RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 WDR3Q9UNX4 943 aaKnown RBP eCLIP25.83■■□□□ 1.73
TNFRSF4-201ENST00000379236 SGK1O00141 431 aa25.82■■□□□ 1.72
TNFRSF4-201ENST00000379236 EPN2O95208 641 aa25.82■■□□□ 1.72
TNFRSF4-201ENST00000379236 CYBBP04839 570 aa25.82■■□□□ 1.72
TNFRSF4-201ENST00000379236 DGKGP49619 791 aa25.82■■□□□ 1.72
TNFRSF4-201ENST00000379236 RGS7P49802 495 aa25.82■■□□□ 1.72
TNFRSF4-201ENST00000379236 SDE2Q6IQ49 451 aa25.82■■□□□ 1.72
TNFRSF4-201ENST00000379236 PGBD3Q8N328 593 aa25.82■■□□□ 1.72
TNFRSF4-201ENST00000379236 TFAP2BQ92481 460 aa25.82■■□□□ 1.72
TNFRSF4-201ENST00000379236 ARRDC1-AS1Q9H2J1 176 aa25.82■■□□□ 1.72
TNFRSF4-201ENST00000379236 ABCC13Q9NSE7 274 aa25.82■■□□□ 1.72
TNFRSF4-201ENST00000379236 DYNC1LI1Q9Y6G9 523 aaKnown RBP25.82■■□□□ 1.72
TNFRSF4-201ENST00000379236 SDK1Q7Z5N4 2213 aa25.82■■□□□ 1.72
TNFRSF4-201ENST00000379236 RNF225M0QZC1 329 aaPredicted RBP25.81■■□□□ 1.72
TNFRSF4-201ENST00000379236 TGM1P22735 817 aa25.81■■□□□ 1.72
TNFRSF4-201ENST00000379236 MTIF2P46199 727 aaKnown RBP25.81■■□□□ 1.72
TNFRSF4-201ENST00000379236 BSPRYQ5W0U4 402 aa25.81■■□□□ 1.72
TNFRSF4-201ENST00000379236 TMEM92Q6UXU6 159 aa25.81■■□□□ 1.72
TNFRSF4-201ENST00000379236 PRR23CQ6ZRP0 262 aa25.81■■□□□ 1.72
TNFRSF4-201ENST00000379236 RASSF3Q86WH2 238 aa25.81■■□□□ 1.72
TNFRSF4-201ENST00000379236 DENND1CQ8IV53 801 aa25.81■■□□□ 1.72
TNFRSF4-201ENST00000379236 MDGA1Q8NFP4 955 aa25.81■■□□□ 1.72
TNFRSF4-201ENST00000379236 EDEM1Q92611 657 aa25.81■■□□□ 1.72
TNFRSF4-201ENST00000379236 ZC3H10Q96K80 434 aaKnown RBP25.81■■□□□ 1.72
TNFRSF4-201ENST00000379236 FAM81BQ96LP2 452 aa25.81■■□□□ 1.72
TNFRSF4-201ENST00000379236 CLSTN2Q9H4D0 955 aa25.81■■□□□ 1.72
TNFRSF4-201ENST00000379236 UBE2TQ9NPD8 197 aaPredicted RBP25.81■■□□□ 1.72
TNFRSF4-201ENST00000379236 PLK2Q9NYY3 685 aa25.81■■□□□ 1.72
TNFRSF4-201ENST00000379236 NUP205Q92621 2012 aa25.81■■□□□ 1.72
TNFRSF4-201ENST00000379236 PIK3R2O00459 728 aa25.8■■□□□ 1.72
TNFRSF4-201ENST00000379236 TRIM24O15164 1050 aa25.8■■□□□ 1.72
TNFRSF4-201ENST00000379236 ZBTB24O43167 697 aaPredicted RBP25.8■■□□□ 1.72
TNFRSF4-201ENST00000379236 HARS2P49590 506 aaKnown RBP25.8■■□□□ 1.72
TNFRSF4-201ENST00000379236 MFAP3P55082 362 aa25.8■■□□□ 1.72
TNFRSF4-201ENST00000379236 PLK5Q496M5 336 aa25.8■■□□□ 1.72
TNFRSF4-201ENST00000379236 PKDCCQ504Y2 493 aa25.8■■□□□ 1.72
TNFRSF4-201ENST00000379236 FMNL3Q8IVF7 1028 aa25.8■■□□□ 1.72
TNFRSF4-201ENST00000379236 C12orf50Q8NA57 414 aaPredicted RBP25.8■■□□□ 1.72
TNFRSF4-201ENST00000379236 SPACA7Q96KW9 195 aa25.8■■□□□ 1.72
TNFRSF4-201ENST00000379236 DACH1Q9UI36 760 aa25.8■■□□□ 1.72
TNFRSF4-201ENST00000379236 AGO1Q9UL18 857 aaKnown RBP25.8■■□□□ 1.72
TNFRSF4-201ENST00000379236 INVSQ9Y283 1065 aa25.8■■□□□ 1.72
TNFRSF4-201ENST00000379236 DCHS1Q96JQ0 3298 aa25.8■■□□□ 1.72
TNFRSF4-201ENST00000379236 TCRBV21S2A2A0A5A6 115 aa25.79■■□□□ 1.72
TNFRSF4-201ENST00000379236 YJEFN3A6XGL0 299 aa25.79■■□□□ 1.72
TNFRSF4-201ENST00000379236 E7ENQ6 273 aa25.79■■□□□ 1.72
TNFRSF4-201ENST00000379236 DCLK1O15075 740 aa25.79■■□□□ 1.72
TNFRSF4-201ENST00000379236 MED7O43513 233 aa25.79■■□□□ 1.72
TNFRSF4-201ENST00000379236 KLKB1P03952 638 aa25.79■■□□□ 1.72
TNFRSF4-201ENST00000379236 HOXB2P14652 356 aa25.79■■□□□ 1.72
TNFRSF4-201ENST00000379236 DAOAP59103 153 aa25.79■■□□□ 1.72
TNFRSF4-201ENST00000379236 AASDHQ4L235 1098 aaPredicted RBP25.79■■□□□ 1.72
TNFRSF4-201ENST00000379236 GBP6Q6ZN66 633 aa25.79■■□□□ 1.72
TNFRSF4-201ENST00000379236 ENOSF1Q7L5Y1 443 aa25.79■■□□□ 1.72
TNFRSF4-201ENST00000379236 SCML4Q8N228 414 aa25.79■■□□□ 1.72
TNFRSF4-201ENST00000379236 SLC35F5Q8WV83 523 aa25.79■■□□□ 1.72
TNFRSF4-201ENST00000379236 HMGB4Q8WW32 186 aa25.79■■□□□ 1.72
TNFRSF4-201ENST00000379236 NUP62CLQ9H1M0 184 aa25.79■■□□□ 1.72
TNFRSF4-201ENST00000379236 DUSP15Q9H1R2 295 aaPredicted RBP25.79■■□□□ 1.72
TNFRSF4-201ENST00000379236 DLL3Q9NYJ7 618 aa25.79■■□□□ 1.72
TNFRSF4-201ENST00000379236 HBS1LQ9Y450 684 aaKnown RBP25.79■■□□□ 1.72
TNFRSF4-201ENST00000379236 PCDHGA5Q9Y5G8 931 aa25.79■■□□□ 1.72
TNFRSF4-201ENST00000379236 CEP250Q9BV73 2442 aa25.79■■□□□ 1.72
TNFRSF4-201ENST00000379236 CEP192Q8TEP8 1941 aa25.78■■□□□ 1.72
TNFRSF4-201ENST00000379236 PLXND1Q9Y4D7 1925 aa25.78■■□□□ 1.72
TNFRSF4-201ENST00000379236 NTSR1P30989 418 aa25.78■■□□□ 1.72
TNFRSF4-201ENST00000379236 PMF1Q6P1K2 205 aa25.78■■□□□ 1.72
TNFRSF4-201ENST00000379236 BHLHA9Q7RTU4 235 aa25.78■■□□□ 1.72
TNFRSF4-201ENST00000379236 FAM114A1Q8IWE2 563 aa25.78■■□□□ 1.72
TNFRSF4-201ENST00000379236 CHPFQ8IZ52 775 aa25.78■■□□□ 1.72
TNFRSF4-201ENST00000379236 IRGQQ8WZA9 623 aa25.78■■□□□ 1.72
TNFRSF4-201ENST00000379236 HSFY1Q96LI6 401 aa25.78■■□□□ 1.72
TNFRSF4-201ENST00000379236 KREMEN1Q96MU8 473 aa25.78■■□□□ 1.72
TNFRSF4-201ENST00000379236 CRACR2AQ9BSW2 395 aa25.78■■□□□ 1.72
TNFRSF4-201ENST00000379236 ST7Q9NRC1 585 aa25.78■■□□□ 1.72
TNFRSF4-201ENST00000379236 SFMBT1Q9UHJ3 866 aa25.78■■□□□ 1.72
TNFRSF4-201ENST00000379236 STARD13Q9Y3M8 1113 aa25.78■■□□□ 1.72
TNFRSF4-201ENST00000379236 LOC105378220A0A1B0GUY1 285 aaPredicted RBP25.77■■□□□ 1.72
TNFRSF4-201ENST00000379236 FBXO21O94952 628 aa25.77■■□□□ 1.72
TNFRSF4-201ENST00000379236 CALCAP01258 141 aa25.77■■□□□ 1.72
TNFRSF4-201ENST00000379236 USP8P40818 1118 aa25.77■■□□□ 1.72
TNFRSF4-201ENST00000379236 WASP42768 502 aa25.77■■□□□ 1.72
TNFRSF4-201ENST00000379236 ZNF132P52740 706 aa25.77■■□□□ 1.72
TNFRSF4-201ENST00000379236 BYSLQ13895 437 aaKnown RBP25.77■■□□□ 1.72
TNFRSF4-201ENST00000379236 CCDC6Q16204 474 aa25.77■■□□□ 1.72
TNFRSF4-201ENST00000379236 EGFLAMQ63HQ2 1017 aa25.77■■□□□ 1.72
TNFRSF4-201ENST00000379236 TRIM65Q6PJ69 517 aa25.77■■□□□ 1.72
TNFRSF4-201ENST00000379236 TOGARAM2Q6ZUX3 1019 aa25.77■■□□□ 1.72
TNFRSF4-201ENST00000379236 NETO1Q8TDF5 533 aa25.77■■□□□ 1.72
TNFRSF4-201ENST00000379236 DDI1Q8WTU0 396 aa25.77■■□□□ 1.72
TNFRSF4-201ENST00000379236 MAP3K13O43283 966 aa25.76■■□□□ 1.71
TNFRSF4-201ENST00000379236 ADAM23O75077 832 aa25.76■■□□□ 1.71
TNFRSF4-201ENST00000379236 HNRNPLP14866 589 aaKnown RBP eCLIP25.76■■□□□ 1.71
TNFRSF4-201ENST00000379236 MPLP40238 635 aa25.76■■□□□ 1.71
TNFRSF4-201ENST00000379236 CREB5Q02930 508 aa25.76■■□□□ 1.71
TNFRSF4-201ENST00000379236 CPXM2Q8N436 756 aa25.76■■□□□ 1.71
TNFRSF4-201ENST00000379236 ZSWIM1Q9BR11 485 aa25.76■■□□□ 1.71
TNFRSF4-201ENST00000379236 RTKNQ9BST9 563 aa25.76■■□□□ 1.71
TNFRSF4-201ENST00000379236 MIS12Q9H081 205 aa25.76■■□□□ 1.71
TNFRSF4-201ENST00000379236 ABCA7Q8IZY2 2146 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms