RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 MRPL42Q9Y6G3 142 aaKnown RBP12.53□□□□□ -0.4
CAPRIN1-202ENST00000389645 TRIP11Q15643 1979 aa12.53□□□□□ -0.4
CAPRIN1-202ENST00000389645 PPEF2O14830 753 aa12.53□□□□□ -0.4
CAPRIN1-202ENST00000389645 CREB3O43889 395 aa12.53□□□□□ -0.4
CAPRIN1-202ENST00000389645 PURAQ00577 322 aaKnown RBP12.53□□□□□ -0.4
CAPRIN1-202ENST00000389645 ZNF268Q14587 947 aaPredicted RBP12.53□□□□□ -0.4
CAPRIN1-202ENST00000389645 PDK4Q16654 411 aa12.53□□□□□ -0.4
CAPRIN1-202ENST00000389645 TBC1D25Q3MII6 688 aa12.53□□□□□ -0.4
CAPRIN1-202ENST00000389645 FAM47CQ5HY64 1035 aa12.53□□□□□ -0.4
CAPRIN1-202ENST00000389645 FAM131BQ86XD5 332 aa12.53□□□□□ -0.4
CAPRIN1-202ENST00000389645 NDRG1Q92597 394 aaKnown RBP12.53□□□□□ -0.4
CAPRIN1-202ENST00000389645 ZMAT2Q96NC0 199 aaKnown RBP12.53□□□□□ -0.4
CAPRIN1-202ENST00000389645 FBXO6Q9NRD1 293 aaPredicted RBP12.53□□□□□ -0.4
CAPRIN1-202ENST00000389645 SLC24A2Q9UI40 661 aa12.53□□□□□ -0.4
CAPRIN1-202ENST00000389645 BARX2Q9UMQ3 279 aaPredicted RBP12.53□□□□□ -0.4
CAPRIN1-202ENST00000389645 PCDHGC3Q9UN70 934 aa12.53□□□□□ -0.4
CAPRIN1-202ENST00000389645 CNTN6Q9UQ52 1028 aa12.53□□□□□ -0.4
CAPRIN1-202ENST00000389645 LAMA2P24043 3122 aaKnown RBP12.53□□□□□ -0.4
CAPRIN1-202ENST00000389645 CILPO75339 1184 aa12.53□□□□□ -0.4
CAPRIN1-202ENST00000389645 UNC5CO95185 931 aa12.53□□□□□ -0.4
CAPRIN1-202ENST00000389645 PCK1P35558 622 aa12.53□□□□□ -0.4
CAPRIN1-202ENST00000389645 CA9Q16790 459 aa12.53□□□□□ -0.4
CAPRIN1-202ENST00000389645 PMF1Q6P1K2 205 aa12.53□□□□□ -0.4
CAPRIN1-202ENST00000389645 RFWD2Q8NHY2 731 aa12.53□□□□□ -0.4
CAPRIN1-202ENST00000389645 RNF39Q9H2S5 420 aa12.53□□□□□ -0.4
CAPRIN1-202ENST00000389645 PIN4Q9Y237 131 aaKnown RBP12.53□□□□□ -0.4
CAPRIN1-202ENST00000389645 CCDC78A2IDD5 438 aa12.52□□□□□ -0.4
CAPRIN1-202ENST00000389645 TTC36A6NLP5 189 aa12.52□□□□□ -0.4
CAPRIN1-202ENST00000389645 EDF1O60869 148 aaKnown RBP12.52□□□□□ -0.4
CAPRIN1-202ENST00000389645 AKR1A1P14550 325 aa12.52□□□□□ -0.4
CAPRIN1-202ENST00000389645 GPD2P43304 727 aa12.52□□□□□ -0.4
CAPRIN1-202ENST00000389645 SCNN1BP51168 640 aa12.52□□□□□ -0.4
CAPRIN1-202ENST00000389645 POLNQ7Z5Q5 900 aa12.52□□□□□ -0.4
CAPRIN1-202ENST00000389645 C18orf25Q96B23 403 aaPredicted RBP12.52□□□□□ -0.4
CAPRIN1-202ENST00000389645 AGAP3Q96P47 875 aa12.52□□□□□ -0.4
CAPRIN1-202ENST00000389645 NUDCD1Q96RS6 583 aa12.52□□□□□ -0.4
CAPRIN1-202ENST00000389645 MRPL45Q9BRJ2 306 aaKnown RBP12.52□□□□□ -0.4
CAPRIN1-202ENST00000389645 TXNDC16Q9P2K2 825 aa12.52□□□□□ -0.4
CAPRIN1-202ENST00000389645 PPARGC1AQ9UBK2 798 aaKnown RBP12.52□□□□□ -0.4
CAPRIN1-202ENST00000389645 MBLAC1A4D2B0 266 aaPredicted RBP12.52□□□□□ -0.41
CAPRIN1-202ENST00000389645 CCDC130P13994 396 aa12.52□□□□□ -0.41
CAPRIN1-202ENST00000389645 SAT1P21673 171 aa12.52□□□□□ -0.41
CAPRIN1-202ENST00000389645 RASSF2P50749 326 aa12.52□□□□□ -0.41
CAPRIN1-202ENST00000389645 NME3Q13232 169 aa12.52□□□□□ -0.41
CAPRIN1-202ENST00000389645 PRPF39Q86UA1 669 aaKnown RBP12.52□□□□□ -0.41
CAPRIN1-202ENST00000389645 ZNF410Q86VK4 478 aa12.52□□□□□ -0.41
CAPRIN1-202ENST00000389645 DTX3LQ8TDB6 740 aa12.52□□□□□ -0.41
CAPRIN1-202ENST00000389645 CLEC4CQ8WTT0 213 aa12.52□□□□□ -0.41
CAPRIN1-202ENST00000389645 ACSS3Q9H6R3 686 aa12.52□□□□□ -0.41
CAPRIN1-202ENST00000389645 RNF186Q9NXI6 227 aa12.52□□□□□ -0.41
CAPRIN1-202ENST00000389645 ACTL7BQ9Y614 415 aa12.52□□□□□ -0.41
CAPRIN1-202ENST00000389645 HAS3O00219 553 aa12.52□□□□□ -0.41
CAPRIN1-202ENST00000389645 TCEA3O75764 348 aa12.52□□□□□ -0.41
CAPRIN1-202ENST00000389645 KRT37O76014 449 aa12.52□□□□□ -0.41
CAPRIN1-202ENST00000389645 HAUS5O94927 633 aa12.52□□□□□ -0.41
CAPRIN1-202ENST00000389645 ZWINTO95229 277 aa12.52□□□□□ -0.41
CAPRIN1-202ENST00000389645 CTSHP09668 335 aa12.52□□□□□ -0.41
CAPRIN1-202ENST00000389645 DARSP14868 501 aaKnown RBP12.52□□□□□ -0.41
CAPRIN1-202ENST00000389645 ZNF143P52747 638 aaPredicted RBP12.52□□□□□ -0.41
CAPRIN1-202ENST00000389645 FCGRTP55899 365 aa12.52□□□□□ -0.41
CAPRIN1-202ENST00000389645 ADAM17P78536 824 aa12.52□□□□□ -0.41
CAPRIN1-202ENST00000389645 ZCCHC23Q6ZST2 131 aa12.52□□□□□ -0.41
CAPRIN1-202ENST00000389645 NAT8LQ8N9F0 302 aa12.52□□□□□ -0.41
CAPRIN1-202ENST00000389645 DEPDC1BQ8WUY9 529 aa12.52□□□□□ -0.41
CAPRIN1-202ENST00000389645 SMIM35A0A1B0GVV1 85 aa12.51□□□□□ -0.41
CAPRIN1-202ENST00000389645 C17orf102A2RUQ5 167 aa12.51□□□□□ -0.41
CAPRIN1-202ENST00000389645 NDC80O14777 642 aa12.51□□□□□ -0.41
CAPRIN1-202ENST00000389645 UGT1A9O60656 530 aa12.51□□□□□ -0.41
CAPRIN1-202ENST00000389645 SERPINB3P29508 390 aa12.51□□□□□ -0.41
CAPRIN1-202ENST00000389645 STIP1P31948 543 aaKnown RBP12.51□□□□□ -0.41
CAPRIN1-202ENST00000389645 AP1B1Q10567 949 aa12.51□□□□□ -0.41
CAPRIN1-202ENST00000389645 IFRD2Q12894 506 aaPredicted RBP12.51□□□□□ -0.41
CAPRIN1-202ENST00000389645 SNX17Q15036 470 aa12.51□□□□□ -0.41
CAPRIN1-202ENST00000389645 TAF11Q15544 211 aa12.51□□□□□ -0.41
CAPRIN1-202ENST00000389645 ARID3BQ8IVW6 561 aaPredicted RBP12.51□□□□□ -0.41
CAPRIN1-202ENST00000389645 UBR7Q8N806 425 aa12.51□□□□□ -0.41
CAPRIN1-202ENST00000389645 CXorf38Q8TB03 319 aa12.51□□□□□ -0.41
CAPRIN1-202ENST00000389645 SNRNP25Q9BV90 132 aaKnown RBP12.51□□□□□ -0.41
CAPRIN1-202ENST00000389645 UGT1A7Q9HAW7 530 aa12.51□□□□□ -0.41
CAPRIN1-202ENST00000389645 UGT1A10Q9HAW8 530 aa12.51□□□□□ -0.41
CAPRIN1-202ENST00000389645 UGT1A8Q9HAW9 530 aa12.51□□□□□ -0.41
CAPRIN1-202ENST00000389645 IL1RAPL1Q9NZN1 696 aa12.51□□□□□ -0.41
CAPRIN1-202ENST00000389645 GYG2O15488 501 aa12.51□□□□□ -0.41
CAPRIN1-202ENST00000389645 ENTPD5O75356 428 aa12.51□□□□□ -0.41
CAPRIN1-202ENST00000389645 TRPA1O75762 1119 aa12.51□□□□□ -0.41
CAPRIN1-202ENST00000389645 ESRRAP11474 423 aaPredicted RBP12.51□□□□□ -0.41
CAPRIN1-202ENST00000389645 TFE3P19532 575 aaPredicted RBP12.51□□□□□ -0.41
CAPRIN1-202ENST00000389645 CCND3P30281 292 aaPredicted RBP12.51□□□□□ -0.41
CAPRIN1-202ENST00000389645 GBE1Q04446 702 aa12.51□□□□□ -0.41
CAPRIN1-202ENST00000389645 CACNB2Q08289 660 aaPredicted RBP12.51□□□□□ -0.41
CAPRIN1-202ENST00000389645 PPP1R15BQ5SWA1 713 aa12.51□□□□□ -0.41
CAPRIN1-202ENST00000389645 LGSNQ5TDP6 509 aa12.51□□□□□ -0.41
CAPRIN1-202ENST00000389645 HEATR6Q6AI08 1181 aaKnown RBP12.51□□□□□ -0.41
CAPRIN1-202ENST00000389645 DRICH1Q6PGQ1 229 aaPredicted RBP12.51□□□□□ -0.41
CAPRIN1-202ENST00000389645 CES3Q6UWW8 571 aa12.51□□□□□ -0.41
CAPRIN1-202ENST00000389645 DENND5BQ6ZUT9 1274 aa12.51□□□□□ -0.41
CAPRIN1-202ENST00000389645 ARL10Q8N8L6 244 aa12.51□□□□□ -0.41
CAPRIN1-202ENST00000389645 PTPRN2Q92932 1015 aa12.51□□□□□ -0.41
CAPRIN1-202ENST00000389645 WNT8BQ93098 351 aa12.51□□□□□ -0.41
CAPRIN1-202ENST00000389645 SERAC1Q96JX3 654 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms