RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 USH1CQ9Y6N9 552 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 SCN10AQ9Y5Y9 1956 aa7.45□□□□□ -1.22
SMAD1-202ENST00000394092 TCRBV9S1A1TA0A576 114 aa7.45□□□□□ -1.22
SMAD1-202ENST00000394092 MANSC4A6NHS7 340 aaPredicted RBP7.45□□□□□ -1.22
SMAD1-202ENST00000394092 PPP1R12AO14974 1030 aaPredicted RBP7.45□□□□□ -1.22
SMAD1-202ENST00000394092 TREHO43280 583 aa7.45□□□□□ -1.22
SMAD1-202ENST00000394092 EDF1O60869 148 aaKnown RBP7.45□□□□□ -1.22
SMAD1-202ENST00000394092 KRT38O76015 456 aa7.45□□□□□ -1.22
SMAD1-202ENST00000394092 UBOX5O94941 541 aa7.45□□□□□ -1.22
SMAD1-202ENST00000394092 FBXO21O94952 628 aa7.45□□□□□ -1.22
SMAD1-202ENST00000394092 APRTP07741 180 aa7.45□□□□□ -1.22
SMAD1-202ENST00000394092 PDGFRBP09619 1106 aa7.45□□□□□ -1.22
SMAD1-202ENST00000394092 NPR3P17342 541 aa7.45□□□□□ -1.22
SMAD1-202ENST00000394092 HOXC8P31273 242 aa7.45□□□□□ -1.22
SMAD1-202ENST00000394092 NOS2P35228 1153 aa7.45□□□□□ -1.22
SMAD1-202ENST00000394092 SULT1E1P49888 294 aa7.45□□□□□ -1.22
SMAD1-202ENST00000394092 BNIP1Q12981 228 aa7.45□□□□□ -1.22
SMAD1-202ENST00000394092 DNAJC3Q13217 504 aa7.45□□□□□ -1.22
SMAD1-202ENST00000394092 EFTUD2Q15029 972 aaKnown RBP eCLIP7.45□□□□□ -1.22
SMAD1-202ENST00000394092 TAF1CQ15572 869 aaPredicted RBP7.45□□□□□ -1.22
SMAD1-202ENST00000394092 CA9Q16790 459 aa7.45□□□□□ -1.22
SMAD1-202ENST00000394092 FAM133BQ5BKY9 247 aaKnown RBP7.45□□□□□ -1.22
SMAD1-202ENST00000394092 SPDYAQ5MJ70 313 aa7.45□□□□□ -1.22
SMAD1-202ENST00000394092 UBXN11Q5T124 520 aa7.45□□□□□ -1.22
SMAD1-202ENST00000394092 TTC39BQ5VTQ0 682 aaPredicted RBP7.45□□□□□ -1.22
SMAD1-202ENST00000394092 PDZD4Q76G19 769 aaPredicted RBP7.45□□□□□ -1.22
SMAD1-202ENST00000394092 CHSY1Q86X52 802 aa7.45□□□□□ -1.22
SMAD1-202ENST00000394092 TRIM42Q8IWZ5 723 aa7.45□□□□□ -1.22
SMAD1-202ENST00000394092 PARP9Q8IXQ6 854 aa7.45□□□□□ -1.22
SMAD1-202ENST00000394092 SIX6OS1Q8N1H7 587 aa7.45□□□□□ -1.22
SMAD1-202ENST00000394092 TMEM86AQ8N2M4 240 aa7.45□□□□□ -1.22
SMAD1-202ENST00000394092 TAB3Q8N5C8 712 aaPredicted RBP7.45□□□□□ -1.22
SMAD1-202ENST00000394092 BANPQ8N9N5 519 aa7.45□□□□□ -1.22
SMAD1-202ENST00000394092 MZB1Q8WU39 189 aa7.45□□□□□ -1.22
SMAD1-202ENST00000394092 TFB1MQ8WVM0 346 aaKnown RBP7.45□□□□□ -1.22
SMAD1-202ENST00000394092 TMEM40Q8WWA1 233 aa7.45□□□□□ -1.22
SMAD1-202ENST00000394092 KCTD13Q8WZ19 329 aa7.45□□□□□ -1.22
SMAD1-202ENST00000394092 KHSRPQ92945 711 aaKnown RBP eCLIP7.45□□□□□ -1.22
SMAD1-202ENST00000394092 FAM149B1Q96BN6 582 aa7.45□□□□□ -1.22
SMAD1-202ENST00000394092 MTBPQ96DY7 904 aa7.45□□□□□ -1.22
SMAD1-202ENST00000394092 CFAP36Q96G28 342 aa7.45□□□□□ -1.22
SMAD1-202ENST00000394092 CSPG4P5Q96PW8 444 aa7.45□□□□□ -1.22
SMAD1-202ENST00000394092 KCTD15Q96SI1 283 aaPredicted RBP7.45□□□□□ -1.22
SMAD1-202ENST00000394092 PTPN18Q99952 460 aa7.45□□□□□ -1.22
SMAD1-202ENST00000394092 WDR83Q9BRX9 315 aaKnown RBP7.45□□□□□ -1.22
SMAD1-202ENST00000394092 B3GNT5Q9BYG0 378 aa7.45□□□□□ -1.22
SMAD1-202ENST00000394092 VPS11Q9H270 941 aa7.45□□□□□ -1.22
SMAD1-202ENST00000394092 KIF9Q9HAQ2 790 aa7.45□□□□□ -1.22
SMAD1-202ENST00000394092 LRRC4Q9HBW1 653 aa7.45□□□□□ -1.22
SMAD1-202ENST00000394092 ZC3H7BQ9UGR2 993 aaKnown RBP7.45□□□□□ -1.22
SMAD1-202ENST00000394092 CPA4Q9UI42 421 aa7.45□□□□□ -1.22
SMAD1-202ENST00000394092 NME7Q9Y5B8 376 aa7.45□□□□□ -1.22
SMAD1-202ENST00000394092 TDRD15B5MCY1 1934 aaKnown RBP7.45□□□□□ -1.22
SMAD1-202ENST00000394092 ZNF638Q14966 1978 aaKnown RBP7.45□□□□□ -1.22
SMAD1-202ENST00000394092 A0A1W2PPM1 405 aa7.44□□□□□ -1.22
SMAD1-202ENST00000394092 FOXO6A8MYZ6 492 aa7.44□□□□□ -1.22
SMAD1-202ENST00000394092 CHUKO15111 745 aa7.44□□□□□ -1.22
SMAD1-202ENST00000394092 LPXNO60711 386 aa7.44□□□□□ -1.22
SMAD1-202ENST00000394092 HNRNPCL1O60812 293 aaKnown RBP7.44□□□□□ -1.22
SMAD1-202ENST00000394092 FAM155BO75949 473 aa7.44□□□□□ -1.22
SMAD1-202ENST00000394092 SNRPAP09012 282 aaKnown RBP7.44□□□□□ -1.22
SMAD1-202ENST00000394092 FAM200BP0CF97 657 aa7.44□□□□□ -1.22
SMAD1-202ENST00000394092 FGFR1P11362 822 aa7.44□□□□□ -1.22
SMAD1-202ENST00000394092 MLNP12872 115 aa7.44□□□□□ -1.22
SMAD1-202ENST00000394092 AKR1A1P14550 325 aa7.44□□□□□ -1.22
SMAD1-202ENST00000394092 HOXB1P14653 301 aaPredicted RBP7.44□□□□□ -1.22
SMAD1-202ENST00000394092 PRKCHP24723 683 aa7.44□□□□□ -1.22
SMAD1-202ENST00000394092 CNTFP26441 200 aa7.44□□□□□ -1.22
SMAD1-202ENST00000394092 FOXN2P32314 431 aa7.44□□□□□ -1.22
SMAD1-202ENST00000394092 SLC8A1P32418 973 aa7.44□□□□□ -1.22
SMAD1-202ENST00000394092 LHX1P48742 406 aa7.44□□□□□ -1.22
SMAD1-202ENST00000394092 SERPINB9P50453 376 aa7.44□□□□□ -1.22
SMAD1-202ENST00000394092 MNAT1P51948 309 aa7.44□□□□□ -1.22
SMAD1-202ENST00000394092 ZNF135P52742 658 aaPredicted RBP7.44□□□□□ -1.22
SMAD1-202ENST00000394092 LILRA4P59901 499 aa7.44□□□□□ -1.22
SMAD1-202ENST00000394092 MRPS5P82675 430 aaKnown RBP7.44□□□□□ -1.22
SMAD1-202ENST00000394092 MRPS6P82932 125 aaKnown RBP7.44□□□□□ -1.22
SMAD1-202ENST00000394092 ADIGQ0VDE8 80 aa7.44□□□□□ -1.22
SMAD1-202ENST00000394092 SEMA5AQ13591 1074 aa7.44□□□□□ -1.22
SMAD1-202ENST00000394092 FSCN1Q16658 493 aaKnown RBP7.44□□□□□ -1.22
SMAD1-202ENST00000394092 SPRED3Q2MJR0 410 aa7.44□□□□□ -1.22
SMAD1-202ENST00000394092 KBTBD12Q3ZCT8 623 aa7.44□□□□□ -1.22
SMAD1-202ENST00000394092 GALNTL6Q49A17 601 aa7.44□□□□□ -1.22
SMAD1-202ENST00000394092 RAB6CQ53S08 254 aa7.44□□□□□ -1.22
SMAD1-202ENST00000394092 PRAMEF19Q5SWL8 479 aa7.44□□□□□ -1.22
SMAD1-202ENST00000394092 FAM47EQ6ZV65 393 aa7.44□□□□□ -1.22
SMAD1-202ENST00000394092 PIGZQ86VD9 579 aa7.44□□□□□ -1.22
SMAD1-202ENST00000394092 LRRC6Q86X45 466 aa7.44□□□□□ -1.22
SMAD1-202ENST00000394092 CCNJLQ8IV13 435 aa7.44□□□□□ -1.22
SMAD1-202ENST00000394092 GSDMBQ8TAX9 411 aa7.44□□□□□ -1.22
SMAD1-202ENST00000394092 TCP10LQ8TDR4 215 aa7.44□□□□□ -1.22
SMAD1-202ENST00000394092 HTR3CQ8WXA8 447 aa7.44□□□□□ -1.22
SMAD1-202ENST00000394092 RAB3IPQ96QF0 476 aaPredicted RBP7.44□□□□□ -1.22
SMAD1-202ENST00000394092 MED10Q9BTT4 135 aa7.44□□□□□ -1.22
SMAD1-202ENST00000394092 RAB6CQ9H0N0 254 aa7.44□□□□□ -1.22
SMAD1-202ENST00000394092 CXCL16Q9H2A7 254 aa7.44□□□□□ -1.22
SMAD1-202ENST00000394092 ECT2Q9H8V3 914 aa7.44□□□□□ -1.22
SMAD1-202ENST00000394092 ETNK1Q9HBU6 452 aa7.44□□□□□ -1.22
SMAD1-202ENST00000394092 POPDC2Q9HBU9 364 aa7.44□□□□□ -1.22
SMAD1-202ENST00000394092 EIF2B3Q9NR50 452 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms