RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 XPO6Q96QU8 1125 aaKnown RBP32.14■■■□□ 2.74
CMTM4-202ENST00000394106 TBC1D3BA6NDS4 549 aa32.13■■■□□ 2.73
CMTM4-202ENST00000394106 FOXN3O00409 490 aaPredicted RBP32.13■■■□□ 2.73
CMTM4-202ENST00000394106 TRIM24O15164 1050 aa32.13■■■□□ 2.73
CMTM4-202ENST00000394106 PNMA6AP0CW24 399 aaPredicted RBP32.13■■■□□ 2.73
CMTM4-202ENST00000394106 TIE1P35590 1138 aa32.13■■■□□ 2.73
CMTM4-202ENST00000394106 ACADSBP45954 432 aa32.13■■■□□ 2.73
CMTM4-202ENST00000394106 MEA1Q16626 185 aa32.13■■■□□ 2.73
CMTM4-202ENST00000394106 PREPLQ4J6C6 727 aaPredicted RBP32.13■■■□□ 2.73
CMTM4-202ENST00000394106 CDKAL1Q5VV42 579 aa32.13■■■□□ 2.73
CMTM4-202ENST00000394106 GRAMD4Q6IC98 578 aa32.13■■■□□ 2.73
CMTM4-202ENST00000394106 WDR5BQ86VZ2 330 aa32.13■■■□□ 2.73
CMTM4-202ENST00000394106 LSM14BQ9BX40 385 aaKnown RBP32.13■■■□□ 2.73
CMTM4-202ENST00000394106 VPS16Q9H269 839 aa32.13■■■□□ 2.73
CMTM4-202ENST00000394106 FANCLQ9NW38 375 aa32.13■■■□□ 2.73
CMTM4-202ENST00000394106 PLK2Q9NYY3 685 aa32.13■■■□□ 2.73
CMTM4-202ENST00000394106 A0A0A0MRY4 1105 aa32.12■■■□□ 2.73
CMTM4-202ENST00000394106 MSI1O43347 362 aaKnown RBP32.12■■■□□ 2.73
CMTM4-202ENST00000394106 HRO43593 1189 aa32.12■■■□□ 2.73
CMTM4-202ENST00000394106 CACNG3O60359 315 aa32.12■■■□□ 2.73
CMTM4-202ENST00000394106 TNFRSF4P43489 277 aa32.12■■■□□ 2.73
CMTM4-202ENST00000394106 MRPS21P82921 87 aaKnown RBP32.12■■■□□ 2.73
CMTM4-202ENST00000394106 PTK2Q05397 1052 aa32.12■■■□□ 2.73
CMTM4-202ENST00000394106 RAPGEF1Q13905 1077 aa32.12■■■□□ 2.73
CMTM4-202ENST00000394106 EMC10Q5UCC4 262 aa32.12■■■□□ 2.73
CMTM4-202ENST00000394106 DPY19L2P1Q6NXN4 242 aa32.12■■■□□ 2.73
CMTM4-202ENST00000394106 PRR23BQ6ZRT6 265 aa32.12■■■□□ 2.73
CMTM4-202ENST00000394106 CYTH4Q9UIA0 394 aa32.12■■■□□ 2.73
CMTM4-202ENST00000394106 HBS1LQ9Y450 684 aaKnown RBP32.12■■■□□ 2.73
CMTM4-202ENST00000394106 CHKAP35790 457 aa32.11■■■□□ 2.73
CMTM4-202ENST00000394106 RPL34P49207 117 aaKnown RBP32.11■■■□□ 2.73
CMTM4-202ENST00000394106 HARS2P49590 506 aaKnown RBP32.11■■■□□ 2.73
CMTM4-202ENST00000394106 KRT31Q15323 416 aa32.11■■■□□ 2.73
CMTM4-202ENST00000394106 TRIP4Q15650 581 aaPredicted RBP32.11■■■□□ 2.73
CMTM4-202ENST00000394106 LPAL2Q16609 132 aa32.11■■■□□ 2.73
CMTM4-202ENST00000394106 C10orf76Q5T2E6 689 aa32.11■■■□□ 2.73
CMTM4-202ENST00000394106 PASD1Q8IV76 773 aa32.11■■■□□ 2.73
CMTM4-202ENST00000394106 CAMKK1Q8N5S9 505 aa32.11■■■□□ 2.73
CMTM4-202ENST00000394106 ALLCQ8N6M5 410 aa32.11■■■□□ 2.73
CMTM4-202ENST00000394106 STK32AQ8WU08 396 aa32.11■■■□□ 2.73
CMTM4-202ENST00000394106 SLC4A5Q9BY07 1137 aa32.11■■■□□ 2.73
CMTM4-202ENST00000394106 ZDHHC4Q9NPG8 344 aa32.11■■■□□ 2.73
CMTM4-202ENST00000394106 TMEM63CQ9P1W3 806 aa32.11■■■□□ 2.73
CMTM4-202ENST00000394106 RAB23Q9ULC3 237 aa32.11■■■□□ 2.73
CMTM4-202ENST00000394106 FHOD1Q9Y613 1164 aa32.11■■■□□ 2.73
CMTM4-202ENST00000394106 KLF8O95600 359 aaPredicted RBP32.1■■■□□ 2.73
CMTM4-202ENST00000394106 TPM2P07951 284 aa32.1■■■□□ 2.73
CMTM4-202ENST00000394106 SIM2Q14190 667 aaPredicted RBP32.1■■■□□ 2.73
CMTM4-202ENST00000394106 KLHDC7AQ5VTJ3 777 aa32.1■■■□□ 2.73
CMTM4-202ENST00000394106 MSANTD2Q6P1R3 559 aa32.1■■■□□ 2.73
CMTM4-202ENST00000394106 NUDT18Q6ZVK8 323 aa32.1■■■□□ 2.73
CMTM4-202ENST00000394106 TERB1Q8NA31 727 aa32.1■■■□□ 2.73
CMTM4-202ENST00000394106 RUBCNQ92622 972 aa32.1■■■□□ 2.73
CMTM4-202ENST00000394106 FAM149B1Q96BN6 582 aa32.1■■■□□ 2.73
CMTM4-202ENST00000394106 NCDNQ9UBB6 729 aa32.1■■■□□ 2.73
CMTM4-202ENST00000394106 MMP17Q9ULZ9 603 aa32.1■■■□□ 2.73
CMTM4-202ENST00000394106 E5RJQ4 531 aa32.09■■■□□ 2.73
CMTM4-202ENST00000394106 SART1O43290 800 aaKnown RBP32.09■■■□□ 2.73
CMTM4-202ENST00000394106 CNR2P34972 360 aa32.09■■■□□ 2.73
CMTM4-202ENST00000394106 CLCN1P35523 988 aa32.09■■■□□ 2.73
CMTM4-202ENST00000394106 MYL5Q02045 173 aa32.09■■■□□ 2.73
CMTM4-202ENST00000394106 PDCLQ13371 301 aa32.09■■■□□ 2.73
CMTM4-202ENST00000394106 DRAP1Q14919 205 aaPredicted RBP32.09■■■□□ 2.73
CMTM4-202ENST00000394106 SLC47A2Q86VL8 602 aa32.09■■■□□ 2.73
CMTM4-202ENST00000394106 TXNDC5Q8NBS9 432 aaKnown RBP32.09■■■□□ 2.73
CMTM4-202ENST00000394106 APBB3O95704 486 aa32.08■■■□□ 2.73
CMTM4-202ENST00000394106 NCAM1P13591 858 aa32.08■■■□□ 2.73
CMTM4-202ENST00000394106 KIR2DL1P43626 348 aaPredicted RBP32.08■■■□□ 2.73
CMTM4-202ENST00000394106 CEP68Q76N32 757 aa32.08■■■□□ 2.73
CMTM4-202ENST00000394106 FAM71AQ8IYT1 594 aa32.08■■■□□ 2.73
CMTM4-202ENST00000394106 DCLK2Q8N568 766 aa32.08■■■□□ 2.73
CMTM4-202ENST00000394106 IL17RCQ8NAC3 791 aa32.08■■■□□ 2.73
CMTM4-202ENST00000394106 TSTD1Q8NFU3 115 aa32.08■■■□□ 2.73
CMTM4-202ENST00000394106 P2RY11Q96G91 374 aa32.08■■■□□ 2.73
CMTM4-202ENST00000394106 RIF1Q5UIP0 2472 aaKnown RBP32.07■■■□□ 2.72
CMTM4-202ENST00000394106 PAPSS1O43252 624 aaPredicted RBP32.07■■■□□ 2.72
CMTM4-202ENST00000394106 CYBBP04839 570 aa32.07■■■□□ 2.72
CMTM4-202ENST00000394106 KRT9P35527 623 aa32.07■■■□□ 2.72
CMTM4-202ENST00000394106 DGKGP49619 791 aa32.07■■■□□ 2.72
CMTM4-202ENST00000394106 TYRO3Q06418 890 aa32.07■■■□□ 2.72
CMTM4-202ENST00000394106 SMYD5Q6GMV2 418 aa32.07■■■□□ 2.72
CMTM4-202ENST00000394106 TOGARAM2Q6ZUX3 1019 aa32.07■■■□□ 2.72
CMTM4-202ENST00000394106 TMEM110Q86TL2 294 aa32.07■■■□□ 2.72
CMTM4-202ENST00000394106 PCDHGC3Q9UN70 934 aa32.07■■■□□ 2.72
CMTM4-202ENST00000394106 NAALADL1Q9UQQ1 740 aa32.07■■■□□ 2.72
CMTM4-202ENST00000394106 FAM186AA6NE01 2351 aa32.07■■■□□ 2.72
CMTM4-202ENST00000394106 CCDC163A0A0D9SF12 145 aa32.06■■■□□ 2.72
CMTM4-202ENST00000394106 AXIN1O15169 862 aa32.06■■■□□ 2.72
CMTM4-202ENST00000394106 PENKP01210 267 aaPredicted RBP32.06■■■□□ 2.72
CMTM4-202ENST00000394106 FYNP06241 537 aa32.06■■■□□ 2.72
CMTM4-202ENST00000394106 CHRM1P11229 460 aaPredicted RBP32.06■■■□□ 2.72
CMTM4-202ENST00000394106 UCHL3P15374 230 aa32.06■■■□□ 2.72
CMTM4-202ENST00000394106 FYB2Q5VWT5 728 aa32.06■■■□□ 2.72
CMTM4-202ENST00000394106 CPXM2Q8N436 756 aa32.06■■■□□ 2.72
CMTM4-202ENST00000394106 WDTC1Q8N5D0 677 aa32.06■■■□□ 2.72
CMTM4-202ENST00000394106 ZNF513Q8N8E2 541 aaPredicted RBP32.06■■■□□ 2.72
CMTM4-202ENST00000394106 TJP2Q9UDY2 1190 aa32.06■■■□□ 2.72
CMTM4-202ENST00000394106 SGK1O00141 431 aa32.05■■■□□ 2.72
CMTM4-202ENST00000394106 BPIFB4P59827 614 aa32.05■■■□□ 2.72
CMTM4-202ENST00000394106 HSF5Q4G112 596 aaPredicted RBP32.05■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms