RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 GOLGA4Q13439 2230 aaKnown RBP18.73■□□□□ 0.59
PDLIM4-202ENST00000379018 GFRA2O00451 464 aa18.72■□□□□ 0.59
PDLIM4-202ENST00000379018 AFMP43652 599 aa18.72■□□□□ 0.59
PDLIM4-202ENST00000379018 NASPP49321 788 aaPredicted RBP18.72■□□□□ 0.59
PDLIM4-202ENST00000379018 SNRPFP62306 86 aaKnown RBP18.72■□□□□ 0.59
PDLIM4-202ENST00000379018 KNOP1Q1ED39 458 aaKnown RBP18.72■□□□□ 0.59
PDLIM4-202ENST00000379018 SOWAHCQ53LP3 525 aaPredicted RBP18.72■□□□□ 0.59
PDLIM4-202ENST00000379018 CLEC20AQ6ZU45 233 aa18.72■□□□□ 0.59
PDLIM4-202ENST00000379018 LINC00301Q8NCQ3 95 aa18.72■□□□□ 0.59
PDLIM4-202ENST00000379018 PARD3BQ8TEW8 1205 aa18.72■□□□□ 0.59
PDLIM4-202ENST00000379018 P2RY11Q96G91 374 aa18.72■□□□□ 0.59
PDLIM4-202ENST00000379018 C7orf25Q9BPX7 421 aa18.72■□□□□ 0.59
PDLIM4-202ENST00000379018 ZDHHC5Q9C0B5 715 aa18.72■□□□□ 0.59
PDLIM4-202ENST00000379018 EIF2B4Q9UI10 523 aaKnown RBP18.72■□□□□ 0.59
PDLIM4-202ENST00000379018 RASAL2Q9UJF2 1139 aa18.72■□□□□ 0.59
PDLIM4-202ENST00000379018 SCML2Q9UQR0 700 aa18.72■□□□□ 0.59
PDLIM4-202ENST00000379018 KNL1Q8NG31 2342 aa18.71■□□□□ 0.59
PDLIM4-202ENST00000379018 KCNJ18B7U540 433 aa18.71■□□□□ 0.59
PDLIM4-202ENST00000379018 BCAT2O15382 392 aaPredicted RBP18.71■□□□□ 0.59
PDLIM4-202ENST00000379018 CILPO75339 1184 aa18.71■□□□□ 0.59
PDLIM4-202ENST00000379018 STC2O76061 302 aa18.71■□□□□ 0.59
PDLIM4-202ENST00000379018 CER1O95813 267 aa18.71■□□□□ 0.59
PDLIM4-202ENST00000379018 C4BPAP04003 597 aaKnown RBP18.71■□□□□ 0.59
PDLIM4-202ENST00000379018 ACADMP11310 421 aa18.71■□□□□ 0.59
PDLIM4-202ENST00000379018 PIK3CAP42336 1068 aa18.71■□□□□ 0.59
PDLIM4-202ENST00000379018 MATKP42679 507 aa18.71■□□□□ 0.59
PDLIM4-202ENST00000379018 PLA2G4AP47712 749 aa18.71■□□□□ 0.59
PDLIM4-202ENST00000379018 TPMTP51580 245 aa18.71■□□□□ 0.59
PDLIM4-202ENST00000379018 DLG4P78352 724 aa18.71■□□□□ 0.59
PDLIM4-202ENST00000379018 GEN1Q17RS7 908 aa18.71■□□□□ 0.59
PDLIM4-202ENST00000379018 FOXD4L6Q3SYB3 417 aaPredicted RBP18.71■□□□□ 0.59
PDLIM4-202ENST00000379018 FOXD4L5Q5VV16 416 aaPredicted RBP18.71■□□□□ 0.59
PDLIM4-202ENST00000379018 FOXD4L3Q6VB84 417 aaPredicted RBP18.71■□□□□ 0.59
PDLIM4-202ENST00000379018 Q6ZNB5 142 aa18.71■□□□□ 0.59
PDLIM4-202ENST00000379018 TMPRSS6Q8IU80 811 aa18.71■□□□□ 0.59
PDLIM4-202ENST00000379018 UCMAQ8WVF2 138 aa18.71■□□□□ 0.59
PDLIM4-202ENST00000379018 FOXD4L4Q8WXT5 416 aaPredicted RBP18.71■□□□□ 0.59
PDLIM4-202ENST00000379018 SIPA1Q96FS4 1042 aa18.71■□□□□ 0.59
PDLIM4-202ENST00000379018 LRIG1Q96JA1 1093 aa18.71■□□□□ 0.59
PDLIM4-202ENST00000379018 CSNK1G1Q9HCP0 422 aa18.71■□□□□ 0.59
PDLIM4-202ENST00000379018 TM7SF3Q9NS93 570 aa18.71■□□□□ 0.59
PDLIM4-202ENST00000379018 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.71■□□□□ 0.59
PDLIM4-202ENST00000379018 USP36Q9P275 1121 aaKnown RBP18.71■□□□□ 0.59
PDLIM4-202ENST00000379018 NUMA1Q14980 2115 aa18.7■□□□□ 0.58
PDLIM4-202ENST00000379018 A0A1B0GVT2 93 aa18.7■□□□□ 0.58
PDLIM4-202ENST00000379018 POLR2DO15514 142 aaKnown RBP18.7■□□□□ 0.58
PDLIM4-202ENST00000379018 CBFA2T3O75081 653 aa18.7■□□□□ 0.58
PDLIM4-202ENST00000379018 TRIM21P19474 475 aaKnown RBP18.7■□□□□ 0.58
PDLIM4-202ENST00000379018 AP3M2P53677 418 aa18.7■□□□□ 0.58
PDLIM4-202ENST00000379018 MFAP3P55082 362 aa18.7■□□□□ 0.58
PDLIM4-202ENST00000379018 EFEMP1Q12805 493 aa18.7■□□□□ 0.58
PDLIM4-202ENST00000379018 BMT2Q1RMZ1 405 aa18.7■□□□□ 0.58
PDLIM4-202ENST00000379018 HLA-BQ31612 363 aa18.7■□□□□ 0.58
PDLIM4-202ENST00000379018 SHC4Q6S5L8 630 aa18.7■□□□□ 0.58
PDLIM4-202ENST00000379018 C12orf56Q8IXR9 622 aa18.7■□□□□ 0.58
PDLIM4-202ENST00000379018 GRAMD1CQ8IYS0 662 aa18.7■□□□□ 0.58
PDLIM4-202ENST00000379018 SORCS1Q8WY21 1168 aa18.7■□□□□ 0.58
PDLIM4-202ENST00000379018 PRCCQ92733 491 aaPredicted RBP18.7■□□□□ 0.58
PDLIM4-202ENST00000379018 TWNKQ96RR1 684 aa18.7■□□□□ 0.58
PDLIM4-202ENST00000379018 CIPCQ9C0C6 399 aa18.7■□□□□ 0.58
PDLIM4-202ENST00000379018 ZSCAN16Q9H4T2 348 aaPredicted RBP18.7■□□□□ 0.58
PDLIM4-202ENST00000379018 CGNQ9P2M7 1197 aaKnown RBP18.7■□□□□ 0.58
PDLIM4-202ENST00000379018 THAP10Q9P2Z0 257 aaPredicted RBP18.7■□□□□ 0.58
PDLIM4-202ENST00000379018 MORC2Q9Y6X9 1032 aaPredicted RBP18.7■□□□□ 0.58
PDLIM4-202ENST00000379018 HHLA1C9JL84 531 aa18.69■□□□□ 0.58
PDLIM4-202ENST00000379018 ATXN1LP0C7T5 689 aaKnown RBP18.69■□□□□ 0.58
PDLIM4-202ENST00000379018 CD58P19256 250 aa18.69■□□□□ 0.58
PDLIM4-202ENST00000379018 PRKCHP24723 683 aa18.69■□□□□ 0.58
PDLIM4-202ENST00000379018 CORO1AP31146 461 aaKnown RBP18.69■□□□□ 0.58
PDLIM4-202ENST00000379018 ASPAP45381 313 aa18.69■□□□□ 0.58
PDLIM4-202ENST00000379018 BNC1Q01954 994 aa18.69■□□□□ 0.58
PDLIM4-202ENST00000379018 ARID5AQ03989 594 aa18.69■□□□□ 0.58
PDLIM4-202ENST00000379018 EHHADHQ08426 723 aa18.69■□□□□ 0.58
PDLIM4-202ENST00000379018 CUL4BQ13620 913 aa18.69■□□□□ 0.58
PDLIM4-202ENST00000379018 SGSM1Q2NKQ1 1148 aa18.69■□□□□ 0.58
PDLIM4-202ENST00000379018 ANKS1BQ7Z6G8 1248 aa18.69■□□□□ 0.58
PDLIM4-202ENST00000379018 CRYBG2Q8N1P7 616 aa18.69■□□□□ 0.58
PDLIM4-202ENST00000379018 RHBDD1Q8TEB9 315 aa18.69■□□□□ 0.58
PDLIM4-202ENST00000379018 DNASE2BQ8WZ79 361 aa18.69■□□□□ 0.58
PDLIM4-202ENST00000379018 CYFIP2Q96F07 1278 aa18.69■□□□□ 0.58
PDLIM4-202ENST00000379018 ITM2CQ9NQX7 267 aa18.69■□□□□ 0.58
PDLIM4-202ENST00000379018 PCDHA5Q9Y5H7 936 aa18.69■□□□□ 0.58
PDLIM4-202ENST00000379018 LAMA5O15230 3695 aa18.69■□□□□ 0.58
PDLIM4-202ENST00000379018 LOC400499M0QZD8 3231 aa18.68■□□□□ 0.58
PDLIM4-202ENST00000379018 EIF4E1BA6NMX2 242 aaKnown RBP18.68■□□□□ 0.58
PDLIM4-202ENST00000379018 STX6O43752 255 aa18.68■□□□□ 0.58
PDLIM4-202ENST00000379018 HLA-DRAP01903 254 aa18.68■□□□□ 0.58
PDLIM4-202ENST00000379018 KLKB1P03952 638 aa18.68■□□□□ 0.58
PDLIM4-202ENST00000379018 EPHX1P07099 455 aa18.68■□□□□ 0.58
PDLIM4-202ENST00000379018 RALAP11233 206 aa18.68■□□□□ 0.58
PDLIM4-202ENST00000379018 HLA-EP13747 358 aa18.68■□□□□ 0.58
PDLIM4-202ENST00000379018 CSNK1EP49674 416 aaKnown RBP18.68■□□□□ 0.58
PDLIM4-202ENST00000379018 ZNF234Q14588 700 aa18.68■□□□□ 0.58
PDLIM4-202ENST00000379018 FYB2Q5VWT5 728 aa18.68■□□□□ 0.58
PDLIM4-202ENST00000379018 CEP135Q66GS9 1140 aa18.68■□□□□ 0.58
PDLIM4-202ENST00000379018 CNNM4Q6P4Q7 775 aa18.68■□□□□ 0.58
PDLIM4-202ENST00000379018 UNC93AQ86WB7 457 aa18.68■□□□□ 0.58
PDLIM4-202ENST00000379018 CLEC4EQ9ULY5 219 aa18.68■□□□□ 0.58
PDLIM4-202ENST00000379018 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.68■□□□□ 0.58
PDLIM4-202ENST00000379018 SLCO1B1Q9Y6L6 691 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms