RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 ATG2BQ96BY7 2078 aa14.73□□□□□ -0.05
HLA-DQB1-202ENST00000399079 RNF40O75150 1001 aa14.72□□□□□ -0.05
HLA-DQB1-202ENST00000399079 NCAM1P13591 858 aa14.72□□□□□ -0.05
HLA-DQB1-202ENST00000399079 DRD1P21728 446 aa14.72□□□□□ -0.05
HLA-DQB1-202ENST00000399079 JAM2P57087 298 aa14.72□□□□□ -0.05
HLA-DQB1-202ENST00000399079 BPIFB4P59827 614 aa14.72□□□□□ -0.05
HLA-DQB1-202ENST00000399079 GAD2Q05329 585 aa14.72□□□□□ -0.05
HLA-DQB1-202ENST00000399079 TAF5Q15542 800 aa14.72□□□□□ -0.05
HLA-DQB1-202ENST00000399079 NOP9Q86U38 636 aaKnown RBP14.72□□□□□ -0.05
HLA-DQB1-202ENST00000399079 LUZP1Q86V48 1076 aa14.72□□□□□ -0.05
HLA-DQB1-202ENST00000399079 SPEM1Q8N4L4 309 aa14.72□□□□□ -0.05
HLA-DQB1-202ENST00000399079 DDX1Q92499 740 aaKnown RBP14.72□□□□□ -0.05
HLA-DQB1-202ENST00000399079 GOLGA1Q92805 767 aa14.72□□□□□ -0.05
HLA-DQB1-202ENST00000399079 ERGIC2Q96RQ1 377 aa14.72□□□□□ -0.05
HLA-DQB1-202ENST00000399079 IRF2BPLQ9H1B7 796 aa14.72□□□□□ -0.05
HLA-DQB1-202ENST00000399079 CBX8Q9HC52 389 aa14.72□□□□□ -0.05
HLA-DQB1-202ENST00000399079 PLK2Q9NYY3 685 aa14.72□□□□□ -0.05
HLA-DQB1-202ENST00000399079 AGO1Q9UL18 857 aaKnown RBP14.72□□□□□ -0.05
HLA-DQB1-202ENST00000399079 NAALADL1Q9UQQ1 740 aa14.72□□□□□ -0.05
HLA-DQB1-202ENST00000399079 NEDD8-MDP1E9PL57 170 aa14.71□□□□□ -0.05
HLA-DQB1-202ENST00000399079 TRIM24O15164 1050 aa14.71□□□□□ -0.05
HLA-DQB1-202ENST00000399079 KDSRQ06136 332 aa14.71□□□□□ -0.05
HLA-DQB1-202ENST00000399079 SKOR2Q2VWA4 1001 aaPredicted RBP14.71□□□□□ -0.05
HLA-DQB1-202ENST00000399079 SYPL2Q5VXT5 272 aa14.71□□□□□ -0.05
HLA-DQB1-202ENST00000399079 SMYD5Q6GMV2 418 aa14.71□□□□□ -0.05
HLA-DQB1-202ENST00000399079 MAMSTRQ6ZN01 415 aa14.71□□□□□ -0.05
HLA-DQB1-202ENST00000399079 SYNPOQ8N3V7 929 aa14.71□□□□□ -0.05
HLA-DQB1-202ENST00000399079 NEK11Q8NG66 645 aa14.71□□□□□ -0.05
HLA-DQB1-202ENST00000399079 EPS8L1Q8TE68 723 aa14.71□□□□□ -0.05
HLA-DQB1-202ENST00000399079 SPAG5Q96R06 1193 aa14.71□□□□□ -0.05
HLA-DQB1-202ENST00000399079 BBS2Q9BXC9 721 aa14.71□□□□□ -0.05
HLA-DQB1-202ENST00000399079 PDCL3Q9H2J4 239 aa14.71□□□□□ -0.05
HLA-DQB1-202ENST00000399079 RTN4Q9NQC3 1192 aaKnown RBP14.71□□□□□ -0.05
HLA-DQB1-202ENST00000399079 PRMT8Q9NR22 394 aaPredicted RBP14.71□□□□□ -0.05
HLA-DQB1-202ENST00000399079 FBXO4Q9UKT5 387 aa14.71□□□□□ -0.05
HLA-DQB1-202ENST00000399079 R4GN57 208 aa14.71□□□□□ -0.05
HLA-DQB1-202ENST00000399079 K7EQS6 105 aa14.71□□□□□ -0.06
HLA-DQB1-202ENST00000399079 HOXC11O43248 304 aaPredicted RBP14.71□□□□□ -0.06
HLA-DQB1-202ENST00000399079 SART1O43290 800 aaKnown RBP14.71□□□□□ -0.06
HLA-DQB1-202ENST00000399079 TULP3O75386 442 aa14.71□□□□□ -0.06
HLA-DQB1-202ENST00000399079 ERBB2P04626 1255 aa14.71□□□□□ -0.06
HLA-DQB1-202ENST00000399079 MMEP08473 750 aa14.71□□□□□ -0.06
HLA-DQB1-202ENST00000399079 TYRP14679 529 aa14.71□□□□□ -0.06
HLA-DQB1-202ENST00000399079 SOX5P35711 763 aa14.71□□□□□ -0.06
HLA-DQB1-202ENST00000399079 CXCL12P48061 93 aa14.71□□□□□ -0.06
HLA-DQB1-202ENST00000399079 SEC13P55735 322 aa14.71□□□□□ -0.06
HLA-DQB1-202ENST00000399079 TRIP4Q15650 581 aaPredicted RBP14.71□□□□□ -0.06
HLA-DQB1-202ENST00000399079 PTPN20Q4JDL3 420 aa14.71□□□□□ -0.06
HLA-DQB1-202ENST00000399079 MSANTD2Q6P1R3 559 aa14.71□□□□□ -0.06
HLA-DQB1-202ENST00000399079 ETFBKMTQ8IXQ9 262 aa14.71□□□□□ -0.06
HLA-DQB1-202ENST00000399079 RPLP0P6Q8NHW5 317 aa14.71□□□□□ -0.06
HLA-DQB1-202ENST00000399079 ADAM32Q8TC27 787 aa14.71□□□□□ -0.06
HLA-DQB1-202ENST00000399079 SLC20A1Q8WUM9 679 aa14.71□□□□□ -0.06
HLA-DQB1-202ENST00000399079 EXOC4Q96A65 974 aa14.71□□□□□ -0.06
HLA-DQB1-202ENST00000399079 PLD4Q96BZ4 506 aa14.71□□□□□ -0.06
HLA-DQB1-202ENST00000399079 NAP1L5Q96NT1 182 aaPredicted RBP14.71□□□□□ -0.06
HLA-DQB1-202ENST00000399079 PNKPQ96T60 521 aa14.71□□□□□ -0.06
HLA-DQB1-202ENST00000399079 IER2Q9BTL4 223 aa14.71□□□□□ -0.06
HLA-DQB1-202ENST00000399079 DCLK3Q9C098 648 aa14.71□□□□□ -0.06
HLA-DQB1-202ENST00000399079 HBS1LQ9Y450 684 aaKnown RBP14.71□□□□□ -0.06
HLA-DQB1-202ENST00000399079 FRYLO94915 3013 aa14.7□□□□□ -0.06
HLA-DQB1-202ENST00000399079 GRAP2O75791 330 aa14.7□□□□□ -0.06
HLA-DQB1-202ENST00000399079 EIF2DP41214 584 aaKnown RBP14.7□□□□□ -0.06
HLA-DQB1-202ENST00000399079 HARS2P49590 506 aaKnown RBP14.7□□□□□ -0.06
HLA-DQB1-202ENST00000399079 CCR3P51677 355 aa14.7□□□□□ -0.06
HLA-DQB1-202ENST00000399079 YWHAZP63104 245 aaKnown RBP14.7□□□□□ -0.06
HLA-DQB1-202ENST00000399079 FBXO43Q4G163 708 aa14.7□□□□□ -0.06
HLA-DQB1-202ENST00000399079 C2CD6Q53TS8 623 aa14.7□□□□□ -0.06
HLA-DQB1-202ENST00000399079 C2orf27AQ580R0 203 aa14.7□□□□□ -0.06
HLA-DQB1-202ENST00000399079 FAM183BPQ6ZVS7 135 aa14.7□□□□□ -0.06
HLA-DQB1-202ENST00000399079 PHTF2Q8N3S3 785 aa14.7□□□□□ -0.06
HLA-DQB1-202ENST00000399079 DQX1Q8TE96 717 aaKnown RBP14.7□□□□□ -0.06
HLA-DQB1-202ENST00000399079 NOX5Q96PH1 765 aa14.7□□□□□ -0.06
HLA-DQB1-202ENST00000399079 POPDC2Q9HBU9 364 aa14.7□□□□□ -0.06
HLA-DQB1-202ENST00000399079 ZDHHC4Q9NPG8 344 aa14.7□□□□□ -0.06
HLA-DQB1-202ENST00000399079 ARHGEF4Q9NR80 690 aa14.7□□□□□ -0.06
HLA-DQB1-202ENST00000399079 NOCTQ9UK39 431 aaKnown RBP14.7□□□□□ -0.06
HLA-DQB1-202ENST00000399079 ZNF510Q9Y2H8 683 aa14.7□□□□□ -0.06
HLA-DQB1-202ENST00000399079 CEP83Q9Y592 693 aa14.7□□□□□ -0.06
HLA-DQB1-202ENST00000399079 WDR87Q6ZQQ6 2873 aa14.69□□□□□ -0.06
HLA-DQB1-202ENST00000399079 CAPN9O14815 690 aa14.69□□□□□ -0.06
HLA-DQB1-202ENST00000399079 KAT7O95251 611 aa14.69□□□□□ -0.06
HLA-DQB1-202ENST00000399079 TDGF1P13385 188 aa14.69□□□□□ -0.06
HLA-DQB1-202ENST00000399079 CDH5P33151 784 aaPredicted RBP14.69□□□□□ -0.06
HLA-DQB1-202ENST00000399079 CHKAP35790 457 aa14.69□□□□□ -0.06
HLA-DQB1-202ENST00000399079 NBL1P41271 181 aa14.69□□□□□ -0.06
HLA-DQB1-202ENST00000399079 PITX1P78337 314 aaPredicted RBP14.69□□□□□ -0.06
HLA-DQB1-202ENST00000399079 ARID5AQ03989 594 aa14.69□□□□□ -0.06
HLA-DQB1-202ENST00000399079 ZNF528Q3MIS6 628 aa14.69□□□□□ -0.06
HLA-DQB1-202ENST00000399079 EMC10Q5UCC4 262 aa14.69□□□□□ -0.06
HLA-DQB1-202ENST00000399079 OR6B2Q6IFH4 312 aa14.69□□□□□ -0.06
HLA-DQB1-202ENST00000399079 TMEM35BQ8NCS4 154 aa14.69□□□□□ -0.06
HLA-DQB1-202ENST00000399079 CPA5Q8WXQ8 436 aa14.69□□□□□ -0.06
HLA-DQB1-202ENST00000399079 SYNCQ9H7C4 482 aa14.69□□□□□ -0.06
HLA-DQB1-202ENST00000399079 DNAJC17Q9NVM6 304 aaKnown RBP14.69□□□□□ -0.06
HLA-DQB1-202ENST00000399079 MARK1Q9P0L2 795 aa14.69□□□□□ -0.06
HLA-DQB1-202ENST00000399079 DEC1Q9P2X7 70 aa14.69□□□□□ -0.06
HLA-DQB1-202ENST00000399079 ZFHX2Q9C0A1 2572 aaPredicted RBP14.69□□□□□ -0.06
HLA-DQB1-202ENST00000399079 A0A1B0GTH6 734 aa14.68□□□□□ -0.06
HLA-DQB1-202ENST00000399079 K7ESF4 209 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms