RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 KCND2Q9NZV8 630 aa20.34■□□□□ 0.85
COL15A1-201ENST00000375001 PRR12Q9ULL5 1215 aa20.34■□□□□ 0.85
COL15A1-201ENST00000375001 TRAPPC3O43617 180 aa20.33■□□□□ 0.85
COL15A1-201ENST00000375001 DGAT1O75907 488 aa20.33■□□□□ 0.85
COL15A1-201ENST00000375001 RFX3P48380 749 aa20.33■□□□□ 0.85
COL15A1-201ENST00000375001 CASP4P49662 377 aa20.33■□□□□ 0.85
COL15A1-201ENST00000375001 MRPS22P82650 360 aaKnown RBP20.33■□□□□ 0.85
COL15A1-201ENST00000375001 BOLA3Q53S33 107 aa20.33■□□□□ 0.85
COL15A1-201ENST00000375001 TTC27Q6P3X3 843 aa20.33■□□□□ 0.85
COL15A1-201ENST00000375001 RTKN2Q8IZC4 609 aa20.33■□□□□ 0.85
COL15A1-201ENST00000375001 CACTIN-AS1Q8N1I8 211 aa20.33■□□□□ 0.85
COL15A1-201ENST00000375001 TTLL6Q8N841 843 aa20.33■□□□□ 0.85
COL15A1-201ENST00000375001 TIPINQ9BVW5 301 aa20.33■□□□□ 0.85
COL15A1-201ENST00000375001 COMMD3-BMI1R4GMX3 469 aa20.33■□□□□ 0.85
COL15A1-201ENST00000375001 SGPL1O95470 568 aa20.33■□□□□ 0.85
COL15A1-201ENST00000375001 ITGA9Q13797 1035 aa20.33■□□□□ 0.85
COL15A1-201ENST00000375001 TMEM132DQ14C87 1099 aa20.33■□□□□ 0.85
COL15A1-201ENST00000375001 CYP4Z1Q86W10 505 aa20.33■□□□□ 0.85
COL15A1-201ENST00000375001 CCNJLQ8IV13 435 aa20.33■□□□□ 0.85
COL15A1-201ENST00000375001 MTMR8Q96EF0 704 aa20.33■□□□□ 0.85
COL15A1-201ENST00000375001 NT5C1AQ9BXI3 368 aa20.33■□□□□ 0.85
COL15A1-201ENST00000375001 CATSPERBQ9H7T0 1116 aa20.33■□□□□ 0.85
COL15A1-201ENST00000375001 PTPRHQ9HD43 1115 aa20.33■□□□□ 0.85
COL15A1-201ENST00000375001 PROCP04070 461 aa20.33■□□□□ 0.85
COL15A1-201ENST00000375001 PTDSS1P48651 473 aaKnown RBP20.33■□□□□ 0.85
COL15A1-201ENST00000375001 HK2P52789 917 aa20.33■□□□□ 0.85
COL15A1-201ENST00000375001 HIST2H2ACQ16777 129 aaPredicted RBP20.33■□□□□ 0.85
COL15A1-201ENST00000375001 HIST2H2AA3Q6FI13 130 aa20.33■□□□□ 0.85
COL15A1-201ENST00000375001 MARK2Q7KZI7 788 aaKnown RBP20.33■□□□□ 0.85
COL15A1-201ENST00000375001 TBC1D16Q8TBP0 767 aa20.33■□□□□ 0.85
COL15A1-201ENST00000375001 MUC3BQ9H195 1237 aa20.33■□□□□ 0.85
COL15A1-201ENST00000375001 AGPAT3Q9NRZ7 376 aa20.33■□□□□ 0.85
COL15A1-201ENST00000375001 UBA2Q9UBT2 640 aaPredicted RBP20.33■□□□□ 0.85
COL15A1-201ENST00000375001 VAV3Q9UKW4 847 aa20.33■□□□□ 0.85
COL15A1-201ENST00000375001 SLC26A4O43511 780 aa20.33■□□□□ 0.84
COL15A1-201ENST00000375001 ETS2P15036 469 aa20.33■□□□□ 0.84
COL15A1-201ENST00000375001 JAK1P23458 1154 aa20.33■□□□□ 0.84
COL15A1-201ENST00000375001 SLC20A2Q08357 652 aa20.33■□□□□ 0.84
COL15A1-201ENST00000375001 TBX2Q13207 712 aaPredicted RBP20.33■□□□□ 0.84
COL15A1-201ENST00000375001 ZNF284Q2VY69 593 aa20.33■□□□□ 0.84
COL15A1-201ENST00000375001 KIAA0408Q6ZU52 694 aa20.33■□□□□ 0.84
COL15A1-201ENST00000375001 B3GALNT2Q8NCR0 500 aa20.33■□□□□ 0.84
COL15A1-201ENST00000375001 KAT2BQ92831 832 aa20.33■□□□□ 0.84
COL15A1-201ENST00000375001 RUSC1Q9BVN2 902 aa20.33■□□□□ 0.84
COL15A1-201ENST00000375001 AGXT2Q9BYV1 514 aa20.33■□□□□ 0.84
COL15A1-201ENST00000375001 UNKQ9C0B0 810 aaKnown RBP20.33■□□□□ 0.84
COL15A1-201ENST00000375001 LOC100506127A0A0U1RQW1 187 aa20.33■□□□□ 0.84
COL15A1-201ENST00000375001 ANXA9O76027 345 aa20.33■□□□□ 0.84
COL15A1-201ENST00000375001 CAMTA2O94983 1202 aa20.33■□□□□ 0.84
COL15A1-201ENST00000375001 ABCB1P08183 1280 aaPredicted RBP20.33■□□□□ 0.84
COL15A1-201ENST00000375001 ARHGEF7Q14155 803 aa20.33■□□□□ 0.84
COL15A1-201ENST00000375001 KRT74Q7RTS7 529 aa20.33■□□□□ 0.84
COL15A1-201ENST00000375001 FBXO33Q7Z6M2 555 aa20.33■□□□□ 0.84
COL15A1-201ENST00000375001 SETD9Q8NE22 299 aa20.33■□□□□ 0.84
COL15A1-201ENST00000375001 C9orf16Q9BUW7 83 aa20.33■□□□□ 0.84
COL15A1-201ENST00000375001 ACOT9Q9Y305 439 aa20.33■□□□□ 0.84
COL15A1-201ENST00000375001 GMEB1Q9Y692 573 aa20.33■□□□□ 0.84
COL15A1-201ENST00000375001 ITGA4P13612 1032 aa20.32■□□□□ 0.84
COL15A1-201ENST00000375001 MTTPP55157 894 aa20.32■□□□□ 0.84
COL15A1-201ENST00000375001 RNF19BQ6ZMZ0 732 aa20.32■□□□□ 0.84
COL15A1-201ENST00000375001 ZBTB46Q86UZ6 589 aa20.32■□□□□ 0.84
COL15A1-201ENST00000375001 IZUMO1Q8IYV9 350 aa20.32■□□□□ 0.84
COL15A1-201ENST00000375001 BLOC1S5Q8TDH9 187 aa20.32■□□□□ 0.84
COL15A1-201ENST00000375001 P4HA2O15460 535 aa20.32■□□□□ 0.84
COL15A1-201ENST00000375001 MYCP01106 439 aaPredicted RBP20.32■□□□□ 0.84
COL15A1-201ENST00000375001 ITGA1P56199 1179 aa20.32■□□□□ 0.84
COL15A1-201ENST00000375001 SFSWAPQ12872 951 aaKnown RBP20.32■□□□□ 0.84
COL15A1-201ENST00000375001 CSHL1Q14406 222 aa20.32■□□□□ 0.84
COL15A1-201ENST00000375001 TTLL4Q14679 1199 aa20.32■□□□□ 0.84
COL15A1-201ENST00000375001 ZNF571Q7Z3V5 609 aaPredicted RBP20.32■□□□□ 0.84
COL15A1-201ENST00000375001 TMC3Q7Z5M5 1100 aa20.32■□□□□ 0.84
COL15A1-201ENST00000375001 PPP1R14BQ96C90 147 aa20.32■□□□□ 0.84
COL15A1-201ENST00000375001 GPRASP2Q96D09 838 aa20.32■□□□□ 0.84
COL15A1-201ENST00000375001 BTN3A3O00478 584 aa20.32■□□□□ 0.84
COL15A1-201ENST00000375001 CCNIQ14094 377 aa20.32■□□□□ 0.84
COL15A1-201ENST00000375001 TFDP3Q5H9I0 405 aa20.32■□□□□ 0.84
COL15A1-201ENST00000375001 ATAD3BQ5T9A4 648 aa20.32■□□□□ 0.84
COL15A1-201ENST00000375001 N4BP2L1Q5TBK1 243 aaPredicted RBP20.32■□□□□ 0.84
COL15A1-201ENST00000375001 MMADHCQ9H3L0 296 aaPredicted RBP20.32■□□□□ 0.84
COL15A1-201ENST00000375001 TNS3Q68CZ2 1445 aa20.32■□□□□ 0.84
COL15A1-201ENST00000375001 PIK3CDO00329 1044 aa20.32■□□□□ 0.84
COL15A1-201ENST00000375001 OPLAHO14841 1288 aa20.32■□□□□ 0.84
COL15A1-201ENST00000375001 FYNP06241 537 aa20.32■□□□□ 0.84
COL15A1-201ENST00000375001 SNX32Q86XE0 403 aa20.32■□□□□ 0.84
COL15A1-201ENST00000375001 LRRC49Q8IUZ0 686 aa20.32■□□□□ 0.84
COL15A1-201ENST00000375001 DDX50Q9BQ39 737 aaKnown RBP20.32■□□□□ 0.84
COL15A1-201ENST00000375001 ACAD9Q9H845 621 aa20.32■□□□□ 0.84
COL15A1-201ENST00000375001 SAR1AQ9NR31 198 aa20.32■□□□□ 0.84
COL15A1-201ENST00000375001 NYAP2Q9P242 653 aa20.32■□□□□ 0.84
COL15A1-201ENST00000375001 CRLS1Q9UJA2 301 aa20.32■□□□□ 0.84
COL15A1-201ENST00000375001 GPC1P35052 558 aa20.31■□□□□ 0.84
COL15A1-201ENST00000375001 GOLGA7BQ2TAP0 167 aa20.31■□□□□ 0.84
COL15A1-201ENST00000375001 MRNIPQ6NTE8 343 aa20.31■□□□□ 0.84
COL15A1-201ENST00000375001 TSPAN14Q8NG11 270 aa20.31■□□□□ 0.84
COL15A1-201ENST00000375001 SPPL2AQ8TCT8 520 aa20.31■□□□□ 0.84
COL15A1-201ENST00000375001 KRCC1Q9NPI7 259 aaPredicted RBP20.31■□□□□ 0.84
COL15A1-201ENST00000375001 GLRA4Q5JXX5 417 aa20.31■□□□□ 0.84
COL15A1-201ENST00000375001 GIPC3Q8TF64 312 aa20.31■□□□□ 0.84
COL15A1-201ENST00000375001 NACC2Q96BF6 587 aa20.31■□□□□ 0.84
COL15A1-201ENST00000375001 LRRC40Q9H9A6 602 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms