RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 KLKB1P03952 638 aa19.55■□□□□ 0.72
SSU72-203ENST00000378725 FAM228BP0C875 321 aa19.55■□□□□ 0.72
SSU72-203ENST00000378725 IRF1P10914 325 aa19.55■□□□□ 0.72
SSU72-203ENST00000378725 EIF4A3P38919 411 aaKnown RBP19.55■□□□□ 0.72
SSU72-203ENST00000378725 MATKP42679 507 aa19.55■□□□□ 0.72
SSU72-203ENST00000378725 EML3Q32P44 896 aa19.55■□□□□ 0.72
SSU72-203ENST00000378725 SLC44A4Q53GD3 710 aa19.55■□□□□ 0.72
SSU72-203ENST00000378725 TRIM68Q6AZZ1 485 aa19.55■□□□□ 0.72
SSU72-203ENST00000378725 Q6ZNB5 142 aa19.55■□□□□ 0.72
SSU72-203ENST00000378725 C3orf20Q8ND61 904 aa19.55■□□□□ 0.72
SSU72-203ENST00000378725 TTC16Q8NEE8 873 aa19.55■□□□□ 0.72
SSU72-203ENST00000378725 NT5C3BQ969T7 300 aa19.55■□□□□ 0.72
SSU72-203ENST00000378725 PLD4Q96BZ4 506 aa19.55■□□□□ 0.72
SSU72-203ENST00000378725 CHP1Q99653 195 aa19.55■□□□□ 0.72
SSU72-203ENST00000378725 DDX23Q9BUQ8 820 aaKnown RBP19.55■□□□□ 0.72
SSU72-203ENST00000378725 DCLK3Q9C098 648 aa19.55■□□□□ 0.72
SSU72-203ENST00000378725 HPS4Q9NQG7 708 aa19.55■□□□□ 0.72
SSU72-203ENST00000378725 RRN3Q9NYV6 651 aa19.55■□□□□ 0.72
SSU72-203ENST00000378725 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.55■□□□□ 0.72
SSU72-203ENST00000378725 NENFQ9UMX5 172 aa19.55■□□□□ 0.72
SSU72-203ENST00000378725 WNT6Q9Y6F9 365 aa19.55■□□□□ 0.72
SSU72-203ENST00000378725 SIGLEC16A6NMB1 481 aa19.54■□□□□ 0.72
SSU72-203ENST00000378725 TMCO5BA8MYB1 307 aa19.54■□□□□ 0.72
SSU72-203ENST00000378725 MSI1O43347 362 aaKnown RBP19.54■□□□□ 0.72
SSU72-203ENST00000378725 TRUB2O95900 331 aaKnown RBP19.54■□□□□ 0.72
SSU72-203ENST00000378725 HMBSP08397 361 aa19.54■□□□□ 0.72
SSU72-203ENST00000378725 GLULP15104 373 aa19.54■□□□□ 0.72
SSU72-203ENST00000378725 IFNAR2P48551 515 aa19.54■□□□□ 0.72
SSU72-203ENST00000378725 RNASE9P60153 205 aaKnown RBP19.54■□□□□ 0.72
SSU72-203ENST00000378725 RING1Q06587 406 aa19.54■□□□□ 0.72
SSU72-203ENST00000378725 TNK2Q07912 1038 aa19.54■□□□□ 0.72
SSU72-203ENST00000378725 RUNX3Q13761 415 aa19.54■□□□□ 0.72
SSU72-203ENST00000378725 IER5LQ5T953 404 aa19.54■□□□□ 0.72
SSU72-203ENST00000378725 TRIM67Q6ZTA4 783 aa19.54■□□□□ 0.72
SSU72-203ENST00000378725 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.54■□□□□ 0.72
SSU72-203ENST00000378725 PHLDB2Q86SQ0 1253 aa19.54■□□□□ 0.72
SSU72-203ENST00000378725 TAC4Q86UU9 113 aa19.54■□□□□ 0.72
SSU72-203ENST00000378725 BBS7Q8IWZ6 715 aa19.54■□□□□ 0.72
SSU72-203ENST00000378725 SLC39A13Q96H72 371 aa19.54■□□□□ 0.72
SSU72-203ENST00000378725 SERPINB11Q96P15 392 aa19.54■□□□□ 0.72
SSU72-203ENST00000378725 NPY6RQ99463 290 aa19.54■□□□□ 0.72
SSU72-203ENST00000378725 EBF3Q9H4W6 596 aa19.54■□□□□ 0.72
SSU72-203ENST00000378725 EPHX3Q9H6B9 360 aa19.54■□□□□ 0.72
SSU72-203ENST00000378725 IMPACTQ9P2X3 320 aa19.54■□□□□ 0.72
SSU72-203ENST00000378725 LSM7Q9UK45 103 aaKnown RBP19.54■□□□□ 0.72
SSU72-203ENST00000378725 TLR6Q9Y2C9 796 aa19.54■□□□□ 0.72
SSU72-203ENST00000378725 ZNF510Q9Y2H8 683 aa19.54■□□□□ 0.72
SSU72-203ENST00000378725 OTOL1A6NHN0 477 aaPredicted RBP19.53■□□□□ 0.72
SSU72-203ENST00000378725 KRT3P12035 628 aa19.53■□□□□ 0.72
SSU72-203ENST00000378725 ARSAP15289 507 aa19.53■□□□□ 0.72
SSU72-203ENST00000378725 RRM1P23921 792 aa19.53■□□□□ 0.72
SSU72-203ENST00000378725 FLT3P36888 993 aa19.53■□□□□ 0.72
SSU72-203ENST00000378725 TBX4P57082 545 aa19.53■□□□□ 0.72
SSU72-203ENST00000378725 PITX1P78337 314 aaPredicted RBP19.53■□□□□ 0.72
SSU72-203ENST00000378725 PPP1R15BQ5SWA1 713 aa19.53■□□□□ 0.72
SSU72-203ENST00000378725 TRNP1Q6NT89 227 aa19.53■□□□□ 0.72
SSU72-203ENST00000378725 DNAAF5Q86Y56 855 aa19.53■□□□□ 0.72
SSU72-203ENST00000378725 ADAM32Q8TC27 787 aa19.53■□□□□ 0.72
SSU72-203ENST00000378725 CSGALNACT1Q8TDX6 532 aa19.53■□□□□ 0.72
SSU72-203ENST00000378725 ATP2A3Q93084 1043 aa19.53■□□□□ 0.72
SSU72-203ENST00000378725 PGAP3Q96FM1 320 aaPredicted RBP19.53■□□□□ 0.72
SSU72-203ENST00000378725 PANX2Q96RD6 677 aa19.53■□□□□ 0.72
SSU72-203ENST00000378725 ECT2Q9H8V3 914 aa19.53■□□□□ 0.72
SSU72-203ENST00000378725 METTL5Q9NRN9 209 aaKnown RBP19.53■□□□□ 0.72
SSU72-203ENST00000378725 TMEM51Q9NW97 253 aa19.53■□□□□ 0.72
SSU72-203ENST00000378725 GTSE1Q9NYZ3 720 aa19.53■□□□□ 0.72
SSU72-203ENST00000378725 AGO1Q9UL18 857 aaKnown RBP19.53■□□□□ 0.72
SSU72-203ENST00000378725 HELZP42694 1942 aaKnown RBP19.53■□□□□ 0.72
SSU72-203ENST00000378725 KRBA1A5PL33 1030 aa19.52■□□□□ 0.72
SSU72-203ENST00000378725 IRAK2O43187 625 aa19.52■□□□□ 0.72
SSU72-203ENST00000378725 CORO1AP31146 461 aaKnown RBP19.52■□□□□ 0.72
SSU72-203ENST00000378725 GBP1P32455 592 aa19.52■□□□□ 0.72
SSU72-203ENST00000378725 HARS2P49590 506 aaKnown RBP19.52■□□□□ 0.72
SSU72-203ENST00000378725 SLC18A3Q16572 532 aa19.52■□□□□ 0.72
SSU72-203ENST00000378725 ITPRIPL2Q3MIP1 535 aa19.52■□□□□ 0.72
SSU72-203ENST00000378725 SLC25A52Q3SY17 297 aa19.52■□□□□ 0.72
SSU72-203ENST00000378725 PLEKHA7Q6IQ23 1121 aa19.52■□□□□ 0.72
SSU72-203ENST00000378725 ALKBH5Q6P6C2 394 aaKnown RBP19.52■□□□□ 0.72
SSU72-203ENST00000378725 BNIPLQ7Z465 357 aa19.52■□□□□ 0.72
SSU72-203ENST00000378725 UNC45BQ8IWX7 931 aa19.52■□□□□ 0.72
SSU72-203ENST00000378725 JOSD2Q8TAC2 188 aa19.52■□□□□ 0.72
SSU72-203ENST00000378725 AZIN2Q96A70 460 aa19.52■□□□□ 0.72
SSU72-203ENST00000378725 FCRL2Q96LA5 508 aaPredicted RBP19.52■□□□□ 0.72
SSU72-203ENST00000378725 SELENOOQ9BVL4 669 aa19.52■□□□□ 0.72
SSU72-203ENST00000378725 NHEJ1Q9H9Q4 299 aaPredicted RBP19.52■□□□□ 0.72
SSU72-203ENST00000378725 GRPEL1Q9HAV7 217 aa19.52■□□□□ 0.72
SSU72-203ENST00000378725 HEBP1Q9NRV9 189 aa19.52■□□□□ 0.72
SSU72-203ENST00000378725 STOML2Q9UJZ1 356 aa19.52■□□□□ 0.72
SSU72-203ENST00000378725 FBXL21Q9UKT6 434 aa19.52■□□□□ 0.72
SSU72-203ENST00000378725 STAP1Q9ULZ2 295 aa19.52■□□□□ 0.72
SSU72-203ENST00000378725 KIF26AQ9ULI4 1882 aaPredicted RBP19.52■□□□□ 0.71
SSU72-203ENST00000378725 GOLGA6L3A6NEY3 463 aa19.51■□□□□ 0.71
SSU72-203ENST00000378725 SHISA7A6NL88 538 aa19.51■□□□□ 0.71
SSU72-203ENST00000378725 C2CD4BA6NLJ0 364 aa19.51■□□□□ 0.71
SSU72-203ENST00000378725 DLL1O00548 723 aa19.51■□□□□ 0.71
SSU72-203ENST00000378725 SCAMP3O14828 347 aaKnown RBP19.51■□□□□ 0.71
SSU72-203ENST00000378725 NFATC1O95644 943 aa19.51■□□□□ 0.71
SSU72-203ENST00000378725 LATS1O95835 1130 aa19.51■□□□□ 0.71
SSU72-203ENST00000378725 MYBL1P10243 752 aa19.51■□□□□ 0.71
SSU72-203ENST00000378725 FECHP22830 423 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms