RNA–Protein interactions for RNA: ENST00000393655.3

TFAP2B-202, Transcript of transcription factor AP-2 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFAP2B, Length 5,773 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2B-202ENST00000393655 TSPAN3O60637 253 aa16.6■□□□□ 0.25
TFAP2B-202ENST00000393655 TPBGLP0DKB5 382 aa16.6■□□□□ 0.25
TFAP2B-202ENST00000393655 PWP1Q13610 501 aa16.6■□□□□ 0.25
TFAP2B-202ENST00000393655 RAD9BQ6WBX8 426 aa16.6■□□□□ 0.25
TFAP2B-202ENST00000393655 B3GALNT2Q8NCR0 500 aa16.6■□□□□ 0.25
TFAP2B-202ENST00000393655 HPS5Q9UPZ3 1129 aa16.6■□□□□ 0.25
TFAP2B-202ENST00000393655 ANKRD65E5RJM6 399 aa16.6■□□□□ 0.25
TFAP2B-202ENST00000393655 CASP4P49662 377 aa16.6■□□□□ 0.25
TFAP2B-202ENST00000393655 MRPS15P82914 257 aaKnown RBP16.6■□□□□ 0.25
TFAP2B-202ENST00000393655 CCDC149Q6ZUS6 474 aa16.6■□□□□ 0.25
TFAP2B-202ENST00000393655 NT5DC3Q86UY8 548 aa16.6■□□□□ 0.25
TFAP2B-202ENST00000393655 SYTL1Q8IYJ3 562 aa16.6■□□□□ 0.25
TFAP2B-202ENST00000393655 TMEM199Q8N511 208 aa16.6■□□□□ 0.25
TFAP2B-202ENST00000393655 LZTR1Q8N653 840 aa16.6■□□□□ 0.25
TFAP2B-202ENST00000393655 OR2W6PQ8NHA6 318 aa16.6■□□□□ 0.25
TFAP2B-202ENST00000393655 PPP1R14AQ96A00 147 aa16.6■□□□□ 0.25
TFAP2B-202ENST00000393655 CCT8L2Q96SF2 557 aa16.6■□□□□ 0.25
TFAP2B-202ENST00000393655 ASB7Q9H672 318 aa16.6■□□□□ 0.25
TFAP2B-202ENST00000393655 NFKBIL1Q9UBC1 381 aaPredicted RBP16.6■□□□□ 0.25
TFAP2B-202ENST00000393655 PHF20L1A8MW92 1017 aa16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 POLR2EP19388 210 aaKnown RBP16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 IGFBP4P22692 258 aa16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 CCZ1BP86790 482 aa16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 CCZ1P86791 482 aaPredicted RBP16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 E2F4Q16254 413 aa16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 MCOLN3Q8TDD5 553 aa16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 FAM111AQ96PZ2 611 aa16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 PPP1R10Q96QC0 940 aaKnown RBP16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 DNAJC5Q9H3Z4 198 aa16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 RBM22Q9NW64 420 aaKnown RBP eCLIP16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 SALL1Q9NSC2 1324 aa16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 VIL1P09327 827 aaKnown RBP16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 OR1E1P30953 314 aa16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 MAD2L1Q13257 205 aaPredicted RBP16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 LRRC36Q1X8D7 754 aa16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 ANKRD49Q8WVL7 239 aa16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 APBB2Q92870 758 aa16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 ZNF7P17097 686 aaPredicted RBP16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 CHRNB3Q05901 458 aa16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 RIN3Q8TB24 985 aa16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 ACTR8Q9H981 624 aa16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 SLC9A3R1O14745 358 aaPredicted RBP16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 PROSCO94903 275 aa16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 KRT6AP02538 564 aa16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 KRT6BP04259 564 aa16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 MPOP05164 745 aa16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 ATP5BP06576 529 aaKnown RBP16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 KRT6CP48668 564 aa16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 MAPK7Q13164 816 aa16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 NFYCQ13952 458 aa16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 ATP6AP1LQ52LC2 224 aa16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 TRPM8Q7Z2W7 1104 aa16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 CYP4Z2PQ8N1L4 340 aa16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 SH2D3CQ8N5H7 860 aa16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 GLIS2Q9BZE0 524 aaPredicted RBP16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 RPRD1BQ9NQG5 326 aaKnown RBP16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 STK39Q9UEW8 545 aa16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 ACOT9Q9Y305 439 aa16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 NFASCO94856 1347 aa16.59■□□□□ 0.25
TFAP2B-202ENST00000393655 TMEM114B3SHH9 223 aa16.58■□□□□ 0.25
TFAP2B-202ENST00000393655 PKN2Q16513 984 aaKnown RBP16.58■□□□□ 0.25
TFAP2B-202ENST00000393655 PABPC1LQ4VXU2 614 aaKnown RBP16.58■□□□□ 0.25
TFAP2B-202ENST00000393655 LRRC8DQ7L1W4 858 aa16.58■□□□□ 0.25
TFAP2B-202ENST00000393655 COLGALT1Q8NBJ5 622 aa16.58■□□□□ 0.25
TFAP2B-202ENST00000393655 MED8Q96G25 268 aa16.58■□□□□ 0.25
TFAP2B-202ENST00000393655 SEC16BQ96JE7 1060 aa16.58■□□□□ 0.25
TFAP2B-202ENST00000393655 SHCBP1LQ9BZQ2 653 aa16.58■□□□□ 0.25
TFAP2B-202ENST00000393655 NDOR1Q9UHB4 597 aa16.58■□□□□ 0.25
TFAP2B-202ENST00000393655 MYPNQ86TC9 1320 aa16.58■□□□□ 0.25
TFAP2B-202ENST00000393655 LOC100653049A0A140TA62 436 aa16.58■□□□□ 0.25
TFAP2B-202ENST00000393655 KRT34O76011 436 aa16.58■□□□□ 0.25
TFAP2B-202ENST00000393655 POLR2LP62875 67 aaKnown RBP16.58■□□□□ 0.25
TFAP2B-202ENST00000393655 YWHAZP63104 245 aaKnown RBP16.58■□□□□ 0.25
TFAP2B-202ENST00000393655 ATAD3BQ5T9A4 648 aa16.58■□□□□ 0.25
TFAP2B-202ENST00000393655 ARID3BQ8IVW6 561 aaPredicted RBP16.58■□□□□ 0.25
TFAP2B-202ENST00000393655 UROC1Q96N76 676 aa16.58■□□□□ 0.25
TFAP2B-202ENST00000393655 IRX2Q9BZI1 471 aaPredicted RBP16.58■□□□□ 0.25
TFAP2B-202ENST00000393655 VANGL2Q9ULK5 521 aa16.58■□□□□ 0.25
TFAP2B-202ENST00000393655 A0A088AWK7 358 aa16.58■□□□□ 0.24
TFAP2B-202ENST00000393655 EIF3HO15372 352 aaKnown RBP eCLIP16.58■□□□□ 0.24
TFAP2B-202ENST00000393655 NDUFS2O75306 463 aa16.58■□□□□ 0.24
TFAP2B-202ENST00000393655 ZNF10P21506 573 aaPredicted RBP16.58■□□□□ 0.24
TFAP2B-202ENST00000393655 ERVK-9P63128 1117 aa16.58■□□□□ 0.24
TFAP2B-202ENST00000393655 ERVK-24P63145 666 aa16.58■□□□□ 0.24
TFAP2B-202ENST00000393655 CBWD3Q5JTY5 395 aa16.58■□□□□ 0.24
TFAP2B-202ENST00000393655 CBWD5Q5RIA9 395 aa16.58■□□□□ 0.24
TFAP2B-202ENST00000393655 FGD2Q7Z6J4 655 aa16.58■□□□□ 0.24
TFAP2B-202ENST00000393655 TIMM13Q9Y5L4 95 aaPredicted RBP16.58■□□□□ 0.24
TFAP2B-202ENST00000393655 RAD51BO15315 384 aa16.58■□□□□ 0.24
TFAP2B-202ENST00000393655 SLC29A2Q14542 456 aa16.58■□□□□ 0.24
TFAP2B-202ENST00000393655 PRKD2Q9BZL6 878 aa16.58■□□□□ 0.24
TFAP2B-202ENST00000393655 EFCAB1Q9HAE3 211 aa16.58■□□□□ 0.24
TFAP2B-202ENST00000393655 RGS18Q9NS28 235 aa16.58■□□□□ 0.24
TFAP2B-202ENST00000393655 POLG2Q9UHN1 485 aa16.58■□□□□ 0.24
TFAP2B-202ENST00000393655 AKAP5P24588 427 aa16.58■□□□□ 0.24
TFAP2B-202ENST00000393655 FKBP1AP62942 108 aaKnown RBP16.58■□□□□ 0.24
TFAP2B-202ENST00000393655 SEL1L3Q68CR1 1132 aa16.58■□□□□ 0.24
TFAP2B-202ENST00000393655 CLYBLQ8N0X4 340 aa16.58■□□□□ 0.24
TFAP2B-202ENST00000393655 TMEM86AQ8N2M4 240 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms