RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 ZMIZ2Q8NF64 920 aa19.64■□□□□ 0.73
SNCB-202ENST00000393693 OTUB2Q96DC9 234 aa19.64■□□□□ 0.73
SNCB-202ENST00000393693 SMOQ99835 787 aa19.64■□□□□ 0.73
SNCB-202ENST00000393693 TUBGCP2Q9BSJ2 902 aa19.64■□□□□ 0.73
SNCB-202ENST00000393693 TMEM121BQ9BXQ6 578 aaPredicted RBP19.64■□□□□ 0.73
SNCB-202ENST00000393693 NUSAP1Q9BXS6 441 aaKnown RBP19.64■□□□□ 0.73
SNCB-202ENST00000393693 VPS16Q9H269 839 aa19.64■□□□□ 0.73
SNCB-202ENST00000393693 VRTNQ9H8Y1 702 aa19.64■□□□□ 0.73
SNCB-202ENST00000393693 DMAP1Q9NPF5 467 aaPredicted RBP19.64■□□□□ 0.73
SNCB-202ENST00000393693 SPHK2Q9NRA0 654 aa19.64■□□□□ 0.73
SNCB-202ENST00000393693 DEC1Q9P2X7 70 aa19.64■□□□□ 0.73
SNCB-202ENST00000393693 ZMIZ1Q9ULJ6 1067 aa19.64■□□□□ 0.73
SNCB-202ENST00000393693 ATP8B3O60423 1300 aa19.63■□□□□ 0.73
SNCB-202ENST00000393693 HOXC11O43248 304 aaPredicted RBP19.63■□□□□ 0.73
SNCB-202ENST00000393693 AP1G2O75843 785 aa19.63■□□□□ 0.73
SNCB-202ENST00000393693 VNN1O95497 513 aa19.63■□□□□ 0.73
SNCB-202ENST00000393693 C4BPAP04003 597 aaKnown RBP19.63■□□□□ 0.73
SNCB-202ENST00000393693 CCDC130P13994 396 aa19.63■□□□□ 0.73
SNCB-202ENST00000393693 PRKCSHP14314 528 aaPredicted RBP19.63■□□□□ 0.73
SNCB-202ENST00000393693 GABRG2P18507 467 aa19.63■□□□□ 0.73
SNCB-202ENST00000393693 LMAN2Q12907 356 aa19.63■□□□□ 0.73
SNCB-202ENST00000393693 ZNF667Q5HYK9 610 aa19.63■□□□□ 0.73
SNCB-202ENST00000393693 C10orf76Q5T2E6 689 aa19.63■□□□□ 0.73
SNCB-202ENST00000393693 KIAA1211LQ6NV74 962 aa19.63■□□□□ 0.73
SNCB-202ENST00000393693 PARD3BQ8TEW8 1205 aa19.63■□□□□ 0.73
SNCB-202ENST00000393693 METTL14Q9HCE5 456 aaKnown RBP19.63■□□□□ 0.73
SNCB-202ENST00000393693 KRT82Q9NSB4 513 aa19.63■□□□□ 0.73
SNCB-202ENST00000393693 PILRBQ9UKJ0 227 aa19.63■□□□□ 0.73
SNCB-202ENST00000393693 FAM92AA1XBS5 289 aa19.62■□□□□ 0.73
SNCB-202ENST00000393693 PES1O00541 588 aaKnown RBP19.62■□□□□ 0.73
SNCB-202ENST00000393693 SLC16A3O15427 465 aaKnown RBP19.62■□□□□ 0.73
SNCB-202ENST00000393693 TBX18O95935 607 aa19.62■□□□□ 0.73
SNCB-202ENST00000393693 NR3C1P04150 777 aa19.62■□□□□ 0.73
SNCB-202ENST00000393693 EPB41P11171 864 aaKnown RBP19.62■□□□□ 0.73
SNCB-202ENST00000393693 MARSP56192 900 aaKnown RBP19.62■□□□□ 0.73
SNCB-202ENST00000393693 DLG4P78352 724 aa19.62■□□□□ 0.73
SNCB-202ENST00000393693 NCOA4Q13772 614 aa19.62■□□□□ 0.73
SNCB-202ENST00000393693 MAN2A1Q16706 1144 aa19.62■□□□□ 0.73
SNCB-202ENST00000393693 FKBP15Q5T1M5 1219 aa19.62■□□□□ 0.73
SNCB-202ENST00000393693 TERB1Q8NA31 727 aa19.62■□□□□ 0.73
SNCB-202ENST00000393693 SMARCD1Q96GM5 515 aa19.62■□□□□ 0.73
SNCB-202ENST00000393693 TNIP3Q96KP6 325 aa19.62■□□□□ 0.73
SNCB-202ENST00000393693 ACOX2Q99424 681 aa19.62■□□□□ 0.73
SNCB-202ENST00000393693 SCNM1Q9BWG6 230 aa19.62■□□□□ 0.73
SNCB-202ENST00000393693 ADAM33Q9BZ11 813 aa19.62■□□□□ 0.73
SNCB-202ENST00000393693 NACA2Q9H009 215 aa19.62■□□□□ 0.73
SNCB-202ENST00000393693 HMGXB4Q9UGU5 601 aa19.62■□□□□ 0.73
SNCB-202ENST00000393693 LGALS16A8MUM7 142 aa19.61■□□□□ 0.73
SNCB-202ENST00000393693 GREM1O60565 184 aa19.61■□□□□ 0.73
SNCB-202ENST00000393693 CFIP05156 583 aa19.61■□□□□ 0.73
SNCB-202ENST00000393693 TUBP50607 506 aa19.61■□□□□ 0.73
SNCB-202ENST00000393693 MAP3K7CLP57077 242 aa19.61■□□□□ 0.73
SNCB-202ENST00000393693 RPL6Q02878 288 aaKnown RBP19.61■□□□□ 0.73
SNCB-202ENST00000393693 BYSLQ13895 437 aaKnown RBP19.61■□□□□ 0.73
SNCB-202ENST00000393693 EGFLAMQ63HQ2 1017 aa19.61■□□□□ 0.73
SNCB-202ENST00000393693 SPECC1LQ69YQ0 1117 aa19.61■□□□□ 0.73
SNCB-202ENST00000393693 SLC23A3Q6PIS1 610 aa19.61■□□□□ 0.73
SNCB-202ENST00000393693 SLC2A14Q8TDB8 520 aa19.61■□□□□ 0.73
SNCB-202ENST00000393693 COMMD8Q9NX08 183 aa19.61■□□□□ 0.73
SNCB-202ENST00000393693 CALCOCO1Q9P1Z2 691 aa19.61■□□□□ 0.73
SNCB-202ENST00000393693 ASPMQ8IZT6 3477 aa19.61■□□□□ 0.73
SNCB-202ENST00000393693 TNRC6BQ9UPQ9 1833 aaKnown RBP19.6■□□□□ 0.73
SNCB-202ENST00000393693 SPAARA0A1B0GVQ0 90 aa19.6■□□□□ 0.73
SNCB-202ENST00000393693 A0A1W2PQF6 199 aa19.6■□□□□ 0.73
SNCB-202ENST00000393693 NRDCO43847 1150 aa19.6■□□□□ 0.73
SNCB-202ENST00000393693 TLR5O60602 858 aa19.6■□□□□ 0.73
SNCB-202ENST00000393693 TPM1P09493 284 aa19.6■□□□□ 0.73
SNCB-202ENST00000393693 HOXB2P14652 356 aa19.6■□□□□ 0.73
SNCB-202ENST00000393693 NDST1P52848 882 aa19.6■□□□□ 0.73
SNCB-202ENST00000393693 CLDN10P78369 228 aa19.6■□□□□ 0.73
SNCB-202ENST00000393693 UBXN1Q04323 297 aa19.6■□□□□ 0.73
SNCB-202ENST00000393693 VWA3BQ502W6 1294 aa19.6■□□□□ 0.73
SNCB-202ENST00000393693 SPDYCQ5MJ68 293 aa19.6■□□□□ 0.73
SNCB-202ENST00000393693 PEAR1Q5VY43 1037 aaPredicted RBP19.6■□□□□ 0.73
SNCB-202ENST00000393693 SPOPLQ6IQ16 392 aa19.6■□□□□ 0.73
SNCB-202ENST00000393693 CCDC186Q7Z3E2 898 aa19.6■□□□□ 0.73
SNCB-202ENST00000393693 SLC9A9Q8IVB4 645 aa19.6■□□□□ 0.73
SNCB-202ENST00000393693 C12orf29Q8N999 325 aa19.6■□□□□ 0.73
SNCB-202ENST00000393693 KDF1Q8NAX2 398 aaPredicted RBP19.6■□□□□ 0.73
SNCB-202ENST00000393693 GTPBP2Q9BX10 602 aaKnown RBP19.6■□□□□ 0.73
SNCB-202ENST00000393693 KLF16Q9BXK1 252 aaPredicted RBP19.6■□□□□ 0.73
SNCB-202ENST00000393693 FAM49BQ9NUQ9 324 aa19.6■□□□□ 0.73
SNCB-202ENST00000393693 DNAJC17Q9NVM6 304 aaKnown RBP19.6■□□□□ 0.73
SNCB-202ENST00000393693 OSER1Q9NX31 292 aa19.6■□□□□ 0.73
SNCB-202ENST00000393693 FRMD4BQ9Y2L6 1034 aa19.6■□□□□ 0.73
SNCB-202ENST00000393693 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.6■□□□□ 0.73
SNCB-202ENST00000393693 ITIH6Q6UXX5 1313 aa19.59■□□□□ 0.73
SNCB-202ENST00000393693 A0A1W2PQC6 194 aa19.59■□□□□ 0.73
SNCB-202ENST00000393693 NEDD8-MDP1E9PL57 170 aa19.59■□□□□ 0.73
SNCB-202ENST00000393693 NTSR1P30989 418 aa19.59■□□□□ 0.73
SNCB-202ENST00000393693 PSMC2P35998 433 aaKnown RBP19.59■□□□□ 0.73
SNCB-202ENST00000393693 TRIM14Q14142 442 aa19.59■□□□□ 0.73
SNCB-202ENST00000393693 GRAMD4Q6IC98 578 aa19.59■□□□□ 0.73
SNCB-202ENST00000393693 TPGS1Q6ZTW0 290 aa19.59■□□□□ 0.73
SNCB-202ENST00000393693 HTR3DQ70Z44 454 aa19.59■□□□□ 0.73
SNCB-202ENST00000393693 GPRIN1Q7Z2K8 1008 aa19.59■□□□□ 0.73
SNCB-202ENST00000393693 TRMT11Q7Z4G4 463 aaKnown RBP19.59■□□□□ 0.73
SNCB-202ENST00000393693 CCDC150Q8NCX0 1101 aa19.59■□□□□ 0.73
SNCB-202ENST00000393693 KCNV2Q8TDN2 545 aa19.59■□□□□ 0.73
SNCB-202ENST00000393693 TMEM174Q8WUU8 243 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms