RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 GBP5Q96PP8 586 aa14.65□□□□□ -0.06
SHROOM1-203ENST00000378679 PCYT2Q99447 389 aa14.65□□□□□ -0.06
SHROOM1-203ENST00000378679 TKTL2Q9H0I9 626 aa14.65□□□□□ -0.06
SHROOM1-203ENST00000378679 LHX5Q9H2C1 402 aa14.65□□□□□ -0.06
SHROOM1-203ENST00000378679 ABCF3Q9NUQ8 709 aa14.65□□□□□ -0.06
SHROOM1-203ENST00000378679 CDH9Q9ULB4 789 aa14.65□□□□□ -0.06
SHROOM1-203ENST00000378679 SLC45A1Q9Y2W3 748 aa14.65□□□□□ -0.06
SHROOM1-203ENST00000378679 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.65□□□□□ -0.06
SHROOM1-203ENST00000378679 E5RI56 91 aa14.65□□□□□ -0.06
SHROOM1-203ENST00000378679 ATG7O95352 703 aa14.65□□□□□ -0.06
SHROOM1-203ENST00000378679 TRUB2O95900 331 aaKnown RBP14.65□□□□□ -0.06
SHROOM1-203ENST00000378679 MMRN1Q13201 1228 aa14.65□□□□□ -0.06
SHROOM1-203ENST00000378679 ZNF177Q13360 481 aaPredicted RBP14.65□□□□□ -0.06
SHROOM1-203ENST00000378679 PRUNE1Q86TP1 453 aa14.65□□□□□ -0.06
SHROOM1-203ENST00000378679 MRPL9Q9BYD2 267 aaKnown RBP14.65□□□□□ -0.06
SHROOM1-203ENST00000378679 CHST12Q9NRB3 414 aa14.65□□□□□ -0.06
SHROOM1-203ENST00000378679 RIPK2O43353 540 aa14.64□□□□□ -0.07
SHROOM1-203ENST00000378679 SNAI1O95863 264 aaPredicted RBP14.64□□□□□ -0.07
SHROOM1-203ENST00000378679 ETS1P14921 441 aa14.64□□□□□ -0.07
SHROOM1-203ENST00000378679 SSTR1P30872 391 aa14.64□□□□□ -0.07
SHROOM1-203ENST00000378679 TUSC3Q13454 348 aa14.64□□□□□ -0.07
SHROOM1-203ENST00000378679 OLFML2BQ68BL8 750 aa14.64□□□□□ -0.07
SHROOM1-203ENST00000378679 LVRNQ6Q4G3 990 aa14.64□□□□□ -0.07
SHROOM1-203ENST00000378679 SPATA21Q7Z572 469 aa14.64□□□□□ -0.07
SHROOM1-203ENST00000378679 MYCBPAPQ8TBZ2 947 aa14.64□□□□□ -0.07
SHROOM1-203ENST00000378679 HTR3CQ8WXA8 447 aa14.64□□□□□ -0.07
SHROOM1-203ENST00000378679 MRPS31Q92665 395 aaKnown RBP14.64□□□□□ -0.07
SHROOM1-203ENST00000378679 PIH1D1Q9NWS0 290 aaKnown RBP14.64□□□□□ -0.07
SHROOM1-203ENST00000378679 SMPD4Q9NXE4 827 aa14.64□□□□□ -0.07
SHROOM1-203ENST00000378679 NOP53Q9NZM5 478 aaKnown RBP14.64□□□□□ -0.07
SHROOM1-203ENST00000378679 MORF4L1Q9UBU8 362 aa14.64□□□□□ -0.07
SHROOM1-203ENST00000378679 PCYOX1Q9UHG3 505 aa14.64□□□□□ -0.07
SHROOM1-203ENST00000378679 BCAP29Q9UHQ4 241 aa14.64□□□□□ -0.07
SHROOM1-203ENST00000378679 TSR3Q9UJK0 312 aaKnown RBP14.64□□□□□ -0.07
SHROOM1-203ENST00000378679 GRB14Q14449 540 aa14.64□□□□□ -0.07
SHROOM1-203ENST00000378679 ILDR2Q71H61 639 aa14.64□□□□□ -0.07
SHROOM1-203ENST00000378679 GRAMD1AQ96CP6 724 aa14.64□□□□□ -0.07
SHROOM1-203ENST00000378679 TLR8Q9NR97 1041 aaKnown RBP14.64□□□□□ -0.07
SHROOM1-203ENST00000378679 RBM22Q9NW64 420 aaKnown RBP eCLIP14.64□□□□□ -0.07
SHROOM1-203ENST00000378679 FLT3P36888 993 aa14.64□□□□□ -0.07
SHROOM1-203ENST00000378679 ELK3P41970 407 aa14.64□□□□□ -0.07
SHROOM1-203ENST00000378679 TBX4P57082 545 aa14.64□□□□□ -0.07
SHROOM1-203ENST00000378679 ZC3H12AQ5D1E8 599 aaKnown RBP14.64□□□□□ -0.07
SHROOM1-203ENST00000378679 NAIF1Q69YI7 327 aaPredicted RBP14.64□□□□□ -0.07
SHROOM1-203ENST00000378679 NPNTQ6UXI9 565 aa14.64□□□□□ -0.07
SHROOM1-203ENST00000378679 NAT9Q9BTE0 207 aa14.64□□□□□ -0.07
SHROOM1-203ENST00000378679 LRRC19Q9H756 370 aa14.64□□□□□ -0.07
SHROOM1-203ENST00000378679 MARCOQ9UEW3 520 aaPredicted RBP14.64□□□□□ -0.07
SHROOM1-203ENST00000378679 PMM2O15305 246 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 ERBB2P04626 1255 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 MBL2P11226 248 aaPredicted RBP14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 TUBP50607 506 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 DNAJC3Q13217 504 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 PTK6Q13882 451 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 BBS12Q6ZW61 710 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 GIPC2Q8TF65 315 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 ARHGEF38Q9NXL2 777 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 ADAMTS5Q9UNA0 930 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 FARP1Q9Y4F1 1045 aaPredicted RBP14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 H0Y626 953 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 NCAM2O15394 837 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 EDIL3O43854 480 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 OPHN1O60890 802 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 OCRLQ01968 901 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 ZNF844Q08AG5 666 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 CDH18Q13634 790 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 KDM7AQ6ZMT4 941 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 MON1BQ7L1V2 547 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 LINC00523Q86TU6 105 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 SLC4A11Q8NBS3 891 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 SEC16BQ96JE7 1060 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 RNF157Q96PX1 679 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 TUBB6Q9BUF5 446 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 TRIM4Q9C037 500 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 VCXQ9H320 206 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 ZFP69BQ9UJL9 534 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 CACNA1SQ13698 1873 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 NT5C1B-RDH14C9J2C7 533 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 PAX7P23759 505 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 POLNQ7Z5Q5 900 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 TOP6BLQ8N6T0 577 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 MYLPFQ96A32 169 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 PAFAH2Q99487 392 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 ETNK1Q9HBU6 452 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 GEMIN8Q9NWZ8 242 aaKnown RBP14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 LMCD1Q9NZU5 365 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 SLC39A10Q9ULF5 831 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 NAALADL1Q9UQQ1 740 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 CFLARO15519 480 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 LIASO43766 372 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 HAUS5O94927 633 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 LILRA4P59901 499 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 IKBKEQ14164 716 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 CAPRIN2Q6IMN6 1127 aaKnown RBP14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 CYB5D1Q6P9G0 228 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 FTHL17Q9BXU8 183 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 ERVK-5Q9HDB9 667 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 OR12D3Q9UGF7 316 aa14.63□□□□□ -0.07
SHROOM1-203ENST00000378679 GOLGA8QA0A0J9YX86 632 aa14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 GOLGA8OA6NCC3 632 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms