RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 OR6P1Q8NGX9 317 aa14.69□□□□□ -0.06
RTF1-201ENST00000389629 LRRN4Q8WUT4 740 aa14.69□□□□□ -0.06
RTF1-201ENST00000389629 SEC14L1Q92503 715 aa14.69□□□□□ -0.06
RTF1-201ENST00000389629 VPS50Q96JG6 964 aa14.69□□□□□ -0.06
RTF1-201ENST00000389629 DOLKQ9UPQ8 538 aa14.69□□□□□ -0.06
RTF1-201ENST00000389629 AK5Q9Y6K8 562 aa14.69□□□□□ -0.06
RTF1-201ENST00000389629 A0A0B4J269 797 aa14.68□□□□□ -0.06
RTF1-201ENST00000389629 TM7SF2O76062 418 aa14.68□□□□□ -0.06
RTF1-201ENST00000389629 ITGB3P05106 788 aa14.68□□□□□ -0.06
RTF1-201ENST00000389629 TDRD10Q5VZ19 366 aaKnown RBP14.68□□□□□ -0.06
RTF1-201ENST00000389629 RXFP2Q8WXD0 754 aa14.68□□□□□ -0.06
RTF1-201ENST00000389629 WNK4Q96J92 1243 aa14.68□□□□□ -0.06
RTF1-201ENST00000389629 CEP41Q9BYV8 373 aa14.68□□□□□ -0.06
RTF1-201ENST00000389629 VPS33BQ9H267 617 aa14.68□□□□□ -0.06
RTF1-201ENST00000389629 S100A14Q9HCY8 104 aa14.68□□□□□ -0.06
RTF1-201ENST00000389629 CSADQ9Y600 493 aa14.68□□□□□ -0.06
RTF1-201ENST00000389629 KDELR1P24390 212 aa14.68□□□□□ -0.06
RTF1-201ENST00000389629 TNFAIP2Q03169 654 aa14.68□□□□□ -0.06
RTF1-201ENST00000389629 SPIRE1Q08AE8 756 aa14.68□□□□□ -0.06
RTF1-201ENST00000389629 CDC16Q13042 620 aa14.68□□□□□ -0.06
RTF1-201ENST00000389629 PGM5Q15124 567 aa14.68□□□□□ -0.06
RTF1-201ENST00000389629 GIPC3Q8TF64 312 aa14.68□□□□□ -0.06
RTF1-201ENST00000389629 GIPC2Q8TF65 315 aa14.68□□□□□ -0.06
RTF1-201ENST00000389629 FSD1LQ9BXM9 530 aa14.68□□□□□ -0.06
RTF1-201ENST00000389629 RMI1Q9H9A7 625 aa14.68□□□□□ -0.06
RTF1-201ENST00000389629 CHEK2O96017 543 aa14.68□□□□□ -0.06
RTF1-201ENST00000389629 ME2P23368 584 aa14.68□□□□□ -0.06
RTF1-201ENST00000389629 MIPP30301 263 aa14.68□□□□□ -0.06
RTF1-201ENST00000389629 ATP8B3O60423 1300 aa14.68□□□□□ -0.06
RTF1-201ENST00000389629 MAFGO15525 162 aa14.68□□□□□ -0.06
RTF1-201ENST00000389629 FAM155BO75949 473 aa14.68□□□□□ -0.06
RTF1-201ENST00000389629 ITGAVP06756 1048 aa14.68□□□□□ -0.06
RTF1-201ENST00000389629 SERPINB1P30740 379 aa14.68□□□□□ -0.06
RTF1-201ENST00000389629 CAP2P40123 477 aa14.68□□□□□ -0.06
RTF1-201ENST00000389629 ABCG1P45844 678 aa14.68□□□□□ -0.06
RTF1-201ENST00000389629 POU5F1Q01860 360 aaKnown RBP14.68□□□□□ -0.06
RTF1-201ENST00000389629 UGCGQ16739 394 aa14.68□□□□□ -0.06
RTF1-201ENST00000389629 SPDYAQ5MJ70 313 aa14.68□□□□□ -0.06
RTF1-201ENST00000389629 ATF7IP2Q5U623 682 aa14.68□□□□□ -0.06
RTF1-201ENST00000389629 GPRASP2Q96D09 838 aa14.68□□□□□ -0.06
RTF1-201ENST00000389629 MTA2O94776 668 aa14.67□□□□□ -0.06
RTF1-201ENST00000389629 NSUN2Q08J23 767 aaKnown RBP eCLIP14.67□□□□□ -0.06
RTF1-201ENST00000389629 STX5Q13190 355 aa14.67□□□□□ -0.06
RTF1-201ENST00000389629 USP33Q8TEY7 942 aa14.67□□□□□ -0.06
RTF1-201ENST00000389629 PHF12Q96QT6 1004 aa14.67□□□□□ -0.06
RTF1-201ENST00000389629 FAM49AQ9H0Q0 323 aaPredicted RBP14.67□□□□□ -0.06
RTF1-201ENST00000389629 SNED1Q8TER0 1413 aa14.67□□□□□ -0.06
RTF1-201ENST00000389629 TCRBV9S1A1TA0A576 114 aa14.67□□□□□ -0.06
RTF1-201ENST00000389629 OGTO15294 1046 aa14.67□□□□□ -0.06
RTF1-201ENST00000389629 NAMPTP43490 491 aa14.67□□□□□ -0.06
RTF1-201ENST00000389629 NR1H2P55055 460 aa14.67□□□□□ -0.06
RTF1-201ENST00000389629 DMPKQ09013 629 aa14.67□□□□□ -0.06
RTF1-201ENST00000389629 RTKN2Q8IZC4 609 aa14.67□□□□□ -0.06
RTF1-201ENST00000389629 ARL10Q8N8L6 244 aa14.67□□□□□ -0.06
RTF1-201ENST00000389629 PCYOX1LQ8NBM8 494 aa14.67□□□□□ -0.06
RTF1-201ENST00000389629 APOL2Q9BQE5 337 aa14.67□□□□□ -0.06
RTF1-201ENST00000389629 RNPEPQ9H4A4 650 aa14.67□□□□□ -0.06
RTF1-201ENST00000389629 APOC4-APOC2K7ER74 178 aa14.67□□□□□ -0.06
RTF1-201ENST00000389629 CYB561D2O14569 222 aa14.67□□□□□ -0.06
RTF1-201ENST00000389629 APOC2P02655 101 aa14.67□□□□□ -0.06
RTF1-201ENST00000389629 KRT8P05787 483 aa14.67□□□□□ -0.06
RTF1-201ENST00000389629 AQP4P55087 323 aa14.67□□□□□ -0.06
RTF1-201ENST00000389629 CDH8P55286 799 aa14.67□□□□□ -0.06
RTF1-201ENST00000389629 PEX6Q13608 980 aa14.67□□□□□ -0.06
RTF1-201ENST00000389629 PCDH20Q8N6Y1 951 aaKnown RBP14.67□□□□□ -0.06
RTF1-201ENST00000389629 MARK4Q96L34 752 aa14.67□□□□□ -0.06
RTF1-201ENST00000389629 DACH2Q96NX9 599 aa14.67□□□□□ -0.06
RTF1-201ENST00000389629 PXMP2Q9NR77 195 aa14.67□□□□□ -0.06
RTF1-201ENST00000389629 XPOTO43592 962 aaKnown RBP14.67□□□□□ -0.06
RTF1-201ENST00000389629 ALBP02768 609 aa14.67□□□□□ -0.06
RTF1-201ENST00000389629 TRAF2Q12933 501 aa14.67□□□□□ -0.06
RTF1-201ENST00000389629 ITGADQ13349 1161 aa14.67□□□□□ -0.06
RTF1-201ENST00000389629 EFHC2Q5JST6 749 aa14.67□□□□□ -0.06
RTF1-201ENST00000389629 UNC45BQ8IWX7 931 aa14.67□□□□□ -0.06
RTF1-201ENST00000389629 FAM172AQ8WUF8 416 aa14.67□□□□□ -0.06
RTF1-201ENST00000389629 PTPRN2Q92932 1015 aa14.67□□□□□ -0.06
RTF1-201ENST00000389629 IDI2Q9BXS1 227 aa14.67□□□□□ -0.06
RTF1-201ENST00000389629 CYP4F12Q9HCS2 524 aa14.67□□□□□ -0.06
RTF1-201ENST00000389629 DAPK2Q9UIK4 370 aa14.67□□□□□ -0.06
RTF1-201ENST00000389629 IGLV3-22A0A075B6J6 115 aa14.66□□□□□ -0.06
RTF1-201ENST00000389629 ZNF23P17027 643 aa14.66□□□□□ -0.06
RTF1-201ENST00000389629 DGKDQ16760 1214 aa14.66□□□□□ -0.06
RTF1-201ENST00000389629 GOLGA7BQ2TAP0 167 aa14.66□□□□□ -0.06
RTF1-201ENST00000389629 LENG9Q96B70 501 aa14.66□□□□□ -0.06
RTF1-201ENST00000389629 CNPY3Q9BT09 278 aa14.66□□□□□ -0.06
RTF1-201ENST00000389629 NT5C1AQ9BXI3 368 aa14.66□□□□□ -0.06
RTF1-201ENST00000389629 QTRT2Q9H974 415 aaKnown RBP14.66□□□□□ -0.06
RTF1-201ENST00000389629 HOXC10Q9NYD6 342 aa14.66□□□□□ -0.06
RTF1-201ENST00000389629 SEPT3Q9UH03 358 aa14.66□□□□□ -0.06
RTF1-201ENST00000389629 IGKV6D-41A0A0C4DH26 115 aa14.66□□□□□ -0.06
RTF1-201ENST00000389629 SDR42E2A6NKP2 422 aa14.66□□□□□ -0.06
RTF1-201ENST00000389629 PDGFRBP09619 1106 aa14.66□□□□□ -0.06
RTF1-201ENST00000389629 RBL1P28749 1068 aa14.66□□□□□ -0.06
RTF1-201ENST00000389629 CA8P35219 290 aa14.66□□□□□ -0.06
RTF1-201ENST00000389629 ABL2P42684 1182 aa14.66□□□□□ -0.06
RTF1-201ENST00000389629 STRA8Q7Z7C7 330 aa14.66□□□□□ -0.06
RTF1-201ENST00000389629 ELMO2Q96JJ3 720 aa14.66□□□□□ -0.06
RTF1-201ENST00000389629 ADAM7Q9H2U9 754 aa14.66□□□□□ -0.06
RTF1-201ENST00000389629 TDRKHQ9Y2W6 561 aaKnown RBP14.66□□□□□ -0.06
RTF1-201ENST00000389629 ANGPTL3Q9Y5C1 460 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms