RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 BCAT1P54687 386 aa14.5□□□□□ -0.09
MSH5-202ENST00000375740 BCAR1P56945 870 aa14.5□□□□□ -0.09
MSH5-202ENST00000375740 PPP6R3Q5H9R7 873 aaPredicted RBP14.5□□□□□ -0.09
MSH5-202ENST00000375740 SYCP2LQ5T4T6 812 aa14.5□□□□□ -0.09
MSH5-202ENST00000375740 ARHGEF18Q6ZSZ5 1173 aa14.5□□□□□ -0.09
MSH5-202ENST00000375740 C3orf62Q6ZUJ4 267 aa14.5□□□□□ -0.09
MSH5-202ENST00000375740 SLC2A14Q8TDB8 520 aa14.5□□□□□ -0.09
MSH5-202ENST00000375740 TBCBQ99426 244 aa14.5□□□□□ -0.09
MSH5-202ENST00000375740 ADAM33Q9BZ11 813 aa14.5□□□□□ -0.09
MSH5-202ENST00000375740 MAGEB5Q9BZ81 275 aa14.5□□□□□ -0.09
MSH5-202ENST00000375740 HAO1Q9UJM8 370 aa14.5□□□□□ -0.09
MSH5-202ENST00000375740 MAP3K6O95382 1288 aa14.5□□□□□ -0.09
MSH5-202ENST00000375740 DESP17661 470 aa14.5□□□□□ -0.09
MSH5-202ENST00000375740 KRT15P19012 456 aa14.5□□□□□ -0.09
MSH5-202ENST00000375740 ATP6V1C1P21283 382 aa14.5□□□□□ -0.09
MSH5-202ENST00000375740 SP100P23497 879 aaPredicted RBP14.5□□□□□ -0.09
MSH5-202ENST00000375740 PNPLA4P41247 253 aa14.5□□□□□ -0.09
MSH5-202ENST00000375740 FOXB2Q5VYV0 432 aa14.5□□□□□ -0.09
MSH5-202ENST00000375740 FAM47EQ6ZV65 393 aa14.5□□□□□ -0.09
MSH5-202ENST00000375740 PALM2Q8IXS6 379 aa14.5□□□□□ -0.09
MSH5-202ENST00000375740 PDIK1LQ8N165 341 aa14.5□□□□□ -0.09
MSH5-202ENST00000375740 NME8Q8N427 588 aa14.5□□□□□ -0.09
MSH5-202ENST00000375740 FAM13CQ8NE31 585 aa14.5□□□□□ -0.09
MSH5-202ENST00000375740 LRRN4Q8WUT4 740 aa14.5□□□□□ -0.09
MSH5-202ENST00000375740 PHACTR1Q9C0D0 580 aa14.5□□□□□ -0.09
MSH5-202ENST00000375740 MYLK2Q9H1R3 596 aa14.5□□□□□ -0.09
MSH5-202ENST00000375740 TRABDQ9H4I3 376 aa14.5□□□□□ -0.09
MSH5-202ENST00000375740 SLC24A2Q9UI40 661 aa14.5□□□□□ -0.09
MSH5-202ENST00000375740 SMAPO00193 183 aa14.49□□□□□ -0.09
MSH5-202ENST00000375740 MDM4O15151 490 aa14.49□□□□□ -0.09
MSH5-202ENST00000375740 ENTPD5O75356 428 aa14.49□□□□□ -0.09
MSH5-202ENST00000375740 PIAS1O75925 651 aa14.49□□□□□ -0.09
MSH5-202ENST00000375740 PTPN9P43378 593 aa14.49□□□□□ -0.09
MSH5-202ENST00000375740 PTDSS1P48651 473 aaKnown RBP14.49□□□□□ -0.09
MSH5-202ENST00000375740 ZNF157P51786 506 aaPredicted RBP14.49□□□□□ -0.09
MSH5-202ENST00000375740 POLE2P56282 527 aa14.49□□□□□ -0.09
MSH5-202ENST00000375740 LILRA4P59901 499 aa14.49□□□□□ -0.09
MSH5-202ENST00000375740 LAMB3Q13751 1172 aa14.49□□□□□ -0.09
MSH5-202ENST00000375740 FSCN1Q16658 493 aaKnown RBP14.49□□□□□ -0.09
MSH5-202ENST00000375740 SV2CQ496J9 727 aa14.49□□□□□ -0.09
MSH5-202ENST00000375740 EFHC2Q5JST6 749 aa14.49□□□□□ -0.09
MSH5-202ENST00000375740 SLC9A4Q6AI14 798 aa14.49□□□□□ -0.09
MSH5-202ENST00000375740 SLC26A9Q7LBE3 791 aa14.49□□□□□ -0.09
MSH5-202ENST00000375740 LIMS2Q7Z4I7 341 aa14.49□□□□□ -0.09
MSH5-202ENST00000375740 ATP11CQ8NB49 1132 aa14.49□□□□□ -0.09
MSH5-202ENST00000375740 DRAXINQ8NBI3 349 aaPredicted RBP14.49□□□□□ -0.09
MSH5-202ENST00000375740 ITFG2Q969R8 447 aa14.49□□□□□ -0.09
MSH5-202ENST00000375740 Q9Y3F1 56 aa14.49□□□□□ -0.09
MSH5-202ENST00000375740 FAM47DPA6NHR8 397 aa14.49□□□□□ -0.09
MSH5-202ENST00000375740 KCNN4O15554 427 aa14.49□□□□□ -0.09
MSH5-202ENST00000375740 HUS1O60921 280 aa14.49□□□□□ -0.09
MSH5-202ENST00000375740 TGM2P21980 687 aa14.49□□□□□ -0.09
MSH5-202ENST00000375740 RBL1P28749 1068 aa14.49□□□□□ -0.09
MSH5-202ENST00000375740 L1CAMP32004 1257 aa14.49□□□□□ -0.09
MSH5-202ENST00000375740 PHBP35232 272 aa14.49□□□□□ -0.09
MSH5-202ENST00000375740 RPL34P49207 117 aaKnown RBP14.49□□□□□ -0.09
MSH5-202ENST00000375740 GEMIN4P57678 1058 aaKnown RBP14.49□□□□□ -0.09
MSH5-202ENST00000375740 EFTUD2Q15029 972 aaKnown RBP eCLIP14.49□□□□□ -0.099e-10■■■■■ 39.2
MSH5-202ENST00000375740 TWF2Q6IBS0 349 aaKnown RBP14.49□□□□□ -0.09
MSH5-202ENST00000375740 C17orf99Q6UX52 265 aa14.49□□□□□ -0.09
MSH5-202ENST00000375740 PPP1R21Q6ZMI0 780 aa14.49□□□□□ -0.09
MSH5-202ENST00000375740 OSTM1Q86WC4 334 aa14.49□□□□□ -0.09
MSH5-202ENST00000375740 ADGRF2Q8IZF7 708 aa14.49□□□□□ -0.09
MSH5-202ENST00000375740 FBF1Q8TES7 1133 aa14.49□□□□□ -0.09
MSH5-202ENST00000375740 CENPIQ92674 756 aaPredicted RBP14.49□□□□□ -0.09
MSH5-202ENST00000375740 EZH1Q92800 747 aaPredicted RBP14.49□□□□□ -0.09
MSH5-202ENST00000375740 TGS1Q96RS0 853 aaKnown RBP14.49□□□□□ -0.09
MSH5-202ENST00000375740 NUDCD1Q96RS6 583 aa14.49□□□□□ -0.09
MSH5-202ENST00000375740 TSPAN18Q96SJ8 248 aa14.49□□□□□ -0.09
MSH5-202ENST00000375740 C11orf84Q9BUA3 381 aaPredicted RBP14.49□□□□□ -0.09
MSH5-202ENST00000375740 KATNAL1Q9BW62 490 aa14.49□□□□□ -0.09
MSH5-202ENST00000375740 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.49□□□□□ -0.09
MSH5-202ENST00000375740 A0A1W2PPM1 405 aa14.49□□□□□ -0.09
MSH5-202ENST00000375740 DCAF8L1A6NGE4 600 aa14.49□□□□□ -0.09
MSH5-202ENST00000375740 IGFBP6P24592 240 aaPredicted RBP14.49□□□□□ -0.09
MSH5-202ENST00000375740 RGS2P41220 211 aa14.49□□□□□ -0.09
MSH5-202ENST00000375740 WDR4P57081 412 aaKnown RBP14.49□□□□□ -0.09
MSH5-202ENST00000375740 PURAQ00577 322 aaKnown RBP14.49□□□□□ -0.09
MSH5-202ENST00000375740 RASAL3Q86YV0 1011 aa14.49□□□□□ -0.09
MSH5-202ENST00000375740 IGDCC3Q8IVU1 814 aa14.49□□□□□ -0.09
MSH5-202ENST00000375740 NDRG1Q92597 394 aaKnown RBP14.49□□□□□ -0.09
MSH5-202ENST00000375740 FAF2Q96CS3 445 aa14.49□□□□□ -0.09
MSH5-202ENST00000375740 DHX35Q9H5Z1 703 aaKnown RBP14.49□□□□□ -0.09
MSH5-202ENST00000375740 PCMTD2Q9NV79 361 aa14.49□□□□□ -0.09
MSH5-202ENST00000375740 CYP2F1P24903 491 aa14.48□□□□□ -0.09
MSH5-202ENST00000375740 TKTP29401 623 aaKnown RBP14.48□□□□□ -0.09
MSH5-202ENST00000375740 MRPS35P82673 323 aaKnown RBP14.48□□□□□ -0.09
MSH5-202ENST00000375740 KCNJ11Q14654 390 aa14.48□□□□□ -0.09
MSH5-202ENST00000375740 LMNTD2Q8IXW0 634 aa14.48□□□□□ -0.09
MSH5-202ENST00000375740 C4orf33Q8N1A6 199 aa14.48□□□□□ -0.09
MSH5-202ENST00000375740 MAGEB18Q96M61 343 aa14.48□□□□□ -0.09
MSH5-202ENST00000375740 PAIP2Q9BPZ3 127 aaKnown RBP14.48□□□□□ -0.09
MSH5-202ENST00000375740 ZNF670Q9BS34 389 aa14.48□□□□□ -0.09
MSH5-202ENST00000375740 NRDE2Q9H7Z3 1164 aa14.48□□□□□ -0.09
MSH5-202ENST00000375740 PPCSQ9HAB8 311 aa14.48□□□□□ -0.09
MSH5-202ENST00000375740 RAB6BQ9NRW1 208 aa14.48□□□□□ -0.09
MSH5-202ENST00000375740 KLHL14Q9P2G3 628 aa14.48□□□□□ -0.09
MSH5-202ENST00000375740 PSMC3IPQ9P2W1 217 aaPredicted RBP14.48□□□□□ -0.09
MSH5-202ENST00000375740 CHMP2BQ9UQN3 213 aa14.48□□□□□ -0.09
MSH5-202ENST00000375740 MANSC4A6NHS7 340 aaPredicted RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 283.1 ms