RNA–Protein interactions for RNA: ENST00000394074.6

NAE1-204, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 5 BASIC

Gene NAE1, Length 1,654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-204ENST00000394074 ZNF252P-AS1Q0IIN9 211 aa23.23■■□□□ 1.31
NAE1-204ENST00000394074 NME3Q13232 169 aa23.23■■□□□ 1.31
NAE1-204ENST00000394074 SMAD4Q13485 552 aaKnown RBP23.23■■□□□ 1.31
NAE1-204ENST00000394074 MESDQ14696 234 aa23.23■■□□□ 1.31
NAE1-204ENST00000394074 IFI16Q16666 785 aaKnown RBP23.23■■□□□ 1.31
NAE1-204ENST00000394074 NPAS3Q8IXF0 933 aa23.23■■□□□ 1.31
NAE1-204ENST00000394074 SUSD6Q92537 303 aa23.23■■□□□ 1.31
NAE1-204ENST00000394074 FGF13Q92913 245 aa23.23■■□□□ 1.31
NAE1-204ENST00000394074 NT5C3BQ969T7 300 aa23.23■■□□□ 1.31
NAE1-204ENST00000394074 SERPINB11Q96P15 392 aa23.23■■□□□ 1.31
NAE1-204ENST00000394074 LCMT1Q9UIC8 334 aa23.23■■□□□ 1.31
NAE1-204ENST00000394074 OBSL1O75147 1896 aa23.23■■□□□ 1.31
NAE1-204ENST00000394074 TMEM110-MUSTN1A8MSY1 372 aa23.22■■□□□ 1.31
NAE1-204ENST00000394074 OLFM2O95897 454 aa23.22■■□□□ 1.31
NAE1-204ENST00000394074 GBP1P32455 592 aa23.22■■□□□ 1.31
NAE1-204ENST00000394074 PIGHQ14442 188 aaPredicted RBP23.22■■□□□ 1.31
NAE1-204ENST00000394074 REXO1L1PQ8IX06 675 aa23.22■■□□□ 1.31
NAE1-204ENST00000394074 CMTM8Q8IZV2 173 aa23.22■■□□□ 1.31
NAE1-204ENST00000394074 CCAR2Q8N163 923 aaKnown RBP23.22■■□□□ 1.31
NAE1-204ENST00000394074 FAM172AQ8WUF8 416 aa23.22■■□□□ 1.31
NAE1-204ENST00000394074 CALR3Q96L12 384 aaKnown RBP23.22■■□□□ 1.31
NAE1-204ENST00000394074 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.22■■□□□ 1.31
NAE1-204ENST00000394074 SLC12A8A0AV02 714 aa23.22■■□□□ 1.31
NAE1-204ENST00000394074 GRXCR2A6NFK2 248 aa23.22■■□□□ 1.31
NAE1-204ENST00000394074 MSI1O43347 362 aaKnown RBP23.22■■□□□ 1.31
NAE1-204ENST00000394074 RNF8O76064 485 aa23.22■■□□□ 1.31
NAE1-204ENST00000394074 DEUP1Q05D60 604 aa23.22■■□□□ 1.31
NAE1-204ENST00000394074 SH3PXD2AQ5TCZ1 1133 aa23.22■■□□□ 1.31
NAE1-204ENST00000394074 RNF10Q8N5U6 811 aaKnown RBP23.22■■□□□ 1.31
NAE1-204ENST00000394074 TPCN2Q8NHX9 752 aa23.22■■□□□ 1.31
NAE1-204ENST00000394074 KIAA1524Q8TCG1 905 aa23.22■■□□□ 1.31
NAE1-204ENST00000394074 ZSWIM3Q96MP5 696 aa23.22■■□□□ 1.31
NAE1-204ENST00000394074 ADAM33Q9BZ11 813 aa23.22■■□□□ 1.31
NAE1-204ENST00000394074 SMPD4Q9NXE4 827 aa23.22■■□□□ 1.31
NAE1-204ENST00000394074 ZKSCAN5Q9Y2L8 839 aa23.22■■□□□ 1.31
NAE1-204ENST00000394074 DENND4CQ5VZ89 1909 aa23.21■■□□□ 1.31
NAE1-204ENST00000394074 USP27XA6NNY8 438 aa23.21■■□□□ 1.31
NAE1-204ENST00000394074 MBTPS2O43462 519 aa23.21■■□□□ 1.31
NAE1-204ENST00000394074 BUB1BO60566 1050 aaPredicted RBP23.21■■□□□ 1.31
NAE1-204ENST00000394074 PROSCO94903 275 aa23.21■■□□□ 1.31
NAE1-204ENST00000394074 MOCS3O95396 460 aa23.21■■□□□ 1.31
NAE1-204ENST00000394074 F9P00740 461 aa23.21■■□□□ 1.31
NAE1-204ENST00000394074 OTUD1Q5VV17 481 aaPredicted RBP23.21■■□□□ 1.31
NAE1-204ENST00000394074 STRADAQ7RTN6 431 aa23.21■■□□□ 1.31
NAE1-204ENST00000394074 GDE1Q9NZC3 331 aa23.21■■□□□ 1.31
NAE1-204ENST00000394074 CALCOCO1Q9P1Z2 691 aa23.21■■□□□ 1.31
NAE1-204ENST00000394074 CDH7Q9ULB5 785 aa23.21■■□□□ 1.31
NAE1-204ENST00000394074 USTQ9Y2C2 406 aa23.21■■□□□ 1.31
NAE1-204ENST00000394074 CPQQ9Y646 472 aa23.21■■□□□ 1.31
NAE1-204ENST00000394074 PRUNE2Q8WUY3 3088 aa23.2■■□□□ 1.31
NAE1-204ENST00000394074 IRAK2O43187 625 aa23.2■■□□□ 1.3
NAE1-204ENST00000394074 IGLV3-25P01717 112 aa23.2■■□□□ 1.3
NAE1-204ENST00000394074 GBP2P32456 591 aaPredicted RBP23.2■■□□□ 1.3
NAE1-204ENST00000394074 RDXP35241 583 aaKnown RBP23.2■■□□□ 1.3
NAE1-204ENST00000394074 SLC7A9P82251 487 aa23.2■■□□□ 1.3
NAE1-204ENST00000394074 ACAP1Q15027 740 aa23.2■■□□□ 1.3
NAE1-204ENST00000394074 SND1Q7KZF4 910 aaKnown RBP eCLIP23.2■■□□□ 1.3
NAE1-204ENST00000394074 NIPA2Q8N8Q9 360 aa23.2■■□□□ 1.3
NAE1-204ENST00000394074 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.2■■□□□ 1.3
NAE1-204ENST00000394074 ZSCAN18Q8TBC5 510 aaPredicted RBP23.2■■□□□ 1.3
NAE1-204ENST00000394074 CENPIQ92674 756 aaPredicted RBP23.2■■□□□ 1.3
NAE1-204ENST00000394074 RNF34Q969K3 372 aa23.2■■□□□ 1.3
NAE1-204ENST00000394074 PGAP3Q96FM1 320 aaPredicted RBP23.2■■□□□ 1.3
NAE1-204ENST00000394074 SMG9Q9H0W8 520 aaKnown RBP23.2■■□□□ 1.3
NAE1-204ENST00000394074 GOLGA6L9A6NEM1 432 aa23.19■■□□□ 1.3
NAE1-204ENST00000394074 HMBSP08397 361 aa23.19■■□□□ 1.3
NAE1-204ENST00000394074 KPNA1P52294 538 aaPredicted RBP23.19■■□□□ 1.3
NAE1-204ENST00000394074 TBX4P57082 545 aa23.19■■□□□ 1.3
NAE1-204ENST00000394074 COG7P83436 770 aa23.19■■□□□ 1.3
NAE1-204ENST00000394074 LEXMQ3ZCV2 418 aa23.19■■□□□ 1.3
NAE1-204ENST00000394074 POTEHQ6S545 545 aa23.19■■□□□ 1.3
NAE1-204ENST00000394074 DAAM2Q86T65 1068 aa23.19■■□□□ 1.3
NAE1-204ENST00000394074 TTC16Q8NEE8 873 aa23.19■■□□□ 1.3
NAE1-204ENST00000394074 GKN1Q9NS71 199 aa23.19■■□□□ 1.3
NAE1-204ENST00000394074 PIGVQ9NUD9 493 aa23.19■■□□□ 1.3
NAE1-204ENST00000394074 TLR6Q9Y2C9 796 aa23.19■■□□□ 1.3
NAE1-204ENST00000394074 ENDOD1O94919 500 aa23.19■■□□□ 1.3
NAE1-204ENST00000394074 ATXN1P54253 815 aaKnown RBP23.19■■□□□ 1.3
NAE1-204ENST00000394074 HDAC4P56524 1084 aa23.19■■□□□ 1.3
NAE1-204ENST00000394074 NNTQ13423 1086 aa23.19■■□□□ 1.3
NAE1-204ENST00000394074 TRIP4Q15650 581 aaPredicted RBP23.19■■□□□ 1.3
NAE1-204ENST00000394074 RAB6CQ53S08 254 aa23.19■■□□□ 1.3
NAE1-204ENST00000394074 BNIPLQ7Z465 357 aa23.19■■□□□ 1.3
NAE1-204ENST00000394074 ARID3BQ8IVW6 561 aaPredicted RBP23.19■■□□□ 1.3
NAE1-204ENST00000394074 C17orf53Q8N3J3 647 aaPredicted RBP23.19■■□□□ 1.3
NAE1-204ENST00000394074 MYADMQ96S97 322 aa23.19■■□□□ 1.3
NAE1-204ENST00000394074 KLF16Q9BXK1 252 aaPredicted RBP23.19■■□□□ 1.3
NAE1-204ENST00000394074 RAB6CQ9H0N0 254 aa23.19■■□□□ 1.3
NAE1-204ENST00000394074 TDP1Q9NUW8 608 aa23.19■■□□□ 1.3
NAE1-204ENST00000394074 HBS1LQ9Y450 684 aaKnown RBP23.19■■□□□ 1.3
NAE1-204ENST00000394074 LRCH4O75427 683 aa23.18■■□□□ 1.3
NAE1-204ENST00000394074 SSR1P43307 286 aaKnown RBP23.18■■□□□ 1.3
NAE1-204ENST00000394074 DAB2IPQ5VWQ8 1189 aa23.18■■□□□ 1.3
NAE1-204ENST00000394074 SCYL2Q6P3W7 929 aa23.18■■□□□ 1.3
NAE1-204ENST00000394074 FAM131BQ86XD5 332 aa23.18■■□□□ 1.3
NAE1-204ENST00000394074 NCAPGQ9BPX3 1015 aa23.18■■□□□ 1.3
NAE1-204ENST00000394074 GOLPH3Q9H4A6 298 aa23.18■■□□□ 1.3
NAE1-204ENST00000394074 ARHGAP26Q9UNA1 814 aa23.18■■□□□ 1.3
NAE1-204ENST00000394074 CAPN6Q9Y6Q1 641 aa23.18■■□□□ 1.3
NAE1-204ENST00000394074 GRID2IPA4D2P6 1211 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms