RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 PPP1R2P3Q6NXS1 205 aa10.55□□□□□ -0.72
LTN1-203ENST00000389195 SPNS2Q8IVW8 549 aa10.55□□□□□ -0.72
LTN1-203ENST00000389195 UNC5BQ8IZJ1 945 aa10.55□□□□□ -0.72
LTN1-203ENST00000389195 MAIP1Q8WWC4 291 aa10.55□□□□□ -0.72
LTN1-203ENST00000389195 PRCCQ92733 491 aaPredicted RBP10.55□□□□□ -0.72
LTN1-203ENST00000389195 C11orf84Q9BUA3 381 aaPredicted RBP10.55□□□□□ -0.72
LTN1-203ENST00000389195 CRISPLD1Q9H336 500 aa10.55□□□□□ -0.72
LTN1-203ENST00000389195 CCDC78A2IDD5 438 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 APOL1O14791 398 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 HGSO14964 777 aaPredicted RBP10.54□□□□□ -0.72
LTN1-203ENST00000389195 FKTNO75072 461 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 ZNF623O75123 536 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 USP12O75317 370 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 FAM155BO75949 473 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 ENDOD1O94919 500 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 SLC8A3P57103 927 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 AP1B1Q10567 949 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 STILQ15468 1287 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 FAM171A1Q5VUB5 890 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 GLB1LQ6UWU2 654 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.54□□□□□ -0.72
LTN1-203ENST00000389195 SLC24A5Q71RS6 500 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 LRRC8DQ7L1W4 858 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 HACE1Q8IYU2 909 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 GDAP1Q8TB36 358 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 NKD2Q969F2 451 aaPredicted RBP10.54□□□□□ -0.72
LTN1-203ENST00000389195 AGAP3Q96P47 875 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.54□□□□□ -0.72
LTN1-203ENST00000389195 OSER1Q9NX31 292 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 DTLQ9NZJ0 730 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 SLC17A6Q9P2U8 582 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 FEZ2Q9UHY8 353 aaPredicted RBP10.54□□□□□ -0.72
LTN1-203ENST00000389195 ARVCFO00192 962 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 ZBED1O96006 694 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 SETSIPP0DME0 302 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 CST5P28325 142 aaPredicted RBP10.54□□□□□ -0.72
LTN1-203ENST00000389195 LSP1P33241 339 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 GSCP56915 257 aaPredicted RBP10.54□□□□□ -0.72
LTN1-203ENST00000389195 DAOAP59103 153 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 GPX6P59796 221 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 COPS2P61201 443 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 YWHAHQ04917 246 aaPredicted RBP10.54□□□□□ -0.72
LTN1-203ENST00000389195 TAZQ16635 292 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 SLC25A52Q3SY17 297 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 BOLA3Q53S33 107 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 PRSS55Q6UWB4 352 aaPredicted RBP10.54□□□□□ -0.72
LTN1-203ENST00000389195 DENND5BQ6ZUT9 1274 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 BHLHA9Q7RTU4 235 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 EXOC3L1Q86VI1 746 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 TAX1BP1Q86VP1 789 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 SRRM1Q8IYB3 904 aaKnown RBP10.54□□□□□ -0.72
LTN1-203ENST00000389195 MPP5Q8N3R9 675 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 RNF34Q969K3 372 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 FAF2Q96CS3 445 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 FAXDC2Q96IV6 333 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 NMUR1Q9HB89 426 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 KCNK9Q9NPC2 374 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 UBP1Q9NZI7 540 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 LCMT1Q9UIC8 334 aa10.54□□□□□ -0.72
LTN1-203ENST00000389195 E7EVH7 732 aa10.53□□□□□ -0.72
LTN1-203ENST00000389195 ENPP3O14638 875 aa10.53□□□□□ -0.72
LTN1-203ENST00000389195 TADA2AO75478 443 aa10.53□□□□□ -0.72
LTN1-203ENST00000389195 HMBSP08397 361 aa10.53□□□□□ -0.72
LTN1-203ENST00000389195 ODC1P11926 461 aa10.53□□□□□ -0.72
LTN1-203ENST00000389195 VAV1P15498 845 aa10.53□□□□□ -0.72
LTN1-203ENST00000389195 CHN1P15882 459 aa10.53□□□□□ -0.72
LTN1-203ENST00000389195 ACTN2P35609 894 aa10.53□□□□□ -0.72
LTN1-203ENST00000389195 LHX1P48742 406 aa10.53□□□□□ -0.72
LTN1-203ENST00000389195 NOMO1Q15155 1222 aa10.53□□□□□ -0.72
LTN1-203ENST00000389195 TMED2Q15363 201 aa10.53□□□□□ -0.72
LTN1-203ENST00000389195 QPCTQ16769 361 aa10.53□□□□□ -0.72
LTN1-203ENST00000389195 NOMO2Q5JPE7 1267 aa10.53□□□□□ -0.72
LTN1-203ENST00000389195 NCBP2-AS2Q69YL0 99 aa10.53□□□□□ -0.72
LTN1-203ENST00000389195 C4orf33Q8N1A6 199 aa10.53□□□□□ -0.72
LTN1-203ENST00000389195 FBXO36Q8NEA4 188 aa10.53□□□□□ -0.72
LTN1-203ENST00000389195 THOC1Q96FV9 657 aaKnown RBP10.53□□□□□ -0.72
LTN1-203ENST00000389195 TKTL2Q9H0I9 626 aa10.53□□□□□ -0.72
LTN1-203ENST00000389195 ETNK1Q9HBU6 452 aa10.53□□□□□ -0.72
LTN1-203ENST00000389195 POPDC2Q9HBU9 364 aa10.53□□□□□ -0.72
LTN1-203ENST00000389195 RGS18Q9NS28 235 aa10.53□□□□□ -0.72
LTN1-203ENST00000389195 TTLL3Q9Y4R7 772 aa10.53□□□□□ -0.72
LTN1-203ENST00000389195 SHROOM3Q8TF72 1996 aa10.53□□□□□ -0.72
LTN1-203ENST00000389195 TRIOO75962 3097 aa10.53□□□□□ -0.72
LTN1-203ENST00000389195 A0A1W2PPM1 405 aa10.53□□□□□ -0.72
LTN1-203ENST00000389195 ADAM12O43184 909 aa10.53□□□□□ -0.72
LTN1-203ENST00000389195 GCAP28676 217 aa10.53□□□□□ -0.72
LTN1-203ENST00000389195 SLMAPQ14BN4 828 aa10.53□□□□□ -0.72
LTN1-203ENST00000389195 INTS6LQ5JSJ4 861 aaKnown RBP10.53□□□□□ -0.72
LTN1-203ENST00000389195 CES3Q6UWW8 571 aa10.53□□□□□ -0.72
LTN1-203ENST00000389195 ARHGAP36Q6ZRI8 547 aa10.53□□□□□ -0.72
LTN1-203ENST00000389195 KDELC2Q7Z4H8 507 aa10.53□□□□□ -0.72
LTN1-203ENST00000389195 TTC39CQ8N584 583 aa10.53□□□□□ -0.72
LTN1-203ENST00000389195 NPWQ8N729 165 aa10.53□□□□□ -0.72
LTN1-203ENST00000389195 EIF1ADQ8N9N8 165 aaKnown RBP10.53□□□□□ -0.72
LTN1-203ENST00000389195 STK32AQ8WU08 396 aa10.53□□□□□ -0.72
LTN1-203ENST00000389195 BCL7CQ8WUZ0 217 aaPredicted RBP10.53□□□□□ -0.72
LTN1-203ENST00000389195 CENPIQ92674 756 aaPredicted RBP10.53□□□□□ -0.72
LTN1-203ENST00000389195 CFAP36Q96G28 342 aa10.53□□□□□ -0.72
LTN1-203ENST00000389195 HSFY1Q96LI6 401 aa10.53□□□□□ -0.72
LTN1-203ENST00000389195 NPY6RQ99463 290 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms