RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.37□□□□□ -0.59
HPS4-202ENST00000398145 ALYREFQ86V81 257 aaKnown RBP11.37□□□□□ -0.59
HPS4-202ENST00000398145 PHF13Q86YI8 300 aaPredicted RBP11.37□□□□□ -0.59
HPS4-202ENST00000398145 OR9Q1Q8NGQ5 310 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 ZNF483Q8TF39 744 aaPredicted RBP11.37□□□□□ -0.59
HPS4-202ENST00000398145 KREMEN1Q96MU8 473 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 APOL2Q9BQE5 337 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 VTI1BQ9UEU0 232 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 USP20Q9Y2K6 914 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 MON2Q7Z3U7 1717 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 hCG_1818297A0A087WSY0 165 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 C19orf81C9J6K1 198 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 ARHGEF9O43307 516 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 RAP1GAPP47736 663 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 ARPP19P56211 112 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 NOMO3P69849 1222 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 PCSK7Q16549 785 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 C12orf50Q8NA57 414 aaPredicted RBP11.37□□□□□ -0.59
HPS4-202ENST00000398145 RFWD2Q8NHY2 731 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 DIS3LQ8TF46 1054 aaKnown RBP11.37□□□□□ -0.59
HPS4-202ENST00000398145 CYP4F12Q9HCS2 524 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 SCN3BQ9NY72 215 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 CHKBQ9Y259 395 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 ATF5Q9Y2D1 282 aaPredicted RBP11.37□□□□□ -0.59
HPS4-202ENST00000398145 A0A087WXM4 84 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 TCRBV9S1A1TA0A576 114 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 WDR27A2RRH5 827 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 RGL2O15211 777 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 HBP1O60381 514 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 CD4P01730 458 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 MPOP05164 745 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 ATICP31939 592 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 GNL1P36915 607 aaPredicted RBP11.37□□□□□ -0.59
HPS4-202ENST00000398145 NR1H2P55055 460 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 HADHBP55084 474 aaKnown RBP11.37□□□□□ -0.59
HPS4-202ENST00000398145 KHDC1Q4VXA5 237 aaKnown RBP11.37□□□□□ -0.59
HPS4-202ENST00000398145 TBCELQ5QJ74 424 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 EFL1Q7Z2Z2 1120 aaKnown RBP11.37□□□□□ -0.59
HPS4-202ENST00000398145 ABI1Q8IZP0 508 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 TMCO5AQ8N6Q1 288 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 RMDN1Q96DB5 314 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 UBE2OQ9C0C9 1292 aaKnown RBP11.37□□□□□ -0.59
HPS4-202ENST00000398145 RIC8BQ9NVN3 520 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 SAC3D1A6NKF1 404 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 PMPCBO75439 489 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 TOMM70O94826 608 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 FASP25445 335 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 PKNOX1P55347 436 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 GRTP1Q5TC63 336 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 SH3TC2Q8TF17 1288 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 SPON2Q9BUD6 331 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 WDR18Q9BV38 432 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 PXMP2Q9NR77 195 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 HACD3Q9P035 362 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 VANGL2Q9ULK5 521 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 STXBP5LQ9Y2K9 1186 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 SIGLEC16A6NMB1 481 aa11.36□□□□□ -0.59
HPS4-202ENST00000398145 C6orf222P0C671 652 aaPredicted RBP11.36□□□□□ -0.59
HPS4-202ENST00000398145 RARBP10826 455 aa11.36□□□□□ -0.59
HPS4-202ENST00000398145 FCGR1AP12314 374 aa11.36□□□□□ -0.59
HPS4-202ENST00000398145 PTPN7P35236 360 aa11.36□□□□□ -0.59
HPS4-202ENST00000398145 TCF7P36402 384 aaPredicted RBP11.36□□□□□ -0.59
HPS4-202ENST00000398145 PRKAA2P54646 552 aa11.36□□□□□ -0.59
HPS4-202ENST00000398145 WASHC5Q12768 1159 aa11.36□□□□□ -0.59
HPS4-202ENST00000398145 LIN52Q52LA3 116 aa11.36□□□□□ -0.59
HPS4-202ENST00000398145 POLNQ7Z5Q5 900 aa11.36□□□□□ -0.59
HPS4-202ENST00000398145 CCDC60Q8IWA6 550 aaPredicted RBP11.36□□□□□ -0.59
HPS4-202ENST00000398145 BRSK2Q8IWQ3 736 aa11.36□□□□□ -0.59
HPS4-202ENST00000398145 C12orf56Q8IXR9 622 aa11.36□□□□□ -0.59
HPS4-202ENST00000398145 TMEM161BQ8NDZ6 487 aa11.36□□□□□ -0.59
HPS4-202ENST00000398145 GSTCDQ8NEC7 633 aa11.36□□□□□ -0.59
HPS4-202ENST00000398145 HTR3CQ8WXA8 447 aa11.36□□□□□ -0.59
HPS4-202ENST00000398145 SNX19Q92543 992 aa11.36□□□□□ -0.59
HPS4-202ENST00000398145 DGCR14Q96DF8 476 aaKnown RBP11.36□□□□□ -0.59
HPS4-202ENST00000398145 PABPC5Q96DU9 382 aaKnown RBP11.36□□□□□ -0.59
HPS4-202ENST00000398145 DPP3Q9NY33 737 aa11.36□□□□□ -0.59
HPS4-202ENST00000398145 PPME1Q9Y570 386 aa11.36□□□□□ -0.59
HPS4-202ENST00000398145 PRR5-ARHGAP8B1AHC4 643 aa11.36□□□□□ -0.59
HPS4-202ENST00000398145 CLOCKO15516 846 aa11.36□□□□□ -0.59
HPS4-202ENST00000398145 KRT75O95678 551 aa11.36□□□□□ -0.59
HPS4-202ENST00000398145 MGAT1P26572 445 aa11.36□□□□□ -0.59
HPS4-202ENST00000398145 DEFA1P59665 94 aa11.36□□□□□ -0.59
HPS4-202ENST00000398145 DEFA3P59666 94 aa11.36□□□□□ -0.59
HPS4-202ENST00000398145 ARHGAP8P85298 464 aa11.36□□□□□ -0.59
HPS4-202ENST00000398145 XIAPP98170 497 aa11.36□□□□□ -0.59
HPS4-202ENST00000398145 SPDYAQ5MJ70 313 aa11.36□□□□□ -0.59
HPS4-202ENST00000398145 PATL1Q86TB9 770 aaKnown RBP11.36□□□□□ -0.59
HPS4-202ENST00000398145 CROCCP3Q8IVE0 287 aa11.36□□□□□ -0.59
HPS4-202ENST00000398145 HNRNPRO43390 633 aaKnown RBP11.36□□□□□ -0.59
HPS4-202ENST00000398145 UPP2O95045 317 aa11.36□□□□□ -0.59
HPS4-202ENST00000398145 LYNP07948 512 aa11.36□□□□□ -0.59
HPS4-202ENST00000398145 PGAM1P18669 254 aa11.36□□□□□ -0.59
HPS4-202ENST00000398145 SLC5A9Q2M3M2 681 aa11.36□□□□□ -0.59
HPS4-202ENST00000398145 ZACNQ401N2 412 aa11.36□□□□□ -0.59
HPS4-202ENST00000398145 KCNT2Q6UVM3 1135 aa11.36□□□□□ -0.59
HPS4-202ENST00000398145 ZPBP2Q6X784 338 aa11.36□□□□□ -0.59
HPS4-202ENST00000398145 TSHZ1Q6ZSZ6 1077 aa11.36□□□□□ -0.59
HPS4-202ENST00000398145 RBM15BQ8NDT2 890 aaKnown RBP11.36□□□□□ -0.59
HPS4-202ENST00000398145 ZBTB45Q96K62 511 aaPredicted RBP11.36□□□□□ -0.59
HPS4-202ENST00000398145 STN1Q9H668 368 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms