RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 SPTBN2O15020 2390 aa17.18■□□□□ 0.34
DDR1-229ENST00000396342 SLC12A8A0AV02 714 aa17.17■□□□□ 0.34
DDR1-229ENST00000396342 HHLA1C9JL84 531 aa17.17■□□□□ 0.34
DDR1-229ENST00000396342 PSMA7O14818 248 aa17.17■□□□□ 0.34
DDR1-229ENST00000396342 OPHN1O60890 802 aa17.17■□□□□ 0.34
DDR1-229ENST00000396342 STC2O76061 302 aa17.17■□□□□ 0.34
DDR1-229ENST00000396342 ZBED1O96006 694 aa17.17■□□□□ 0.34
DDR1-229ENST00000396342 SERPINF2P08697 491 aa17.17■□□□□ 0.34
DDR1-229ENST00000396342 ENGP17813 658 aa17.17■□□□□ 0.34
DDR1-229ENST00000396342 GABRG2P18507 467 aa17.17■□□□□ 0.34
DDR1-229ENST00000396342 PTGER3P43115 390 aa17.17■□□□□ 0.34
DDR1-229ENST00000396342 TKTL1P51854 596 aa17.17■□□□□ 0.34
DDR1-229ENST00000396342 ZNF33AQ06730 810 aa17.17■□□□□ 0.34
DDR1-229ENST00000396342 MESP2Q0VG99 397 aa17.17■□□□□ 0.34
DDR1-229ENST00000396342 HNRNPDQ14103 355 aaKnown RBP17.17■□□□□ 0.34
DDR1-229ENST00000396342 C1orf220Q5T0J3 134 aa17.17■□□□□ 0.34
DDR1-229ENST00000396342 SLC23A3Q6PIS1 610 aa17.17■□□□□ 0.34
DDR1-229ENST00000396342 ANKS1BQ7Z6G8 1248 aa17.17■□□□□ 0.34
DDR1-229ENST00000396342 PHTF2Q8N3S3 785 aa17.17■□□□□ 0.34
DDR1-229ENST00000396342 PLD4Q96BZ4 506 aa17.17■□□□□ 0.34
DDR1-229ENST00000396342 NMUR1Q9HB89 426 aa17.17■□□□□ 0.34
DDR1-229ENST00000396342 METTL14Q9HCE5 456 aaKnown RBP17.17■□□□□ 0.34
DDR1-229ENST00000396342 PLK2Q9NYY3 685 aa17.17■□□□□ 0.34
DDR1-229ENST00000396342 DMXL1Q9Y485 3027 aa17.17■□□□□ 0.34
DDR1-229ENST00000396342 FRYLO94915 3013 aa17.16■□□□□ 0.34
DDR1-229ENST00000396342 SDK1Q7Z5N4 2213 aa17.16■□□□□ 0.34
DDR1-229ENST00000396342 MEI4A8MW99 385 aa17.16■□□□□ 0.34
DDR1-229ENST00000396342 PATE3B3GLJ2 98 aa17.16■□□□□ 0.34
DDR1-229ENST00000396342 MDM4O15151 490 aa17.16■□□□□ 0.34
DDR1-229ENST00000396342 ITPKAP23677 461 aa17.16■□□□□ 0.34
DDR1-229ENST00000396342 OXTRP30559 389 aa17.16■□□□□ 0.34
DDR1-229ENST00000396342 LRRC63Q05C16 580 aa17.16■□□□□ 0.34
DDR1-229ENST00000396342 BST2Q10589 180 aaKnown RBP17.16■□□□□ 0.34
DDR1-229ENST00000396342 FOXC1Q12948 553 aa17.16■□□□□ 0.34
DDR1-229ENST00000396342 EIF4HQ15056 248 aaKnown RBP17.16■□□□□ 0.34
DDR1-229ENST00000396342 ZNF658Q5TYW1 1059 aaPredicted RBP17.16■□□□□ 0.34
DDR1-229ENST00000396342 ARHGAP17Q68EM7 881 aa17.16■□□□□ 0.34
DDR1-229ENST00000396342 PIGZQ86VD9 579 aa17.16■□□□□ 0.34
DDR1-229ENST00000396342 DENND1CQ8IV53 801 aa17.16■□□□□ 0.34
DDR1-229ENST00000396342 ZNF557Q8N988 423 aaPredicted RBP17.16■□□□□ 0.34
DDR1-229ENST00000396342 SLC2A11Q9BYW1 496 aa17.16■□□□□ 0.34
DDR1-229ENST00000396342 CIPCQ9C0C6 399 aa17.16■□□□□ 0.34
DDR1-229ENST00000396342 PRDM16Q9HAZ2 1276 aa17.16■□□□□ 0.34
DDR1-229ENST00000396342 OSER1Q9NX31 292 aa17.16■□□□□ 0.34
DDR1-229ENST00000396342 CACNA2D2Q9NY47 1150 aa17.16■□□□□ 0.34
DDR1-229ENST00000396342 PILRBQ9UKJ0 227 aa17.16■□□□□ 0.34
DDR1-229ENST00000396342 PLA2G4CQ9UP65 541 aa17.16■□□□□ 0.34
DDR1-229ENST00000396342 USP3Q9Y6I4 520 aa17.16■□□□□ 0.34
DDR1-229ENST00000396342 DENND4CQ5VZ89 1909 aa17.15■□□□□ 0.34
DDR1-229ENST00000396342 TYW5A2RUC4 315 aaKnown RBP17.15■□□□□ 0.34
DDR1-229ENST00000396342 HNRNPLP14866 589 aaKnown RBP eCLIP17.15■□□□□ 0.34
DDR1-229ENST00000396342 CUL2Q13617 745 aa17.15■□□□□ 0.34
DDR1-229ENST00000396342 GOLGA7BQ2TAP0 167 aa17.15■□□□□ 0.34
DDR1-229ENST00000396342 CCDC40Q4G0X9 1142 aa17.15■□□□□ 0.34
DDR1-229ENST00000396342 MPPE1Q53F39 396 aa17.15■□□□□ 0.34
DDR1-229ENST00000396342 DEFB119Q8N690 84 aa17.15■□□□□ 0.34
DDR1-229ENST00000396342 TRIML1Q8N9V2 468 aa17.15■□□□□ 0.34
DDR1-229ENST00000396342 PRCCQ92733 491 aaPredicted RBP17.15■□□□□ 0.34
DDR1-229ENST00000396342 WBP2Q969T9 261 aa17.15■□□□□ 0.34
DDR1-229ENST00000396342 EEF2KMTQ96G04 330 aa17.15■□□□□ 0.34
DDR1-229ENST00000396342 HSPA12BQ96MM6 686 aa17.15■□□□□ 0.34
DDR1-229ENST00000396342 GABRG3Q99928 467 aa17.15■□□□□ 0.34
DDR1-229ENST00000396342 MBD1Q9UIS9 605 aaPredicted RBP17.15■□□□□ 0.34
DDR1-229ENST00000396342 SLC27A6Q9Y2P4 619 aa17.15■□□□□ 0.34
DDR1-229ENST00000396342 PCDHB9Q9Y5E1 797 aa17.15■□□□□ 0.34
DDR1-229ENST00000396342 STON1Q9Y6Q2 735 aa17.15■□□□□ 0.34
DDR1-229ENST00000396342 OBSL1O75147 1896 aa17.15■□□□□ 0.34
DDR1-229ENST00000396342 ATXN2Q99700 1313 aaKnown RBP17.15■□□□□ 0.34
DDR1-229ENST00000396342 XPO1O14980 1071 aaKnown RBP17.14■□□□□ 0.33
DDR1-229ENST00000396342 TRIM24O15164 1050 aa17.14■□□□□ 0.33
DDR1-229ENST00000396342 SETSIPP0DME0 302 aa17.14■□□□□ 0.33
DDR1-229ENST00000396342 NDUFV2P19404 249 aa17.14■□□□□ 0.33
DDR1-229ENST00000396342 CD6P30203 668 aa17.14■□□□□ 0.33
DDR1-229ENST00000396342 PGFP49763 221 aa17.14■□□□□ 0.33
DDR1-229ENST00000396342 RAD23BP54727 409 aa17.14■□□□□ 0.33
DDR1-229ENST00000396342 NUCB2P80303 420 aa17.14■□□□□ 0.33
DDR1-229ENST00000396342 PNOCQ13519 176 aa17.14■□□□□ 0.33
DDR1-229ENST00000396342 PLEKHG6Q3KR16 790 aa17.14■□□□□ 0.33
DDR1-229ENST00000396342 ZCWPW2Q504Y3 356 aa17.14■□□□□ 0.33
DDR1-229ENST00000396342 SERPINA13PQ6UXR4 307 aa17.14■□□□□ 0.33
DDR1-229ENST00000396342 Q6ZNB5 142 aa17.14■□□□□ 0.33
DDR1-229ENST00000396342 SCD5Q86SK9 330 aa17.14■□□□□ 0.33
DDR1-229ENST00000396342 SMYD4Q8IYR2 804 aaPredicted RBP17.14■□□□□ 0.33
DDR1-229ENST00000396342 SLC4A11Q8NBS3 891 aa17.14■□□□□ 0.33
DDR1-229ENST00000396342 DDX50Q9BQ39 737 aaKnown RBP17.14■□□□□ 0.33
DDR1-229ENST00000396342 GOLPH3LQ9H4A5 285 aa17.14■□□□□ 0.33
DDR1-229ENST00000396342 HBS1LQ9Y450 684 aaKnown RBP17.14■□□□□ 0.33
DDR1-229ENST00000396342 DCHS1Q96JQ0 3298 aa17.14■□□□□ 0.33
DDR1-229ENST00000396342 RALGAPA1Q6GYQ0 2036 aa17.13■□□□□ 0.33
DDR1-229ENST00000396342 TPRP12270 2363 aaKnown RBP17.13■□□□□ 0.33
DDR1-229ENST00000396342 IGHV1OR15-9A0A0B4J2B8 117 aa17.13■□□□□ 0.33
DDR1-229ENST00000396342 A0A1W2PQF6 199 aa17.13■□□□□ 0.33
DDR1-229ENST00000396342 PRRT4C9JH25 899 aa17.13■□□□□ 0.33
DDR1-229ENST00000396342 H0Y626 953 aa17.13■□□□□ 0.33
DDR1-229ENST00000396342 ARHGAP33O14559 1287 aa17.13■□□□□ 0.33
DDR1-229ENST00000396342 TRIM16O95361 564 aa17.13■□□□□ 0.33
DDR1-229ENST00000396342 PENKP01210 267 aaPredicted RBP17.13■□□□□ 0.33
DDR1-229ENST00000396342 VDRP11473 427 aa17.13■□□□□ 0.33
DDR1-229ENST00000396342 PRCPP42785 496 aa17.13■□□□□ 0.33
DDR1-229ENST00000396342 STILQ15468 1287 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms