTPD7Q9NQZ7 604 aa21.84■■□□□ 1.09
TPM1-208ENST00000404484 GDF3Q9NR23 364 aa21.84■■□□□ 1.09
TPM1-208ENST00000404484 HIDE1A8MVS5 230 aa21.83■■□□□ 1.09
TPM1-208ENST00000404484 PER2O15055 1255 aa21.83■■□□□ 1.09
TPM1-208ENST00000404484 KRT10P13645 584 aa21.83■■□□□ 1.09
TPM1-208ENST00000404484 TUFMP49411 452 aaKnown RBP21.83■■□□□ 1.09
TPM1-208ENST00000404484 CLCN6P51797 869 aa21.83■■□□□ 1.09
TPM1-208ENST00000404484 GUCY2DQ02846 1103 aa21.83■■□□□ 1.09
TPM1-208ENST00000404484 LMNB2Q03252 620 aa21.83■■□□□ 1.09
TPM1-208ENST00000404484 DPYSL2Q16555 572 aa21.83■■□□□ 1.09
TPM1-208ENST00000404484 DDR2Q16832 855 aa21.83■■□□□ 1.09
TPM1-208ENST00000404484 CTC1Q2NKJ3 1217 aa21.83■■□□□ 1.09
TPM1-208ENST00000404484 BTBD8Q5XKL5 378 aa21.83■■□□□ 1.09
TPM1-208ENST00000404484 DENND5BQ6ZUT9 1274 aa21.83■■□□□ 1.09
TPM1-208ENST00000404484 SYDE1Q6ZW31 735 aaPredicted RBP21.83■■□□□ 1.09
TPM1-208ENST00000404484 MON1AQ86VX9 555 aa21.83■■□□□ 1.09
TPM1-208ENST00000404484 EIF1ADQ8N9N8 165 aaKnown RBP21.83■■□□□ 1.09
TPM1-208ENST00000404484 FAM71BQ8TC56 605 aa21.83■■□□□ 1.09
TPM1-208ENST00000404484 SLCO2A1Q92959 643 aa21.83■■□□□ 1.09
TPM1-208ENST00000404484 PABPC5Q96DU9 382 aaKnown RBP21.83■■□□□ 1.09
TPM1-208ENST00000404484 SEPT5Q99719 369 aaPredicted RBP21.83■■□□□ 1.09
TPM1-208ENST00000404484 TLE6Q9H808 572 aa21.83■■□□□ 1.09
TPM1-208ENST00000404484 UBE2ZQ9H832 354 aaPredicted RBP21.83■■□□□ 1.09
TPM1-208ENST00000404484 FAM204AQ9H8W3 233 aa21.83■■□□□ 1.09
TPM1-208ENST00000404484 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.83■■□□□ 1.09
TPM1-208ENST00000404484 IL37Q9NZH6 218 aa21.83■■□□□ 1.09
TPM1-208ENST00000404484 AFF4Q9UHB7 1163 aaKnown RBP21.83■■□□□ 1.09
TPM1-208ENST00000404484 AP4E1Q9UPM8 1137 aa21.83■■□□□ 1.09
TPM1-208ENST00000404484 SSX2IPQ9Y2D8 614 aa21.83■■□□□ 1.09
TPM1-208ENST00000404484 TTI1O43156 1089 aa21.82■■□□□ 1.08
TPM1-208ENST00000404484 GBP1P32455 592 aa21.82■■□□□ 1.08
TPM1-208ENST00000404484 OR1D2P34982 312 aa21.82■■□□□ 1.08
TPM1-208ENST00000404484 NRIP1P48552 1158 aa21.82■■□□□ 1.08
TPM1-208ENST00000404484 DPYSL3Q14195 570 aa21.82■■□□□ 1.08
TPM1-208ENST00000404484 RAB6CQ53S08 254 aa21.82■■□□□ 1.08
TPM1-208ENST00000404484 OTUD1Q5VV17 481 aaPredicted RBP21.82■■□□□ 1.08
TPM1-208ENST00000404484 DRICH1Q6PGQ1 229 aaPredicted RBP21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms