RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 ZSCAN18Q8TBC5 510 aaPredicted RBP34.72■■■■□ 3.15
CSNK1E-204ENST00000403904 RRN3Q9NYV6 651 aa34.72■■■■□ 3.15
CSNK1E-204ENST00000403904 COX16Q9P0S2 106 aa34.72■■■■□ 3.15
CSNK1E-204ENST00000403904 CALCOCO1Q9P1Z2 691 aa34.72■■■■□ 3.15
CSNK1E-204ENST00000403904 A0A0A6YYK5 440 aaPredicted RBP34.71■■■■□ 3.15
CSNK1E-204ENST00000403904 M0QYT0 321 aa34.71■■■■□ 3.15
CSNK1E-204ENST00000403904 ZNF252P-AS1Q0IIN9 211 aa34.71■■■■□ 3.15
CSNK1E-204ENST00000403904 TCEAL1Q15170 157 aa34.71■■■■□ 3.15
CSNK1E-204ENST00000403904 CDO1Q16878 200 aa34.71■■■■□ 3.15
CSNK1E-204ENST00000403904 SH3PXD2AQ5TCZ1 1133 aa34.71■■■■□ 3.15
CSNK1E-204ENST00000403904 FAM204AQ9H8W3 233 aa34.71■■■■□ 3.15
CSNK1E-204ENST00000403904 CPQQ9Y646 472 aa34.71■■■■□ 3.15
CSNK1E-204ENST00000403904 PSMA2P25787 234 aa34.7■■■■□ 3.15
CSNK1E-204ENST00000403904 PTPN9P43378 593 aa34.7■■■■□ 3.15
CSNK1E-204ENST00000403904 SLC7A9P82251 487 aa34.7■■■■□ 3.15
CSNK1E-204ENST00000403904 SMAD2Q15796 467 aaKnown RBP34.7■■■■□ 3.15
CSNK1E-204ENST00000403904 ARID3BQ8IVW6 561 aaPredicted RBP34.7■■■■□ 3.15
CSNK1E-204ENST00000403904 FNIP1Q8TF40 1166 aa34.7■■■■□ 3.15
CSNK1E-204ENST00000403904 CNPY3Q9BT09 278 aa34.7■■■■□ 3.15
CSNK1E-204ENST00000403904 GKN1Q9NS71 199 aa34.7■■■■□ 3.15
CSNK1E-204ENST00000403904 DDIT4Q9NX09 232 aa34.7■■■■□ 3.15
CSNK1E-204ENST00000403904 SLC12A8A0AV02 714 aa34.7■■■■□ 3.14
CSNK1E-204ENST00000403904 BTNL10A8MVZ5 291 aa34.7■■■■□ 3.14
CSNK1E-204ENST00000403904 MYO1FO00160 1098 aa34.7■■■■□ 3.14
CSNK1E-204ENST00000403904 DPYSL4O14531 572 aa34.7■■■■□ 3.14
CSNK1E-204ENST00000403904 CCP110O43303 1012 aa34.7■■■■□ 3.14
CSNK1E-204ENST00000403904 MTA2O94776 668 aa34.7■■■■□ 3.14
CSNK1E-204ENST00000403904 IGLV3-25P01717 112 aa34.7■■■■□ 3.14
CSNK1E-204ENST00000403904 ZXDBP98169 803 aa34.7■■■■□ 3.14
CSNK1E-204ENST00000403904 NME3Q13232 169 aa34.7■■■■□ 3.14
CSNK1E-204ENST00000403904 ZFRQ96KR1 1074 aaKnown RBP34.7■■■■□ 3.14
CSNK1E-204ENST00000403904 SERPINB11Q96P15 392 aa34.7■■■■□ 3.14
CSNK1E-204ENST00000403904 CCL26Q9Y258 94 aa34.7■■■■□ 3.14
CSNK1E-204ENST00000403904 HELZP42694 1942 aaKnown RBP34.7■■■■□ 3.14
CSNK1E-204ENST00000403904 NUP210Q8TEM1 1887 aaPredicted RBP34.69■■■■□ 3.14
CSNK1E-204ENST00000403904 BUB1O43683 1085 aa34.69■■■■□ 3.14
CSNK1E-204ENST00000403904 PRAMEF12O95522 483 aa34.69■■■■□ 3.14
CSNK1E-204ENST00000403904 RAB6CQ53S08 254 aa34.69■■■■□ 3.14
CSNK1E-204ENST00000403904 FAM78AQ5JUQ0 283 aa34.69■■■■□ 3.14
CSNK1E-204ENST00000403904 KLF16Q9BXK1 252 aaPredicted RBP34.69■■■■□ 3.14
CSNK1E-204ENST00000403904 RAB6CQ9H0N0 254 aa34.69■■■■□ 3.14
CSNK1E-204ENST00000403904 HMBSP08397 361 aa34.68■■■■□ 3.14
CSNK1E-204ENST00000403904 LAMP2P13473 410 aa34.68■■■■□ 3.14
CSNK1E-204ENST00000403904 OTOP3Q7RTS5 596 aa34.68■■■■□ 3.14
CSNK1E-204ENST00000403904 TTC16Q8NEE8 873 aa34.68■■■■□ 3.14
CSNK1E-204ENST00000403904 ST13P5Q8NFI4 369 aaPredicted RBP34.68■■■■□ 3.14
CSNK1E-204ENST00000403904 FAM172AQ8WUF8 416 aa34.68■■■■□ 3.14
CSNK1E-204ENST00000403904 USP13Q92995 863 aaPredicted RBP34.68■■■■□ 3.14
CSNK1E-204ENST00000403904 ASB16Q96NS5 453 aa34.68■■■■□ 3.14
CSNK1E-204ENST00000403904 LZTFL1Q9NQ48 299 aa34.68■■■■□ 3.14
CSNK1E-204ENST00000403904 TDP1Q9NUW8 608 aa34.68■■■■□ 3.14
CSNK1E-204ENST00000403904 IP6K2Q9UHH9 426 aa34.68■■■■□ 3.14
CSNK1E-204ENST00000403904 MACROD2A1Z1Q3 448 aa34.67■■■■□ 3.14
CSNK1E-204ENST00000403904 IRAK2O43187 625 aa34.67■■■■□ 3.14
CSNK1E-204ENST00000403904 GBP1P32455 592 aa34.67■■■■□ 3.14
CSNK1E-204ENST00000403904 ARHGAP25P42331 645 aa34.67■■■■□ 3.14
CSNK1E-204ENST00000403904 ATXN1P54253 815 aaKnown RBP34.67■■■■□ 3.14
CSNK1E-204ENST00000403904 NAP1L1P55209 391 aaKnown RBP34.67■■■■□ 3.14
CSNK1E-204ENST00000403904 CENPIQ92674 756 aaPredicted RBP34.67■■■■□ 3.14
CSNK1E-204ENST00000403904 SMARCD2Q92925 531 aa34.67■■■■□ 3.14
CSNK1E-204ENST00000403904 TRIM44Q96DX7 344 aaPredicted RBP34.67■■■■□ 3.14
CSNK1E-204ENST00000403904 TSGA10Q9BZW7 698 aa34.67■■■■□ 3.14
CSNK1E-204ENST00000403904 PIGVQ9NUD9 493 aa34.67■■■■□ 3.14
CSNK1E-204ENST00000403904 THEGQ9P2T0 379 aa34.67■■■■□ 3.14
CSNK1E-204ENST00000403904 ARHGAP26Q9UNA1 814 aa34.67■■■■□ 3.14
CSNK1E-204ENST00000403904 KRT86O43790 486 aa34.66■■■■□ 3.14
CSNK1E-204ENST00000403904 DEUP1Q05D60 604 aa34.66■■■■□ 3.14
CSNK1E-204ENST00000403904 EIF4EBP2Q13542 120 aaPredicted RBP34.66■■■■□ 3.14
CSNK1E-204ENST00000403904 PUS10Q3MIT2 529 aaKnown RBP34.66■■■■□ 3.14
CSNK1E-204ENST00000403904 BNIPLQ7Z465 357 aa34.66■■■■□ 3.14
CSNK1E-204ENST00000403904 PGAP3Q96FM1 320 aaPredicted RBP34.66■■■■□ 3.14
CSNK1E-204ENST00000403904 PHF7Q9BWX1 381 aaPredicted RBP34.66■■■■□ 3.14
CSNK1E-204ENST00000403904 GUCA1BQ9UMX6 200 aa34.66■■■■□ 3.14
CSNK1E-204ENST00000403904 PAXBP1Q9Y5B6 917 aa34.66■■■■□ 3.14
CSNK1E-204ENST00000403904 IRF1P10914 325 aa34.66■■■■□ 3.14
CSNK1E-204ENST00000403904 IL9P15248 144 aa34.66■■■■□ 3.14
CSNK1E-204ENST00000403904 HADHBP55084 474 aaKnown RBP34.66■■■■□ 3.14
CSNK1E-204ENST00000403904 COG7P83436 770 aa34.66■■■■□ 3.14
CSNK1E-204ENST00000403904 MESDQ14696 234 aa34.66■■■■□ 3.14
CSNK1E-204ENST00000403904 TRIP4Q15650 581 aaPredicted RBP34.66■■■■□ 3.14
CSNK1E-204ENST00000403904 ACSF2Q96CM8 615 aaPredicted RBP34.66■■■■□ 3.14
CSNK1E-204ENST00000403904 TRMT1Q9NXH9 659 aaKnown RBP34.66■■■■□ 3.14
CSNK1E-204ENST00000403904 USTQ9Y2C2 406 aa34.66■■■■□ 3.14
CSNK1E-204ENST00000403904 TLR6Q9Y2C9 796 aa34.66■■■■□ 3.14
CSNK1E-204ENST00000403904 HBS1LQ9Y450 684 aaKnown RBP34.66■■■■□ 3.14
CSNK1E-204ENST00000403904 ZFP37Q9Y6Q3 630 aaPredicted RBP34.66■■■■□ 3.14
CSNK1E-204ENST00000403904 TMEM110-MUSTN1A8MSY1 372 aa34.65■■■■□ 3.14
CSNK1E-204ENST00000403904 ENDOD1O94919 500 aa34.65■■■■□ 3.14
CSNK1E-204ENST00000403904 WEE1P30291 646 aa34.65■■■■□ 3.14
CSNK1E-204ENST00000403904 VIPR2P41587 438 aa34.65■■■■□ 3.14
CSNK1E-204ENST00000403904 KCNQ1P51787 676 aa34.65■■■■□ 3.14
CSNK1E-204ENST00000403904 TBX4P57082 545 aa34.65■■■■□ 3.14
CSNK1E-204ENST00000403904 PIGHQ14442 188 aaPredicted RBP34.65■■■■□ 3.14
CSNK1E-204ENST00000403904 DAB2IPQ5VWQ8 1189 aa34.65■■■■□ 3.14
CSNK1E-204ENST00000403904 ZNF662Q6ZS27 426 aa34.65■■■■□ 3.14
CSNK1E-204ENST00000403904 STRADAQ7RTN6 431 aa34.65■■■■□ 3.14
CSNK1E-204ENST00000403904 ADAMTS19Q8TE59 1207 aa34.65■■■■□ 3.14
CSNK1E-204ENST00000403904 FAM50BQ9Y247 325 aa34.65■■■■□ 3.14
CSNK1E-204ENST00000403904 ZSCAN12O43309 604 aa34.64■■■■□ 3.14
CSNK1E-204ENST00000403904 DESP17661 470 aa34.64■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms