RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 VPS36Q86VN1 386 aa17.93■□□□□ 0.46
PTCHD3P3-201ENST00000403073 ADGRG2Q8IZP9 1017 aa17.93■□□□□ 0.46
PTCHD3P3-201ENST00000403073 CSGALNACT1Q8TDX6 532 aa17.93■□□□□ 0.46
PTCHD3P3-201ENST00000403073 METTL5Q9NRN9 209 aaKnown RBP17.93■□□□□ 0.46
PTCHD3P3-201ENST00000403073 HEBP1Q9NRV9 189 aa17.93■□□□□ 0.46
PTCHD3P3-201ENST00000403073 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.93■□□□□ 0.46
PTCHD3P3-201ENST00000403073 WDR35Q9P2L0 1181 aa17.93■□□□□ 0.46
PTCHD3P3-201ENST00000403073 TMEM59LQ9UK28 342 aa17.93■□□□□ 0.46
PTCHD3P3-201ENST00000403073 HBS1LQ9Y450 684 aaKnown RBP17.93■□□□□ 0.46
PTCHD3P3-201ENST00000403073 ZNF638Q14966 1978 aaKnown RBP17.92■□□□□ 0.46
PTCHD3P3-201ENST00000403073 OTOL1A6NHN0 477 aaPredicted RBP17.92■□□□□ 0.46
PTCHD3P3-201ENST00000403073 TRUB2O95900 331 aaKnown RBP17.92■□□□□ 0.46
PTCHD3P3-201ENST00000403073 RRM1P23921 792 aa17.92■□□□□ 0.46
PTCHD3P3-201ENST00000403073 CDC25BP30305 580 aa17.92■□□□□ 0.46
PTCHD3P3-201ENST00000403073 NOS2P35228 1153 aa17.92■□□□□ 0.46
PTCHD3P3-201ENST00000403073 FLT3P36888 993 aa17.92■□□□□ 0.46
PTCHD3P3-201ENST00000403073 MATKP42679 507 aa17.92■□□□□ 0.46
PTCHD3P3-201ENST00000403073 TBX4P57082 545 aa17.92■□□□□ 0.46
PTCHD3P3-201ENST00000403073 CDK17Q00537 523 aa17.92■□□□□ 0.46
PTCHD3P3-201ENST00000403073 SIGLEC14Q08ET2 396 aa17.92■□□□□ 0.46
PTCHD3P3-201ENST00000403073 TRIP4Q15650 581 aaPredicted RBP17.92■□□□□ 0.46
PTCHD3P3-201ENST00000403073 TRNP1Q6NT89 227 aa17.92■□□□□ 0.46
PTCHD3P3-201ENST00000403073 PPP1R2P3Q6NXS1 205 aa17.92■□□□□ 0.46
PTCHD3P3-201ENST00000403073 DENND1CQ8IV53 801 aa17.92■□□□□ 0.46
PTCHD3P3-201ENST00000403073 EMC1Q8N766 993 aa17.92■□□□□ 0.46
PTCHD3P3-201ENST00000403073 KIAA1958Q8N8K9 716 aa17.92■□□□□ 0.46
PTCHD3P3-201ENST00000403073 SPC24Q8NBT2 197 aa17.92■□□□□ 0.46
PTCHD3P3-201ENST00000403073 JOSD2Q8TAC2 188 aa17.92■□□□□ 0.46
PTCHD3P3-201ENST00000403073 DNASE1L2Q92874 299 aa17.92■□□□□ 0.46
PTCHD3P3-201ENST00000403073 ISCUQ9H1K1 167 aa17.92■□□□□ 0.46
PTCHD3P3-201ENST00000403073 TRPV5Q9NQA5 729 aa17.92■□□□□ 0.46
PTCHD3P3-201ENST00000403073 TBC1D14Q9P2M4 693 aa17.92■□□□□ 0.46
PTCHD3P3-201ENST00000403073 LSM7Q9UK45 103 aaKnown RBP17.92■□□□□ 0.46
PTCHD3P3-201ENST00000403073 MYO16Q9Y6X6 1858 aa17.91■□□□□ 0.46
PTCHD3P3-201ENST00000403073 SYNJ2BP-COX16A0A087WUM0 186 aa17.91■□□□□ 0.46
PTCHD3P3-201ENST00000403073 TCRBV5S1A1TA0A578 114 aa17.91■□□□□ 0.46
PTCHD3P3-201ENST00000403073 KRBA1A5PL33 1030 aa17.91■□□□□ 0.46
PTCHD3P3-201ENST00000403073 GOLGA6L3A6NEY3 463 aa17.91■□□□□ 0.46
PTCHD3P3-201ENST00000403073 SLC9A3R1O14745 358 aaPredicted RBP17.91■□□□□ 0.46
PTCHD3P3-201ENST00000403073 KRT3P12035 628 aa17.91■□□□□ 0.46
PTCHD3P3-201ENST00000403073 TFE3P19532 575 aaPredicted RBP17.91■□□□□ 0.46
PTCHD3P3-201ENST00000403073 CORO1AP31146 461 aaKnown RBP17.91■□□□□ 0.46
PTCHD3P3-201ENST00000403073 SOX9P48436 509 aa17.91■□□□□ 0.46
PTCHD3P3-201ENST00000403073 GFPT1Q06210 699 aaPredicted RBP17.91■□□□□ 0.46
PTCHD3P3-201ENST00000403073 MAPK8IP2Q13387 824 aaPredicted RBP17.91■□□□□ 0.46
PTCHD3P3-201ENST00000403073 ASTE1Q2TB18 679 aaPredicted RBP17.91■□□□□ 0.46
PTCHD3P3-201ENST00000403073 ITPRIPL2Q3MIP1 535 aa17.91■□□□□ 0.46
PTCHD3P3-201ENST00000403073 Q6ZNB5 142 aa17.91■□□□□ 0.46
PTCHD3P3-201ENST00000403073 SIX5Q8N196 739 aa17.91■□□□□ 0.46
PTCHD3P3-201ENST00000403073 C3orf20Q8ND61 904 aa17.91■□□□□ 0.46
PTCHD3P3-201ENST00000403073 PLD4Q96BZ4 506 aa17.91■□□□□ 0.46
PTCHD3P3-201ENST00000403073 VCPIP1Q96JH7 1222 aa17.91■□□□□ 0.46
PTCHD3P3-201ENST00000403073 SERPINB11Q96P15 392 aa17.91■□□□□ 0.46
PTCHD3P3-201ENST00000403073 DDX23Q9BUQ8 820 aaKnown RBP17.91■□□□□ 0.46
PTCHD3P3-201ENST00000403073 SELENOOQ9BVL4 669 aa17.91■□□□□ 0.46
PTCHD3P3-201ENST00000403073 ADAM33Q9BZ11 813 aa17.91■□□□□ 0.46
PTCHD3P3-201ENST00000403073 ECT2Q9H8V3 914 aa17.91■□□□□ 0.46
PTCHD3P3-201ENST00000403073 FAM204AQ9H8W3 233 aa17.91■□□□□ 0.46
PTCHD3P3-201ENST00000403073 NHEJ1Q9H9Q4 299 aaPredicted RBP17.91■□□□□ 0.46
PTCHD3P3-201ENST00000403073 GRPEL1Q9HAV7 217 aa17.91■□□□□ 0.46
PTCHD3P3-201ENST00000403073 COX16Q9P0S2 106 aa17.91■□□□□ 0.46
PTCHD3P3-201ENST00000403073 AGO1Q9UL18 857 aaKnown RBP17.91■□□□□ 0.46
PTCHD3P3-201ENST00000403073 ANAPC1Q9H1A4 1944 aa17.91■□□□□ 0.46
PTCHD3P3-201ENST00000403073 M0QYT0 321 aa17.9■□□□□ 0.46
PTCHD3P3-201ENST00000403073 ATMINO43313 823 aaPredicted RBP17.9■□□□□ 0.46
PTCHD3P3-201ENST00000403073 IGLV3-25P01717 112 aa17.9■□□□□ 0.46
PTCHD3P3-201ENST00000403073 IGLV3-27P01718 113 aa17.9■□□□□ 0.46
PTCHD3P3-201ENST00000403073 RFC1P35251 1148 aaPredicted RBP17.9■□□□□ 0.46
PTCHD3P3-201ENST00000403073 HARS2P49590 506 aaKnown RBP17.9■□□□□ 0.46
PTCHD3P3-201ENST00000403073 KPNA1P52294 538 aaPredicted RBP17.9■□□□□ 0.46
PTCHD3P3-201ENST00000403073 GSCP56915 257 aaPredicted RBP17.9■□□□□ 0.46
PTCHD3P3-201ENST00000403073 NME3Q13232 169 aa17.9■□□□□ 0.46
PTCHD3P3-201ENST00000403073 ZC3H12AQ5D1E8 599 aaKnown RBP17.9■□□□□ 0.46
PTCHD3P3-201ENST00000403073 CCDC122Q5T0U0 273 aa17.9■□□□□ 0.46
PTCHD3P3-201ENST00000403073 DNAJC24Q6P3W2 148 aa17.9■□□□□ 0.46
PTCHD3P3-201ENST00000403073 RXFP2Q8WXD0 754 aa17.9■□□□□ 0.46
PTCHD3P3-201ENST00000403073 ATP2A3Q93084 1043 aa17.9■□□□□ 0.46
PTCHD3P3-201ENST00000403073 SLC39A13Q96H72 371 aa17.9■□□□□ 0.46
PTCHD3P3-201ENST00000403073 FCRL2Q96LA5 508 aaPredicted RBP17.9■□□□□ 0.46
PTCHD3P3-201ENST00000403073 CFAP57Q96MR6 1250 aa17.9■□□□□ 0.46
PTCHD3P3-201ENST00000403073 NPY6RQ99463 290 aa17.9■□□□□ 0.46
PTCHD3P3-201ENST00000403073 DCLK3Q9C098 648 aa17.9■□□□□ 0.46
PTCHD3P3-201ENST00000403073 DEF6Q9H4E7 631 aa17.9■□□□□ 0.46
PTCHD3P3-201ENST00000403073 ARHGEF3Q9NR81 526 aa17.9■□□□□ 0.46
PTCHD3P3-201ENST00000403073 DDIT4Q9NX09 232 aa17.9■□□□□ 0.46
PTCHD3P3-201ENST00000403073 CALCOCO1Q9P1Z2 691 aa17.9■□□□□ 0.46
PTCHD3P3-201ENST00000403073 TLR6Q9Y2C9 796 aa17.9■□□□□ 0.46
PTCHD3P3-201ENST00000403073 PIAS3Q9Y6X2 628 aa17.9■□□□□ 0.46
PTCHD3P3-201ENST00000403073 DENND4CQ5VZ89 1909 aa17.9■□□□□ 0.46
PTCHD3P3-201ENST00000403073 NUP210Q8TEM1 1887 aaPredicted RBP17.89■□□□□ 0.45
PTCHD3P3-201ENST00000403073 SSU72P8A0A1W2PR75 194 aa17.89■□□□□ 0.45
PTCHD3P3-201ENST00000403073 TMEM221A6NGB7 291 aa17.89■□□□□ 0.45
PTCHD3P3-201ENST00000403073 SIGLEC16A6NMB1 481 aa17.89■□□□□ 0.45
PTCHD3P3-201ENST00000403073 M0R296 226 aa17.89■□□□□ 0.45
PTCHD3P3-201ENST00000403073 IRAK2O43187 625 aa17.89■□□□□ 0.45
PTCHD3P3-201ENST00000403073 AKR1B10O60218 316 aa17.89■□□□□ 0.45
PTCHD3P3-201ENST00000403073 PDGFBP01127 241 aaPredicted RBP17.89■□□□□ 0.45
PTCHD3P3-201ENST00000403073 ABCB4P21439 1286 aa17.89■□□□□ 0.45
PTCHD3P3-201ENST00000403073 GBP1P32455 592 aa17.89■□□□□ 0.45
PTCHD3P3-201ENST00000403073 SULT1E1P49888 294 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms