RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 SND1Q7KZF4 910 aaKnown RBP eCLIP22.05■■□□□ 1.12
CPNE1-204ENST00000397443 BEND5Q7L4P6 421 aa22.05■■□□□ 1.12
CPNE1-204ENST00000397443 TRMT2BQ96GJ1 504 aaKnown RBP22.05■■□□□ 1.12
CPNE1-204ENST00000397443 NACA2Q9H009 215 aa22.05■■□□□ 1.12
CPNE1-204ENST00000397443 SMOC2Q9H3U7 446 aa22.05■■□□□ 1.12
CPNE1-204ENST00000397443 PLEKHA4Q9H4M7 779 aa22.05■■□□□ 1.12
CPNE1-204ENST00000397443 WDR6Q9NNW5 1121 aaKnown RBP22.05■■□□□ 1.12
CPNE1-204ENST00000397443 RASAL2Q9UJF2 1139 aa22.05■■□□□ 1.12
CPNE1-204ENST00000397443 ENDOD1O94919 500 aa22.04■■□□□ 1.12
CPNE1-204ENST00000397443 CD48P09326 243 aa22.04■■□□□ 1.12
CPNE1-204ENST00000397443 ZDHHC11BP0C7U3 371 aa22.04■■□□□ 1.12
CPNE1-204ENST00000397443 WHAMMP3Q1A5X7 153 aa22.04■■□□□ 1.12
CPNE1-204ENST00000397443 KAZNQ674X7 775 aa22.04■■□□□ 1.12
CPNE1-204ENST00000397443 BNIPLQ7Z465 357 aa22.04■■□□□ 1.12
CPNE1-204ENST00000397443 ANKS1BQ7Z6G8 1248 aa22.04■■□□□ 1.12
CPNE1-204ENST00000397443 LRRN4CLQ8ND94 238 aa22.04■■□□□ 1.12
CPNE1-204ENST00000397443 PDZD8Q8NEN9 1154 aa22.04■■□□□ 1.12
CPNE1-204ENST00000397443 HEMGNQ9BXL5 484 aa22.04■■□□□ 1.12
CPNE1-204ENST00000397443 ZNF576Q9H609 170 aa22.04■■□□□ 1.12
CPNE1-204ENST00000397443 DDX56Q9NY93 547 aaKnown RBP22.04■■□□□ 1.12
CPNE1-204ENST00000397443 UXTQ9UBK9 157 aaPredicted RBP22.04■■□□□ 1.12
CPNE1-204ENST00000397443 ZMYND10O75800 440 aa22.04■■□□□ 1.12
CPNE1-204ENST00000397443 HMBSP08397 361 aa22.04■■□□□ 1.12
CPNE1-204ENST00000397443 MYL4P12829 197 aa22.04■■□□□ 1.12
CPNE1-204ENST00000397443 GABRR2P28476 465 aa22.04■■□□□ 1.12
CPNE1-204ENST00000397443 GBP1P32455 592 aa22.04■■□□□ 1.12
CPNE1-204ENST00000397443 CDH6P55285 790 aa22.04■■□□□ 1.12
CPNE1-204ENST00000397443 PPP6R3Q5H9R7 873 aaPredicted RBP22.04■■□□□ 1.12
CPNE1-204ENST00000397443 ERMARDQ5T6L9 678 aa22.04■■□□□ 1.12
CPNE1-204ENST00000397443 MFSD7Q6UXD7 560 aa22.04■■□□□ 1.12
CPNE1-204ENST00000397443 EXD1Q8NHP7 514 aa22.04■■□□□ 1.12
CPNE1-204ENST00000397443 NCAPGQ9BPX3 1015 aa22.04■■□□□ 1.12
CPNE1-204ENST00000397443 CALN1Q9BXU9 219 aa22.04■■□□□ 1.12
CPNE1-204ENST00000397443 DHX35Q9H5Z1 703 aaKnown RBP22.04■■□□□ 1.12
CPNE1-204ENST00000397443 WDCPQ9H6R7 721 aa22.04■■□□□ 1.12
CPNE1-204ENST00000397443 TRPC7Q9HCX4 862 aa22.04■■□□□ 1.12
CPNE1-204ENST00000397443 AP4E1Q9UPM8 1137 aa22.04■■□□□ 1.12
CPNE1-204ENST00000397443 COLQQ9Y215 455 aaPredicted RBP22.04■■□□□ 1.12
CPNE1-204ENST00000397443 ASB3Q9Y575 518 aa22.04■■□□□ 1.12
CPNE1-204ENST00000397443 C2orf78A6NCI8 922 aa22.03■■□□□ 1.12
CPNE1-204ENST00000397443 IRAK2O43187 625 aa22.03■■□□□ 1.12
CPNE1-204ENST00000397443 GJA1P17302 382 aa22.03■■□□□ 1.12
CPNE1-204ENST00000397443 PAFAH1B1P43034 410 aa22.03■■□□□ 1.12
CPNE1-204ENST00000397443 TUBB2AQ13885 445 aa22.03■■□□□ 1.12
CPNE1-204ENST00000397443 KRT81Q14533 505 aa22.03■■□□□ 1.12
CPNE1-204ENST00000397443 LONRF2Q1L5Z9 754 aa22.03■■□□□ 1.12
CPNE1-204ENST00000397443 BOLA3Q53S33 107 aa22.03■■□□□ 1.12
CPNE1-204ENST00000397443 TMEM150AQ86TG1 271 aa22.03■■□□□ 1.12
CPNE1-204ENST00000397443 PYROXD2Q8N2H3 581 aa22.03■■□□□ 1.12
CPNE1-204ENST00000397443 MRPL38Q96DV4 380 aaKnown RBP22.03■■□□□ 1.12
CPNE1-204ENST00000397443 PGAP3Q96FM1 320 aaPredicted RBP22.03■■□□□ 1.12
CPNE1-204ENST00000397443 TUBB2BQ9BVA1 445 aa22.03■■□□□ 1.12
CPNE1-204ENST00000397443 ANLNQ9NQW6 1124 aa22.03■■□□□ 1.12
CPNE1-204ENST00000397443 MARCH2Q9P0N8 246 aa22.03■■□□□ 1.12
CPNE1-204ENST00000397443 PGRMC1O00264 195 aaKnown RBP22.02■■□□□ 1.12
CPNE1-204ENST00000397443 F9P00740 461 aa22.02■■□□□ 1.12
CPNE1-204ENST00000397443 KRT10P13645 584 aa22.02■■□□□ 1.12
CPNE1-204ENST00000397443 KDELR1P24390 212 aa22.02■■□□□ 1.12
CPNE1-204ENST00000397443 CYP4F8P98187 520 aa22.02■■□□□ 1.12
CPNE1-204ENST00000397443 HECTD3Q5T447 861 aa22.02■■□□□ 1.12
CPNE1-204ENST00000397443 RCOR2Q8IZ40 523 aa22.02■■□□□ 1.12
CPNE1-204ENST00000397443 C12orf76Q8N812 135 aaPredicted RBP22.02■■□□□ 1.12
CPNE1-204ENST00000397443 UBE2Q2Q8WVN8 375 aa22.02■■□□□ 1.12
CPNE1-204ENST00000397443 OVCA2Q8WZ82 227 aa22.02■■□□□ 1.12
CPNE1-204ENST00000397443 RBM41Q96IZ5 413 aaKnown RBP22.02■■□□□ 1.12
CPNE1-204ENST00000397443 SERPINB11Q96P15 392 aa22.02■■□□□ 1.12
CPNE1-204ENST00000397443 AP1M1Q9BXS5 423 aa22.02■■□□□ 1.12
CPNE1-204ENST00000397443 TKTL2Q9H0I9 626 aa22.02■■□□□ 1.12
CPNE1-204ENST00000397443 REV3LO60673 3130 aa22.02■■□□□ 1.12
CPNE1-204ENST00000397443 CES2O00748 559 aa22.02■■□□□ 1.11
CPNE1-204ENST00000397443 MOCS2O96007 188 aaPredicted RBP22.02■■□□□ 1.11
CPNE1-204ENST00000397443 IGLV3-25P01717 112 aa22.02■■□□□ 1.11
CPNE1-204ENST00000397443 F11P03951 625 aa22.02■■□□□ 1.11
CPNE1-204ENST00000397443 GGCXP38435 758 aa22.02■■□□□ 1.11
CPNE1-204ENST00000397443 DUSP6Q16828 381 aa22.02■■□□□ 1.11
CPNE1-204ENST00000397443 GAREM2Q75VX8 874 aa22.02■■□□□ 1.11
CPNE1-204ENST00000397443 MNS1Q8NEH6 495 aa22.02■■□□□ 1.11
CPNE1-204ENST00000397443 HERPUD2Q9BSE4 406 aa22.02■■□□□ 1.11
CPNE1-204ENST00000397443 IL21Q9HBE4 155 aa22.02■■□□□ 1.11
CPNE1-204ENST00000397443 ASAH2Q9NR71 780 aa22.02■■□□□ 1.11
CPNE1-204ENST00000397443 OLA1Q9NTK5 396 aaKnown RBP22.02■■□□□ 1.11
CPNE1-204ENST00000397443 FZD10Q9ULW2 581 aa22.02■■□□□ 1.11
CPNE1-204ENST00000397443 PRRC2BQ5JSZ5 2229 aaKnown RBP22.01■■□□□ 1.11
CPNE1-204ENST00000397443 TCRBV7S2A1N4TA0A589 114 aa22.01■■□□□ 1.11
CPNE1-204ENST00000397443 SLC12A8A0AV02 714 aa22.01■■□□□ 1.11
CPNE1-204ENST00000397443 I6L893 689 aaPredicted RBP22.01■■□□□ 1.11
CPNE1-204ENST00000397443 NRG2O14511 850 aaPredicted RBP22.01■■□□□ 1.11
CPNE1-204ENST00000397443 COCHO43405 550 aa22.01■■□□□ 1.11
CPNE1-204ENST00000397443 CXCR3P49682 368 aa22.01■■□□□ 1.11
CPNE1-204ENST00000397443 MMRN1Q13201 1228 aa22.01■■□□□ 1.11
CPNE1-204ENST00000397443 MSANTD2Q6P1R3 559 aa22.01■■□□□ 1.11
CPNE1-204ENST00000397443 SPOCD1Q6ZMY3 1216 aa22.01■■□□□ 1.11
CPNE1-204ENST00000397443 TMC8Q8IU68 726 aa22.01■■□□□ 1.11
CPNE1-204ENST00000397443 RASGEF1CQ8N431 466 aa22.01■■□□□ 1.11
CPNE1-204ENST00000397443 ACTRT1Q8TDG2 376 aa22.01■■□□□ 1.11
CPNE1-204ENST00000397443 ATXN3LQ9H3M9 355 aa22.01■■□□□ 1.11
CPNE1-204ENST00000397443 PRDM12Q9H4Q4 367 aa22.01■■□□□ 1.11
CPNE1-204ENST00000397443 CCDC195A0A1B0GUA6 201 aa22■■□□□ 1.11
CPNE1-204ENST00000397443 A0A1W2PRU2 124 aa22■■□□□ 1.11
CPNE1-204ENST00000397443 ATP5C1P36542 298 aaKnown RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms