RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 KCNA4P22459 653 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 TRADDQ15628 312 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 SYTL3Q4VX76 610 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 BOLA3Q53S33 107 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 ZNF484Q5JVG2 852 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 TCHHL1Q5QJ38 904 aaPredicted RBP3.35□□□□□ -1.87
KNL1-202ENST00000399668 TMC3Q7Z5M5 1100 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 PTAR1Q7Z6K3 402 aaPredicted RBP3.35□□□□□ -1.87
KNL1-202ENST00000399668 PRUNE1Q86TP1 453 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 RNF168Q8IYW5 571 aaPredicted RBP3.35□□□□□ -1.87
KNL1-202ENST00000399668 LRRC34Q8IZ02 419 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 MIER2Q8N344 545 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 B4GALNT2Q8NHY0 566 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.35□□□□□ -1.87
KNL1-202ENST00000399668 KAT5Q92993 513 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 MED8Q96G25 268 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 TMEM237Q96Q45 408 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 IKZF4Q9H2S9 585 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 ATXN3LQ9H3M9 355 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 NMRK2Q9NPI5 230 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 PSD3Q9NYI0 1048 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 DCDC2Q9UHG0 476 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 TRMT6Q9UJA5 497 aaKnown RBP3.35□□□□□ -1.87
KNL1-202ENST00000399668 SUFUQ9UMX1 484 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 AP4E1Q9UPM8 1137 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 AAR2Q9Y312 384 aaKnown RBP3.35□□□□□ -1.87
KNL1-202ENST00000399668 FAM32AQ9Y421 112 aaKnown RBP3.35□□□□□ -1.87
KNL1-202ENST00000399668 RASSF10A6NK89 507 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 TTLL13PA6NNM8 815 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 PIK3CDO00329 1044 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 CLDN5O00501 218 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 SASH3O75995 380 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 RHOBTB1O94844 696 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 ARIH2O95376 493 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 RARAP10276 462 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 VDRP11473 427 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 PBLDP30039 288 aaPredicted RBP3.35□□□□□ -1.87
KNL1-202ENST00000399668 HNRNPH1P31943 449 aaKnown RBP3.35□□□□□ -1.87
KNL1-202ENST00000399668 ADCYAP1R1P41586 468 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 SLC11A2P49281 568 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 TKTL1P51854 596 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 CORO7P57737 925 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 ABCE1P61221 599 aaKnown RBP3.35□□□□□ -1.87
KNL1-202ENST00000399668 IFI35P80217 286 aaPredicted RBP3.35□□□□□ -1.87
KNL1-202ENST00000399668 PPP3CAQ08209 521 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 DDR1Q08345 913 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 TBX2Q13207 712 aaPredicted RBP3.35□□□□□ -1.87
KNL1-202ENST00000399668 PTK6Q13882 451 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 PTGISQ16647 500 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 C15orf59Q2T9L4 293 aaPredicted RBP3.35□□□□□ -1.87
KNL1-202ENST00000399668 TMEM119Q4V9L6 283 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 DENND1BQ6P3S1 775 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 PKN3Q6P5Z2 889 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 OTOAQ7RTW8 1153 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 MCOLN2Q8IZK6 566 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 REPS2Q8NFH8 660 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 ZC3H15Q8WU90 426 aaKnown RBP3.35□□□□□ -1.87
KNL1-202ENST00000399668 KRT35Q92764 455 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 CELF6Q96J87 481 aaKnown RBP3.35□□□□□ -1.87
KNL1-202ENST00000399668 PNMA5Q96PV4 448 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 THUMPD3Q9BV44 507 aaKnown RBP3.35□□□□□ -1.87
KNL1-202ENST00000399668 RERGLQ9H628 205 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 TMBIM4Q9HC24 238 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 SLC40A1Q9NP59 571 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 IARS2Q9NSE4 1012 aaKnown RBP3.35□□□□□ -1.87
KNL1-202ENST00000399668 RBM22Q9NW64 420 aaKnown RBP eCLIP3.35□□□□□ -1.87
KNL1-202ENST00000399668 CCDC167Q9P0B6 97 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 FAM198AQ9UFP1 575 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 NUDT5Q9UKK9 219 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 TCF20Q9UGU0 1960 aaKnown RBP3.35□□□□□ -1.87
KNL1-202ENST00000399668 MAST2Q6P0Q8 1798 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 TBC1D4O60343 1298 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 SPAG6O75602 509 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 ANXA9O76027 345 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 FKBP9O95302 570 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 HIST1H2AGP0C0S8 130 aaPredicted RBP3.35□□□□□ -1.87
KNL1-202ENST00000399668 ETS1P14921 441 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 HIST1H2ADP20671 130 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 SLC26A2P50443 739 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 CCNG1P51959 295 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 FCGRTP55899 365 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 BEX3Q00994 111 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 PTK2BQ14289 1009 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 MAPRE2Q15555 327 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 ARSHQ5FYA8 562 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 TJAP1Q5JTD0 557 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 SEL1L3Q68CR1 1132 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 NAPEPLDQ6IQ20 393 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 WDR59Q6PJI9 974 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 C16orf89Q6UX73 402 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 C1orf186Q6ZWK4 172 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 FKBP9P1Q75LS8 142 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 MTDHQ86UE4 582 aaKnown RBP3.35□□□□□ -1.87
KNL1-202ENST00000399668 INPP5DQ92835 1189 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 STAMBPL1Q96FJ0 436 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 VPS50Q96JG6 964 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 HIST1H2AHQ96KK5 128 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 MAGEB18Q96M61 343 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 PPP1R2P1Q96PQ5 205 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 SMAD5Q99717 465 aaKnown RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms