RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 TAF4BQ92750 862 aa22.24■■□□□ 1.15
TRAF4-203ENST00000394925 TOE1Q96GM8 510 aaKnown RBP22.24■■□□□ 1.15
TRAF4-203ENST00000394925 TWNKQ96RR1 684 aa22.24■■□□□ 1.15
TRAF4-203ENST00000394925 HNRNPABQ99729 332 aaKnown RBP22.24■■□□□ 1.15
TRAF4-203ENST00000394925 PRDM16Q9HAZ2 1276 aa22.24■■□□□ 1.15
TRAF4-203ENST00000394925 NAGPAQ9UK23 515 aa22.24■■□□□ 1.15
TRAF4-203ENST00000394925 MEI4A8MW99 385 aa22.23■■□□□ 1.15
TRAF4-203ENST00000394925 STC2O76061 302 aa22.23■■□□□ 1.15
TRAF4-203ENST00000394925 ASS1P00966 412 aaKnown RBP22.23■■□□□ 1.15
TRAF4-203ENST00000394925 FTH1P19P0C7X4 201 aa22.23■■□□□ 1.15
TRAF4-203ENST00000394925 TRIM21P19474 475 aaKnown RBP22.23■■□□□ 1.15
TRAF4-203ENST00000394925 STK4Q13043 487 aa22.23■■□□□ 1.15
TRAF4-203ENST00000394925 FOXD4L6Q3SYB3 417 aaPredicted RBP22.23■■□□□ 1.15
TRAF4-203ENST00000394925 KLHDC10Q6PID8 442 aa22.23■■□□□ 1.15
TRAF4-203ENST00000394925 FOXD4L3Q6VB84 417 aaPredicted RBP22.23■■□□□ 1.15
TRAF4-203ENST00000394925 PROSER1Q86XN7 944 aa22.23■■□□□ 1.15
TRAF4-203ENST00000394925 SLC9A9Q8IVB4 645 aa22.23■■□□□ 1.15
TRAF4-203ENST00000394925 CYFIP2Q96F07 1278 aa22.23■■□□□ 1.15
TRAF4-203ENST00000394925 GPR174Q9BXC1 333 aa22.23■■□□□ 1.15
TRAF4-203ENST00000394925 FAM13BQ9NYF5 915 aa22.23■■□□□ 1.15
TRAF4-203ENST00000394925 WSB2Q9NYS7 404 aaPredicted RBP22.23■■□□□ 1.15
TRAF4-203ENST00000394925 FBXO10Q9UK96 956 aa22.23■■□□□ 1.15
TRAF4-203ENST00000394925 PCDHA5Q9Y5H7 936 aa22.23■■□□□ 1.15
TRAF4-203ENST00000394925 HLA-DRAP01903 254 aa22.22■■□□□ 1.15
TRAF4-203ENST00000394925 CAPNS1P04632 268 aa22.22■■□□□ 1.15
TRAF4-203ENST00000394925 PIK3CAP42336 1068 aa22.22■■□□□ 1.15
TRAF4-203ENST00000394925 SCAPQ12770 1279 aa22.22■■□□□ 1.15
TRAF4-203ENST00000394925 ZCCHC9Q8N567 271 aaKnown RBP22.22■■□□□ 1.15
TRAF4-203ENST00000394925 KIAA0895Q8NCT3 520 aa22.22■■□□□ 1.15
TRAF4-203ENST00000394925 ADAMTS14Q8WXS8 1223 aa22.22■■□□□ 1.15
TRAF4-203ENST00000394925 ZDHHC5Q9C0B5 715 aa22.22■■□□□ 1.15
TRAF4-203ENST00000394925 MKRN2Q9H000 416 aaKnown RBP22.22■■□□□ 1.15
TRAF4-203ENST00000394925 MIR1-1HGQ9H1L0 117 aa22.22■■□□□ 1.15
TRAF4-203ENST00000394925 A0A1B0GTW7 788 aa22.21■■□□□ 1.15
TRAF4-203ENST00000394925 KLRC4O43908 158 aa22.21■■□□□ 1.15
TRAF4-203ENST00000394925 KIF20AO95235 890 aa22.21■■□□□ 1.15
TRAF4-203ENST00000394925 KLKB1P03952 638 aa22.21■■□□□ 1.15
TRAF4-203ENST00000394925 NR3C1P04150 777 aa22.21■■□□□ 1.15
TRAF4-203ENST00000394925 NCAM1P13591 858 aa22.21■■□□□ 1.15
TRAF4-203ENST00000394925 IL12RB1P42701 662 aa22.21■■□□□ 1.15
TRAF4-203ENST00000394925 KIF11P52732 1056 aa22.21■■□□□ 1.15
TRAF4-203ENST00000394925 MFAP3P55082 362 aa22.21■■□□□ 1.15
TRAF4-203ENST00000394925 ACAP1Q15027 740 aa22.21■■□□□ 1.15
TRAF4-203ENST00000394925 GEN1Q17RS7 908 aa22.21■■□□□ 1.15
TRAF4-203ENST00000394925 CEP135Q66GS9 1140 aa22.21■■□□□ 1.15
TRAF4-203ENST00000394925 SCD5Q86SK9 330 aa22.21■■□□□ 1.15
TRAF4-203ENST00000394925 METTL3Q86U44 580 aaKnown RBP22.21■■□□□ 1.15
TRAF4-203ENST00000394925 TMC2Q8TDI7 906 aa22.21■■□□□ 1.15
TRAF4-203ENST00000394925 DNASE2BQ8WZ79 361 aa22.21■■□□□ 1.15
TRAF4-203ENST00000394925 NT5C1AQ9BXI3 368 aa22.21■■□□□ 1.15
TRAF4-203ENST00000394925 KCTD10Q9H3F6 313 aa22.21■■□□□ 1.15
TRAF4-203ENST00000394925 PNPLA8Q9NP80 782 aa22.21■■□□□ 1.15
TRAF4-203ENST00000394925 ITM2CQ9NQX7 267 aa22.21■■□□□ 1.15
TRAF4-203ENST00000394925 EXOC1Q9NV70 894 aa22.21■■□□□ 1.15
TRAF4-203ENST00000394925 USP36Q9P275 1121 aaKnown RBP22.21■■□□□ 1.15
TRAF4-203ENST00000394925 THAP10Q9P2Z0 257 aaPredicted RBP22.21■■□□□ 1.15
TRAF4-203ENST00000394925 PCDHA7Q9UN72 937 aa22.21■■□□□ 1.15
TRAF4-203ENST00000394925 SLC27A6Q9Y2P4 619 aa22.21■■□□□ 1.15
TRAF4-203ENST00000394925 KNL1Q8NG31 2342 aa22.21■■□□□ 1.15
TRAF4-203ENST00000394925 ADAMTS20P59510 1910 aa22.2■■□□□ 1.14
TRAF4-203ENST00000394925 PLXNB3Q9ULL4 1909 aa22.2■■□□□ 1.14
TRAF4-203ENST00000394925 KCNJ18B7U540 433 aa22.2■■□□□ 1.14
TRAF4-203ENST00000394925 PENKP01210 267 aaPredicted RBP22.2■■□□□ 1.14
TRAF4-203ENST00000394925 HMBSP08397 361 aa22.2■■□□□ 1.14
TRAF4-203ENST00000394925 ME1P48163 572 aa22.2■■□□□ 1.14
TRAF4-203ENST00000394925 INCA1Q0VD86 236 aa22.2■■□□□ 1.14
TRAF4-203ENST00000394925 C1orf220Q5T0J3 134 aa22.2■■□□□ 1.14
TRAF4-203ENST00000394925 TADA2BQ86TJ2 420 aa22.2■■□□□ 1.14
TRAF4-203ENST00000394925 CEP57L1Q8IYX8 460 aa22.2■■□□□ 1.14
TRAF4-203ENST00000394925 BACH2Q9BYV9 841 aa22.2■■□□□ 1.14
TRAF4-203ENST00000394925 SERTAD1Q9UHV2 236 aa22.2■■□□□ 1.14
TRAF4-203ENST00000394925 RASAL2Q9UJF2 1139 aa22.2■■□□□ 1.14
TRAF4-203ENST00000394925 ZNF510Q9Y2H8 683 aa22.2■■□□□ 1.14
TRAF4-203ENST00000394925 ACACAQ13085 2346 aa22.2■■□□□ 1.14
TRAF4-203ENST00000394925 K7ELQ4 463 aaPredicted RBP22.19■■□□□ 1.14
TRAF4-203ENST00000394925 IKBKBO14920 756 aa22.19■■□□□ 1.14
TRAF4-203ENST00000394925 RALAP11233 206 aa22.19■■□□□ 1.14
TRAF4-203ENST00000394925 CD58P19256 250 aa22.19■■□□□ 1.14
TRAF4-203ENST00000394925 PSEN1P49768 467 aa22.19■■□□□ 1.14
TRAF4-203ENST00000394925 KMT5BQ4FZB7 885 aa22.19■■□□□ 1.14
TRAF4-203ENST00000394925 DCAF12L1Q5VU92 463 aa22.19■■□□□ 1.14
TRAF4-203ENST00000394925 FYB2Q5VWT5 728 aa22.19■■□□□ 1.14
TRAF4-203ENST00000394925 RESP18Q5W5W9 173 aa22.19■■□□□ 1.14
TRAF4-203ENST00000394925 C19orf48Q6RUI8 117 aa22.19■■□□□ 1.14
TRAF4-203ENST00000394925 CCDC186Q7Z3E2 898 aa22.19■■□□□ 1.14
TRAF4-203ENST00000394925 TMPRSS6Q8IU80 811 aa22.19■■□□□ 1.14
TRAF4-203ENST00000394925 CADM4Q8NFZ8 388 aa22.19■■□□□ 1.14
TRAF4-203ENST00000394925 SETD7Q8WTS6 366 aaKnown RBP22.19■■□□□ 1.14
TRAF4-203ENST00000394925 TMEM174Q8WUU8 243 aa22.19■■□□□ 1.14
TRAF4-203ENST00000394925 UCMAQ8WVF2 138 aa22.19■■□□□ 1.14
TRAF4-203ENST00000394925 SIPA1Q96FS4 1042 aa22.19■■□□□ 1.14
TRAF4-203ENST00000394925 IL21RQ9HBE5 538 aa22.19■■□□□ 1.14
TRAF4-203ENST00000394925 APOBEC2Q9Y235 224 aaKnown RBP22.19■■□□□ 1.14
TRAF4-203ENST00000394925 PDXKO00764 312 aa22.18■■□□□ 1.14
TRAF4-203ENST00000394925 NPC1O15118 1278 aa22.18■■□□□ 1.14
TRAF4-203ENST00000394925 SYNCRIPO60506 623 aaKnown RBP22.18■■□□□ 1.14
TRAF4-203ENST00000394925 CORO1AP31146 461 aaKnown RBP22.18■■□□□ 1.14
TRAF4-203ENST00000394925 CHKAP35790 457 aa22.18■■□□□ 1.14
TRAF4-203ENST00000394925 TPMTP51580 245 aa22.18■■□□□ 1.14
TRAF4-203ENST00000394925 ZNF132P52740 706 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms