RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 CLEC20AQ6ZU45 233 aa16.83■□□□□ 0.28
VCX3A-201ENST00000381089 PROSER1Q86XN7 944 aa16.83■□□□□ 0.28
VCX3A-201ENST00000381089 CADM4Q8NFZ8 388 aa16.83■□□□□ 0.28
VCX3A-201ENST00000381089 TMC2Q8TDI7 906 aa16.83■□□□□ 0.28
VCX3A-201ENST00000381089 TMEM174Q8WUU8 243 aa16.83■□□□□ 0.28
VCX3A-201ENST00000381089 ADAMTS14Q8WXS8 1223 aa16.83■□□□□ 0.28
VCX3A-201ENST00000381089 CYFIP2Q96F07 1278 aa16.83■□□□□ 0.28
VCX3A-201ENST00000381089 NT5C1AQ9BXI3 368 aa16.83■□□□□ 0.28
VCX3A-201ENST00000381089 DCLK3Q9C098 648 aa16.83■□□□□ 0.28
VCX3A-201ENST00000381089 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.83■□□□□ 0.28
VCX3A-201ENST00000381089 HMGXB4Q9UGU5 601 aa16.83■□□□□ 0.28
VCX3A-201ENST00000381089 STON1Q9Y6Q2 735 aa16.83■□□□□ 0.28
VCX3A-201ENST00000381089 K7ELQ4 463 aaPredicted RBP16.82■□□□□ 0.28
VCX3A-201ENST00000381089 GJB3O75712 270 aa16.82■□□□□ 0.28
VCX3A-201ENST00000381089 CER1O95813 267 aa16.82■□□□□ 0.28
VCX3A-201ENST00000381089 ASS1P00966 412 aaKnown RBP16.82■□□□□ 0.28
VCX3A-201ENST00000381089 CYBBP04839 570 aa16.82■□□□□ 0.28
VCX3A-201ENST00000381089 CISD3P0C7P0 127 aa16.82■□□□□ 0.28
VCX3A-201ENST00000381089 FTH1P19P0C7X4 201 aa16.82■□□□□ 0.28
VCX3A-201ENST00000381089 ACADMP11310 421 aa16.82■□□□□ 0.28
VCX3A-201ENST00000381089 NCAM1P13591 858 aa16.82■□□□□ 0.28
VCX3A-201ENST00000381089 ASPAP45381 313 aa16.82■□□□□ 0.28
VCX3A-201ENST00000381089 ME1P48163 572 aa16.82■□□□□ 0.28
VCX3A-201ENST00000381089 COG7P83436 770 aa16.82■□□□□ 0.28
VCX3A-201ENST00000381089 FUT11Q495W5 492 aa16.82■□□□□ 0.28
VCX3A-201ENST00000381089 IL27RAQ6UWB1 636 aa16.82■□□□□ 0.28
VCX3A-201ENST00000381089 Q6ZNB5 142 aa16.82■□□□□ 0.28
VCX3A-201ENST00000381089 CCDC150Q8NCX0 1101 aa16.82■□□□□ 0.28
VCX3A-201ENST00000381089 SNX21Q969T3 373 aa16.82■□□□□ 0.28
VCX3A-201ENST00000381089 ELMO3Q96BJ8 720 aa16.82■□□□□ 0.28
VCX3A-201ENST00000381089 TOE1Q96GM8 510 aaKnown RBP16.82■□□□□ 0.28
VCX3A-201ENST00000381089 CAMK1GQ96NX5 476 aa16.82■□□□□ 0.28
VCX3A-201ENST00000381089 SLC6A17Q9H1V8 727 aa16.82■□□□□ 0.28
VCX3A-201ENST00000381089 CYP3A43Q9HB55 503 aa16.82■□□□□ 0.28
VCX3A-201ENST00000381089 DMAC2Q9NW81 257 aa16.82■□□□□ 0.28
VCX3A-201ENST00000381089 OSER1Q9NX31 292 aa16.82■□□□□ 0.28
VCX3A-201ENST00000381089 WSB2Q9NYS7 404 aaPredicted RBP16.82■□□□□ 0.28
VCX3A-201ENST00000381089 PLK2Q9NYY3 685 aa16.82■□□□□ 0.28
VCX3A-201ENST00000381089 SLC27A6Q9Y2P4 619 aa16.82■□□□□ 0.28
VCX3A-201ENST00000381089 DSPP15924 2871 aaKnown RBP16.81■□□□□ 0.28
VCX3A-201ENST00000381089 MDM4O15151 490 aa16.81■□□□□ 0.28
VCX3A-201ENST00000381089 STC2O76061 302 aa16.81■□□□□ 0.28
VCX3A-201ENST00000381089 KIF20AO95235 890 aa16.81■□□□□ 0.28
VCX3A-201ENST00000381089 NR3C1P04150 777 aa16.81■□□□□ 0.28
VCX3A-201ENST00000381089 PDIA4P13667 645 aaKnown RBP16.81■□□□□ 0.28
VCX3A-201ENST00000381089 MAOBP27338 520 aa16.81■□□□□ 0.28
VCX3A-201ENST00000381089 DLG4P78352 724 aa16.81■□□□□ 0.28
VCX3A-201ENST00000381089 ARID5AQ03989 594 aa16.81■□□□□ 0.28
VCX3A-201ENST00000381089 INCA1Q0VD86 236 aa16.81■□□□□ 0.28
VCX3A-201ENST00000381089 SCAPQ12770 1279 aa16.81■□□□□ 0.28
VCX3A-201ENST00000381089 CEP135Q66GS9 1140 aa16.81■□□□□ 0.28
VCX3A-201ENST00000381089 SV2AQ7L0J3 742 aa16.81■□□□□ 0.28
VCX3A-201ENST00000381089 GPRIN1Q7Z2K8 1008 aa16.81■□□□□ 0.28
VCX3A-201ENST00000381089 CCDC186Q7Z3E2 898 aa16.81■□□□□ 0.28
VCX3A-201ENST00000381089 ANKS1BQ7Z6G8 1248 aa16.81■□□□□ 0.28
VCX3A-201ENST00000381089 ZNF276Q8N554 614 aa16.81■□□□□ 0.28
VCX3A-201ENST00000381089 DNASE2BQ8WZ79 361 aa16.81■□□□□ 0.28
VCX3A-201ENST00000381089 PRCCQ92733 491 aaPredicted RBP16.81■□□□□ 0.28
VCX3A-201ENST00000381089 SIPA1Q96FS4 1042 aa16.81■□□□□ 0.28
VCX3A-201ENST00000381089 GPR174Q9BXC1 333 aa16.81■□□□□ 0.28
VCX3A-201ENST00000381089 MIR1-1HGQ9H1L0 117 aa16.81■□□□□ 0.28
VCX3A-201ENST00000381089 NMUR1Q9HB89 426 aa16.81■□□□□ 0.28
VCX3A-201ENST00000381089 ITM2CQ9NQX7 267 aa16.81■□□□□ 0.28
VCX3A-201ENST00000381089 CLIC5Q9NZA1 410 aa16.81■□□□□ 0.28
VCX3A-201ENST00000381089 USP36Q9P275 1121 aaKnown RBP16.81■□□□□ 0.28
VCX3A-201ENST00000381089 FBXO10Q9UK96 956 aa16.81■□□□□ 0.28
VCX3A-201ENST00000381089 NUDT5Q9UKK9 219 aa16.81■□□□□ 0.28
VCX3A-201ENST00000381089 ANKRD11Q6UB99 2663 aaPredicted RBP16.81■□□□□ 0.28
VCX3A-201ENST00000381089 WASH3PC4AMC7 463 aa16.8■□□□□ 0.28
VCX3A-201ENST00000381089 HHLA1C9JL84 531 aa16.8■□□□□ 0.28
VCX3A-201ENST00000381089 PDXKO00764 312 aa16.8■□□□□ 0.28
VCX3A-201ENST00000381089 CALUO43852 315 aaPredicted RBP16.8■□□□□ 0.28
VCX3A-201ENST00000381089 PENKP01210 267 aaPredicted RBP16.8■□□□□ 0.28
VCX3A-201ENST00000381089 HLA-DRAP01903 254 aa16.8■□□□□ 0.28
VCX3A-201ENST00000381089 HOXB3P14651 431 aaPredicted RBP16.8■□□□□ 0.28
VCX3A-201ENST00000381089 KIF11P52732 1056 aa16.8■□□□□ 0.28
VCX3A-201ENST00000381089 MFAP3P55082 362 aa16.8■□□□□ 0.28
VCX3A-201ENST00000381089 EIF4HQ15056 248 aaKnown RBP16.8■□□□□ 0.28
VCX3A-201ENST00000381089 SPOPLQ6IQ16 392 aa16.8■□□□□ 0.28
VCX3A-201ENST00000381089 ARHGAP18Q8N392 663 aa16.8■□□□□ 0.28
VCX3A-201ENST00000381089 ZCCHC9Q8N567 271 aaKnown RBP16.8■□□□□ 0.28
VCX3A-201ENST00000381089 SETD7Q8WTS6 366 aaKnown RBP16.8■□□□□ 0.28
VCX3A-201ENST00000381089 CCDC86Q9H6F5 360 aaKnown RBP16.8■□□□□ 0.28
VCX3A-201ENST00000381089 CD93Q9NPY3 652 aa16.8■□□□□ 0.28
VCX3A-201ENST00000381089 THAP10Q9P2Z0 257 aaPredicted RBP16.8■□□□□ 0.28
VCX3A-201ENST00000381089 RASAL2Q9UJF2 1139 aa16.8■□□□□ 0.28
VCX3A-201ENST00000381089 STRIP2Q9ULQ0 834 aa16.8■□□□□ 0.28
VCX3A-201ENST00000381089 FREM2Q5SZK8 3169 aa16.79■□□□□ 0.28
VCX3A-201ENST00000381089 BCAT2O15382 392 aaPredicted RBP16.79■□□□□ 0.28
VCX3A-201ENST00000381089 ZNF883P0CG24 379 aa16.79■□□□□ 0.28
VCX3A-201ENST00000381089 MATKP42679 507 aa16.79■□□□□ 0.28
VCX3A-201ENST00000381089 IL12RB1P42701 662 aa16.79■□□□□ 0.28
VCX3A-201ENST00000381089 TPMTP51580 245 aa16.79■□□□□ 0.28
VCX3A-201ENST00000381089 STK4Q13043 487 aa16.79■□□□□ 0.28
VCX3A-201ENST00000381089 DCAF12L1Q5VU92 463 aa16.79■□□□□ 0.28
VCX3A-201ENST00000381089 FYB2Q5VWT5 728 aa16.79■□□□□ 0.28
VCX3A-201ENST00000381089 RESP18Q5W5W9 173 aa16.79■□□□□ 0.28
VCX3A-201ENST00000381089 GLRX5Q86SX6 157 aa16.79■□□□□ 0.28
VCX3A-201ENST00000381089 TMPRSS6Q8IU80 811 aa16.79■□□□□ 0.28
VCX3A-201ENST00000381089 NUP58Q9BVL2 599 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms