RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 EFCAB12Q6NXP0 572 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 POMZP3Q6PJE2 187 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 APOBEC3FQ8IUX4 373 aaKnown RBP12.66□□□□□ -0.38
SMU1-201ENST00000397149 EFCAB1Q9HAE3 211 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 UBE2QL1A1L167 161 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 WWP2O00308 870 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 ADRA2BP18089 450 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 ACO1P21399 889 aaKnown RBP12.66□□□□□ -0.38
SMU1-201ENST00000397149 GALK1P51570 392 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 SEZ6Q53EL9 994 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 ZNF621Q6ZSS3 439 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 CUL7Q14999 1698 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 EIF3DO15371 548 aaKnown RBP eCLIP12.66□□□□□ -0.38
SMU1-201ENST00000397149 EIF4G3O43432 1585 aaKnown RBP12.66□□□□□ -0.38
SMU1-201ENST00000397149 PPP1R37O75864 691 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 AMD1P17707 334 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 SNAP47Q5SQN1 464 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 ATG14Q6ZNE5 492 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 RBM43Q6ZSC3 357 aaKnown RBP12.66□□□□□ -0.38
SMU1-201ENST00000397149 KLHL23Q8NBE8 558 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 MASTLQ96GX5 879 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 CNPPD1Q9BV87 410 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 NT5MQ9NPB1 228 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 DENND4BO75064 1496 aaPredicted RBP12.65□□□□□ -0.38
SMU1-201ENST00000397149 SCN2BO60939 215 aa12.65□□□□□ -0.38
SMU1-201ENST00000397149 LARGE1O95461 756 aa12.65□□□□□ -0.38
SMU1-201ENST00000397149 POLD2P49005 469 aa12.65□□□□□ -0.38
SMU1-201ENST00000397149 HK2P52789 917 aa12.65□□□□□ -0.38
SMU1-201ENST00000397149 AP3M2P53677 418 aa12.65□□□□□ -0.38
SMU1-201ENST00000397149 TAB1Q15750 504 aa12.65□□□□□ -0.38
SMU1-201ENST00000397149 SUGP1Q8IWZ8 645 aaKnown RBP12.65□□□□□ -0.38
SMU1-201ENST00000397149 LRRC4BQ9NT99 713 aa12.65□□□□□ -0.38
SMU1-201ENST00000397149 MAT2BQ9NZL9 334 aa12.65□□□□□ -0.38
SMU1-201ENST00000397149 TBC1D24Q9ULP9 559 aa12.65□□□□□ -0.38
SMU1-201ENST00000397149 PHGDHO43175 533 aaKnown RBP12.65□□□□□ -0.38
SMU1-201ENST00000397149 CLPTM1O96005 669 aa12.65□□□□□ -0.38
SMU1-201ENST00000397149 ZMYND11Q15326 602 aa12.65□□□□□ -0.38
SMU1-201ENST00000397149 FAM20AQ96MK3 541 aa12.65□□□□□ -0.38
SMU1-201ENST00000397149 KCNS3Q9BQ31 491 aa12.65□□□□□ -0.38
SMU1-201ENST00000397149 ATXN2Q99700 1313 aaKnown RBP12.65□□□□□ -0.38
SMU1-201ENST00000397149 TRIM66O15016 1216 aa12.65□□□□□ -0.38
SMU1-201ENST00000397149 ANXA9O76027 345 aa12.65□□□□□ -0.38
SMU1-201ENST00000397149 XRCC4Q13426 336 aa12.65□□□□□ -0.38
SMU1-201ENST00000397149 ZNF605Q86T29 641 aa12.65□□□□□ -0.38
SMU1-201ENST00000397149 ANKFN1Q8N957 763 aa12.65□□□□□ -0.38
SMU1-201ENST00000397149 EMILIN2Q9BXX0 1053 aa12.65□□□□□ -0.38
SMU1-201ENST00000397149 HMG20AQ9NP66 347 aa12.65□□□□□ -0.38
SMU1-201ENST00000397149 ANGPT4Q9Y264 503 aa12.65□□□□□ -0.38
SMU1-201ENST00000397149 ITGALP20701 1170 aa12.65□□□□□ -0.38
SMU1-201ENST00000397149 BST2Q10589 180 aaKnown RBP12.65□□□□□ -0.38
SMU1-201ENST00000397149 TCHHL1Q5QJ38 904 aaPredicted RBP12.65□□□□□ -0.38
SMU1-201ENST00000397149 FICDQ9BVA6 458 aa12.65□□□□□ -0.38
SMU1-201ENST00000397149 VPS9D1Q9Y2B5 631 aa12.65□□□□□ -0.38
SMU1-201ENST00000397149 F5H6K3 240 aa12.65□□□□□ -0.38
SMU1-201ENST00000397149 RBP3P10745 1247 aa12.65□□□□□ -0.38
SMU1-201ENST00000397149 CYP2C9P11712 490 aa12.65□□□□□ -0.38
SMU1-201ENST00000397149 FGFR3P22607 806 aa12.65□□□□□ -0.38
SMU1-201ENST00000397149 KLRC3Q07444 240 aa12.65□□□□□ -0.38
SMU1-201ENST00000397149 GNA13Q14344 377 aa12.65□□□□□ -0.38
SMU1-201ENST00000397149 POM121L1PQ3SYA9 428 aa12.65□□□□□ -0.38
SMU1-201ENST00000397149 LINC00523Q86TU6 105 aa12.65□□□□□ -0.38
SMU1-201ENST00000397149 SLC38A7Q9NVC3 462 aa12.65□□□□□ -0.38
SMU1-201ENST00000397149 ATP9AO75110 1047 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 ITIH2P19823 946 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 RGS1Q08116 209 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 DLG1Q12959 904 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 MTF1Q14872 753 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 KBTBD12Q3ZCT8 623 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 PFASO15067 1338 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 MAGI1Q96QZ7 1491 aaPredicted RBP12.64□□□□□ -0.39
SMU1-201ENST00000397149 A0A0X1KG70 313 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 USP27XA6NNY8 438 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 ITGB3P05106 788 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 SERPINB8P50452 374 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 RAD23AP54725 363 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 ACAP2Q15057 778 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 SWI5Q1ZZU3 235 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 QRICH1Q2TAL8 776 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 ABRAXAS1Q6UWZ7 409 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 TDRD5Q8NAT2 981 aaKnown RBP12.64□□□□□ -0.39
SMU1-201ENST00000397149 MGAT4AQ9UM21 535 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 PRXQ9BXM0 1461 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 SNAP23O00161 211 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 SEC22BO75396 215 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 RHOCP08134 193 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 SEC24CP53992 1094 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 PPP2R2BQ00005 443 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 MADCAM1Q13477 382 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 GRAPQ13588 217 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 ATF7IP2Q5U623 682 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 CNPY4Q8N129 248 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 GRAPLQ8TC17 118 aaPredicted RBP12.64□□□□□ -0.39
SMU1-201ENST00000397149 SSH3Q8TE77 659 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 PROX1Q92786 737 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 ZFYVE28Q9HCC9 887 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 GRXCR2A6NFK2 248 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 AP1G2O75843 785 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 THRAP10827 490 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 UBA1P22314 1058 aaKnown RBP12.64□□□□□ -0.39
SMU1-201ENST00000397149 ATP2C1P98194 919 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms