RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 SNX16P57768 344 aa17.28■□□□□ 0.36
CXCL1-201ENST00000395761 TBX2Q13207 712 aaPredicted RBP17.28■□□□□ 0.36
CXCL1-201ENST00000395761 TRIM14Q14142 442 aa17.28■□□□□ 0.36
CXCL1-201ENST00000395761 DHCR24Q15392 516 aa17.28■□□□□ 0.36
CXCL1-201ENST00000395761 EFHC1Q5JVL4 640 aa17.28■□□□□ 0.36
CXCL1-201ENST00000395761 NAIF1Q69YI7 327 aaPredicted RBP17.28■□□□□ 0.36
CXCL1-201ENST00000395761 ASTLQ6HA08 431 aaPredicted RBP17.28■□□□□ 0.36
CXCL1-201ENST00000395761 ZNF852Q6ZMS4 543 aa17.28■□□□□ 0.36
CXCL1-201ENST00000395761 TRIM72Q6ZMU5 477 aa17.28■□□□□ 0.36
CXCL1-201ENST00000395761 PHLDB2Q86SQ0 1253 aa17.28■□□□□ 0.36
CXCL1-201ENST00000395761 RALGPS2Q86X27 583 aaPredicted RBP17.28■□□□□ 0.36
CXCL1-201ENST00000395761 DEFB106AQ8N104 65 aa17.28■□□□□ 0.36
CXCL1-201ENST00000395761 CPA6Q8N4T0 437 aa17.28■□□□□ 0.36
CXCL1-201ENST00000395761 ADAM32Q8TC27 787 aa17.28■□□□□ 0.36
CXCL1-201ENST00000395761 DQX1Q8TE96 717 aaKnown RBP17.28■□□□□ 0.36
CXCL1-201ENST00000395761 FAM3CQ92520 227 aa17.28■□□□□ 0.36
CXCL1-201ENST00000395761 ANP32BQ92688 251 aaKnown RBP17.28■□□□□ 0.36
CXCL1-201ENST00000395761 POPDC2Q9HBU9 364 aa17.28■□□□□ 0.36
CXCL1-201ENST00000395761 LTB4R2Q9NPC1 389 aa17.28■□□□□ 0.36
CXCL1-201ENST00000395761 LSM7Q9UK45 103 aaKnown RBP17.28■□□□□ 0.36
CXCL1-201ENST00000395761 FAM170BA6NMN3 283 aa17.27■□□□□ 0.36
CXCL1-201ENST00000395761 MAN2B1O00754 1011 aa17.27■□□□□ 0.36
CXCL1-201ENST00000395761 CAPN9O14815 690 aa17.27■□□□□ 0.36
CXCL1-201ENST00000395761 NFATC1O95644 943 aa17.27■□□□□ 0.36
CXCL1-201ENST00000395761 GLI1P08151 1106 aa17.27■□□□□ 0.36
CXCL1-201ENST00000395761 TNFAIP3P21580 790 aa17.27■□□□□ 0.36
CXCL1-201ENST00000395761 MMP8P22894 467 aa17.27■□□□□ 0.36
CXCL1-201ENST00000395761 CASP14P31944 242 aa17.27■□□□□ 0.36
CXCL1-201ENST00000395761 PRKCIP41743 596 aa17.27■□□□□ 0.36
CXCL1-201ENST00000395761 CLCN5P51795 746 aa17.27■□□□□ 0.36
CXCL1-201ENST00000395761 PITX1P78337 314 aaPredicted RBP17.27■□□□□ 0.36
CXCL1-201ENST00000395761 ZBED6P86452 979 aa17.27■□□□□ 0.36
CXCL1-201ENST00000395761 UBXN2BQ14CS0 331 aa17.27■□□□□ 0.36
CXCL1-201ENST00000395761 TRIP4Q15650 581 aaPredicted RBP17.27■□□□□ 0.36
CXCL1-201ENST00000395761 GAB4Q2WGN9 574 aa17.27■□□□□ 0.36
CXCL1-201ENST00000395761 BEND5Q7L4P6 421 aa17.27■□□□□ 0.36
CXCL1-201ENST00000395761 ZNF571Q7Z3V5 609 aaPredicted RBP17.27■□□□□ 0.36
CXCL1-201ENST00000395761 DENND1CQ8IV53 801 aa17.27■□□□□ 0.36
CXCL1-201ENST00000395761 SUGP1Q8IWZ8 645 aaKnown RBP17.27■□□□□ 0.36
CXCL1-201ENST00000395761 ZNF687Q8N1G0 1237 aa17.27■□□□□ 0.36
CXCL1-201ENST00000395761 TMEM105Q8N8V8 129 aa17.27■□□□□ 0.36
CXCL1-201ENST00000395761 SLC2A13Q96QE2 648 aa17.27■□□□□ 0.36
CXCL1-201ENST00000395761 C11orf70Q9BRQ4 267 aa17.27■□□□□ 0.36
CXCL1-201ENST00000395761 ASNSD1Q9NWL6 643 aa17.27■□□□□ 0.36
CXCL1-201ENST00000395761 AGO1Q9UL18 857 aaKnown RBP17.27■□□□□ 0.36
CXCL1-201ENST00000395761 NDRG2Q9UN36 371 aaKnown RBP17.27■□□□□ 0.36
CXCL1-201ENST00000395761 LUC7L2Q9Y383 392 aaKnown RBP17.27■□□□□ 0.36
CXCL1-201ENST00000395761 HBS1LQ9Y450 684 aaKnown RBP17.27■□□□□ 0.36
CXCL1-201ENST00000395761 GOLGA8SH3BPF8 625 aa17.26■□□□□ 0.35
CXCL1-201ENST00000395761 HSF2BPO75031 334 aa17.26■□□□□ 0.35
CXCL1-201ENST00000395761 AOC1P19801 751 aa17.26■□□□□ 0.35
CXCL1-201ENST00000395761 TARSP26639 723 aaKnown RBP17.26■□□□□ 0.35
CXCL1-201ENST00000395761 AVPR2P30518 371 aa17.26■□□□□ 0.35
CXCL1-201ENST00000395761 CORO1AP31146 461 aaKnown RBP17.26■□□□□ 0.35
CXCL1-201ENST00000395761 RNASE9P60153 205 aaKnown RBP17.26■□□□□ 0.35
CXCL1-201ENST00000395761 CENPCQ03188 943 aa17.26■□□□□ 0.35
CXCL1-201ENST00000395761 KLHL30Q0D2K2 578 aa17.26■□□□□ 0.35
CXCL1-201ENST00000395761 PTP4A2Q12974 167 aa17.26■□□□□ 0.35
CXCL1-201ENST00000395761 NR1H3Q13133 447 aa17.26■□□□□ 0.35
CXCL1-201ENST00000395761 FZD5Q13467 585 aa17.26■□□□□ 0.35
CXCL1-201ENST00000395761 PON2Q15165 354 aa17.26■□□□□ 0.35
CXCL1-201ENST00000395761 DCAF6Q58WW2 860 aa17.26■□□□□ 0.35
CXCL1-201ENST00000395761 LY6G5CQ5SRR4 150 aa17.26■□□□□ 0.35
CXCL1-201ENST00000395761 HGSNATQ68CP4 663 aa17.26■□□□□ 0.35
CXCL1-201ENST00000395761 TOGARAM2Q6ZUX3 1019 aa17.26■□□□□ 0.35
CXCL1-201ENST00000395761 SLC26A9Q7LBE3 791 aa17.26■□□□□ 0.35
CXCL1-201ENST00000395761 TMC6Q7Z403 805 aa17.26■□□□□ 0.35
CXCL1-201ENST00000395761 TAC4Q86UU9 113 aa17.26■□□□□ 0.35
CXCL1-201ENST00000395761 TMEM25Q86YD3 366 aa17.26■□□□□ 0.35
CXCL1-201ENST00000395761 ZDHHC17Q8IUH5 632 aa17.26■□□□□ 0.35
CXCL1-201ENST00000395761 ZNF397Q8NF99 534 aaPredicted RBP17.26■□□□□ 0.35
CXCL1-201ENST00000395761 PJA1Q8NG27 643 aa17.26■□□□□ 0.35
CXCL1-201ENST00000395761 PLD4Q96BZ4 506 aa17.26■□□□□ 0.35
CXCL1-201ENST00000395761 OTUB2Q96DC9 234 aa17.26■□□□□ 0.35
CXCL1-201ENST00000395761 TRIM62Q9BVG3 475 aa17.26■□□□□ 0.35
CXCL1-201ENST00000395761 FBRSL1Q9HCM7 1045 aaKnown RBP17.26■□□□□ 0.35
CXCL1-201ENST00000395761 TAS2R14Q9NYV8 317 aa17.26■□□□□ 0.35
CXCL1-201ENST00000395761 IMPACTQ9P2X3 320 aa17.26■□□□□ 0.35
CXCL1-201ENST00000395761 SIT1Q9Y3P8 196 aa17.26■□□□□ 0.35
CXCL1-201ENST00000395761 TRUB2O95900 331 aaKnown RBP17.25■□□□□ 0.35
CXCL1-201ENST00000395761 DCNP07585 359 aaKnown RBP17.25■□□□□ 0.35
CXCL1-201ENST00000395761 NSFP46459 744 aaKnown RBP17.25■□□□□ 0.35
CXCL1-201ENST00000395761 GALK1P51570 392 aa17.25■□□□□ 0.35
CXCL1-201ENST00000395761 TBX4P57082 545 aa17.25■□□□□ 0.35
CXCL1-201ENST00000395761 FAM102AQ5T9C2 384 aaPredicted RBP17.25■□□□□ 0.35
CXCL1-201ENST00000395761 PHF13Q86YI8 300 aaPredicted RBP17.25■□□□□ 0.35
CXCL1-201ENST00000395761 CCDC105Q8IYK2 499 aa17.25■□□□□ 0.35
CXCL1-201ENST00000395761 MSANTD4Q8NCY6 345 aa17.25■□□□□ 0.35
CXCL1-201ENST00000395761 SYN2Q92777 582 aaPredicted RBP17.25■□□□□ 0.35
CXCL1-201ENST00000395761 P2RY11Q96G91 374 aa17.25■□□□□ 0.35
CXCL1-201ENST00000395761 MSANTD3Q96H12 275 aa17.25■□□□□ 0.35
CXCL1-201ENST00000395761 PDLIM2Q96JY6 352 aa17.25■□□□□ 0.35
CXCL1-201ENST00000395761 NELL2Q99435 816 aa17.25■□□□□ 0.35
CXCL1-201ENST00000395761 DCLK3Q9C098 648 aa17.25■□□□□ 0.35
CXCL1-201ENST00000395761 SPHK2Q9NRA0 654 aa17.25■□□□□ 0.35
CXCL1-201ENST00000395761 ADAM22Q9P0K1 906 aa17.25■□□□□ 0.35
CXCL1-201ENST00000395761 MRPS17Q9Y2R5 130 aaKnown RBP17.25■□□□□ 0.35
CXCL1-201ENST00000395761 F5P12259 2224 aa17.25■□□□□ 0.35
CXCL1-201ENST00000395761 ZDBF2Q9HCK1 2354 aa17.24■□□□□ 0.35
CXCL1-201ENST00000395761 DDX3XO00571 662 aaKnown RBP eCLIP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms