RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 DNM1LO00429 736 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 CLDN5O00501 218 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 ZNF623O75123 536 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 FAM155BO75949 473 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 BEST1O76090 585 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 ZWINTO95229 277 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 GSTA1P08263 222 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 FAM200BP0CF97 657 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 RARBP10826 455 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 FOXN2P32314 431 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 MLH1P40692 756 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 MAGEA3P43357 314 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 TM4SF4P48230 202 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 SULT1E1P49888 294 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 AIF1P55008 147 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 SLC20A2Q08357 652 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 MTFR1Q15390 333 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 DCAF6Q58WW2 860 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 OTUD1Q5VV17 481 aaPredicted RBP14.82□□□□□ -0.04
MKS1-203ENST00000393120 KIAA0319Q5VV43 1072 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 NCBP2-AS2Q69YL0 99 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 KCNT2Q6UVM3 1135 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 CAND1Q86VP6 1230 aaKnown RBP14.82□□□□□ -0.04
MKS1-203ENST00000393120 VPS52Q8N1B4 723 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 SLC44A1Q8WWI5 657 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 GAD1Q99259 594 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 POPDC2Q9HBU9 364 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 DDX43Q9NXZ2 648 aaKnown RBP14.82□□□□□ -0.04
MKS1-203ENST00000393120 DTLQ9NZJ0 730 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 PRKAG3Q9UGI9 489 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 PTCH2Q9Y6C5 1203 aa14.82□□□□□ -0.04
MKS1-203ENST00000393120 TRPM7Q96QT4 1865 aa14.81□□□□□ -0.04
MKS1-203ENST00000393120 MEIS3P2A8K0S8 358 aa14.81□□□□□ -0.04
MKS1-203ENST00000393120 C9IYK1 514 aa14.81□□□□□ -0.04
MKS1-203ENST00000393120 CA12O43570 354 aa14.81□□□□□ -0.04
MKS1-203ENST00000393120 SPAG7O75391 227 aa14.81□□□□□ -0.04
MKS1-203ENST00000393120 ZNF189O75820 626 aaPredicted RBP14.81□□□□□ -0.04
MKS1-203ENST00000393120 PAX3P23760 479 aa14.81□□□□□ -0.04
MKS1-203ENST00000393120 ACAT1P24752 427 aaKnown RBP14.81□□□□□ -0.04
MKS1-203ENST00000393120 FCGRTP55899 365 aa14.81□□□□□ -0.04
MKS1-203ENST00000393120 EFTUD2Q15029 972 aaKnown RBP eCLIP14.81□□□□□ -0.042e-7■■□□□ 14.1
MKS1-203ENST00000393120 PDK4Q16654 411 aa14.81□□□□□ -0.04
MKS1-203ENST00000393120 MDH1BQ5I0G3 518 aa14.81□□□□□ -0.04
MKS1-203ENST00000393120 TRPM8Q7Z2W7 1104 aa14.81□□□□□ -0.04
MKS1-203ENST00000393120 SPATA21Q7Z572 469 aa14.81□□□□□ -0.04
MKS1-203ENST00000393120 SIX6OS1Q8N1H7 587 aa14.81□□□□□ -0.04
MKS1-203ENST00000393120 CCDC110Q8TBZ0 833 aa14.81□□□□□ -0.04
MKS1-203ENST00000393120 WNT8BQ93098 351 aa14.81□□□□□ -0.04
MKS1-203ENST00000393120 FAM149B1Q96BN6 582 aa14.81□□□□□ -0.04
MKS1-203ENST00000393120 KIF9Q9HAQ2 790 aa14.81□□□□□ -0.04
MKS1-203ENST00000393120 CDH9Q9ULB4 789 aa14.81□□□□□ -0.04
MKS1-203ENST00000393120 ARL2BPQ9Y2Y0 163 aa14.81□□□□□ -0.04
MKS1-203ENST00000393120 ARL5CA6NH57 179 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 KBTBD13C9JR72 458 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 H3BRJ5 948 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 SEPT4O43236 478 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 GOT1P17174 413 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 KRT4P19013 534 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 CA4P22748 312 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 AMPD1P23109 780 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 GBP2P32456 591 aaPredicted RBP14.8□□□□□ -0.04
MKS1-203ENST00000393120 RPA3P35244 121 aaPredicted RBP14.8□□□□□ -0.04
MKS1-203ENST00000393120 SCTRP47872 440 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 TKTL1P51854 596 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 CDK16Q00536 496 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 SEMA5AQ13591 1074 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 TTC31Q49AM3 519 aaPredicted RBP14.8□□□□□ -0.04
MKS1-203ENST00000393120 RAB41Q5JT25 222 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 AGMOQ6ZNB7 445 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 FAM131BQ86XD5 332 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 C4orf33Q8N1A6 199 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 AGGF1Q8N302 714 aaeCLIP14.8□□□□□ -0.04
MKS1-203ENST00000393120 TFB1MQ8WVM0 346 aaKnown RBP14.8□□□□□ -0.04
MKS1-203ENST00000393120 TRIB2Q92519 343 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 SYT15Q9BQS2 421 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 MED10Q9BTT4 135 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 MAGEB5Q9BZ81 275 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 CNGB3Q9NQW8 809 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 MIOSQ9NXC5 875 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 SCN10AQ9Y5Y9 1956 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 IQANK1A0A1B0GTG1 560 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 TM9SF1O15321 606 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 AVILO75366 819 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 METTL18O95568 372 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 PGK1P00558 417 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 C1QAP02745 245 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 APRTP07741 180 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 IGFBP6P24592 240 aaPredicted RBP14.8□□□□□ -0.04
MKS1-203ENST00000393120 PRKCHP24723 683 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 NDUFV1P49821 464 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 RAB27AP51159 221 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 CLCNKBP51801 687 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 HEATR6Q6AI08 1181 aaKnown RBP14.8□□□□□ -0.04
MKS1-203ENST00000393120 CNPY4Q8N129 248 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 BANPQ8N9N5 519 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 NDRG1Q92597 394 aaKnown RBP14.8□□□□□ -0.04
MKS1-203ENST00000393120 NTAN1Q96AB6 310 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 PGAP3Q96FM1 320 aaPredicted RBP14.8□□□□□ -0.04
MKS1-203ENST00000393120 SMOQ99835 787 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 XAB2Q9HCS7 855 aaKnown RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms