RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 ZNF577Q9BSK1 485 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 TASP1Q9H6P5 420 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 LRRC19Q9H756 370 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 PPCSQ9HAB8 311 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 STMN3Q9NZ72 180 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 CCDC167Q9P0B6 97 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 A6NL46 340 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 CENPXA8MT69 81 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 SLC26A4O43511 780 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 ITM2AO43736 263 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 WBP4O75554 376 aaKnown RBP12.13□□□□□ -0.47
PTPN1-201ENST00000371621 WDR47O94967 919 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 COX4I1P13073 169 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 CRABP2P29373 138 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 NT5C2P49902 561 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 CTC1Q2NKJ3 1217 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 ARHGEF19Q8IW93 802 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 C12orf43Q96C57 262 aaKnown RBP12.13□□□□□ -0.47
PTPN1-201ENST00000371621 EIF2AK1Q9BQI3 630 aaKnown RBP12.13□□□□□ -0.47
PTPN1-201ENST00000371621 MMTAG2Q9BU76 263 aaKnown RBP12.13□□□□□ -0.47
PTPN1-201ENST00000371621 TMEM206Q9H813 350 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 WDR41Q9HAD4 459 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 USP29Q9HBJ7 922 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 PTPRHQ9HD43 1115 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 WDR6Q9NNW5 1121 aaKnown RBP12.13□□□□□ -0.47
PTPN1-201ENST00000371621 ENTPD7Q9NQZ7 604 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 PNPLA3Q9NST1 481 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 C6orf203Q9P0P8 240 aaPredicted RBP12.13□□□□□ -0.47
PTPN1-201ENST00000371621 COPG2Q9UBF2 871 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 ECE2O60344 883 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 AVILO75366 819 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 TIPRLO75663 272 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 GLRA2P23416 452 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 GRIA3P42263 894 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 DMP1Q13316 513 aaPredicted RBP12.13□□□□□ -0.47
PTPN1-201ENST00000371621 PARP10Q53GL7 1025 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 MFSD14BQ5SR56 506 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 SLFN13Q68D06 897 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 DPY19L2Q6NUT2 758 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 TMEM26Q6ZUK4 368 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 ADGRA1Q86SQ6 560 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 TTC30AQ86WT1 665 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 LRRN4Q8WUT4 740 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 RCN3Q96D15 328 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 TRIM15Q9C019 465 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 GPAMQ9HCL2 828 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 COQ3Q9NZJ6 369 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 CEMIPQ8WUJ3 1361 aa12.13□□□□□ -0.47
PTPN1-201ENST00000371621 LRRIQ4A6NIV6 560 aa12.12□□□□□ -0.47
PTPN1-201ENST00000371621 PHC1P78364 1004 aa12.12□□□□□ -0.47
PTPN1-201ENST00000371621 OR6B2Q6IFH4 312 aa12.12□□□□□ -0.47
PTPN1-201ENST00000371621 CLIP4Q8N3C7 705 aa12.12□□□□□ -0.47
PTPN1-201ENST00000371621 BTBD9Q96Q07 612 aa12.12□□□□□ -0.47
PTPN1-201ENST00000371621 ILKAPQ9H0C8 392 aaPredicted RBP12.12□□□□□ -0.47
PTPN1-201ENST00000371621 EPS8L2Q9H6S3 715 aa12.12□□□□□ -0.47
PTPN1-201ENST00000371621 JMJD4Q9H9V9 463 aa12.12□□□□□ -0.47
PTPN1-201ENST00000371621 MRPL40Q9NQ50 206 aaKnown RBP12.12□□□□□ -0.47
PTPN1-201ENST00000371621 POLE4Q9NR33 117 aa12.12□□□□□ -0.47
PTPN1-201ENST00000371621 PNMA8BQ9ULN7 279 aaPredicted RBP12.12□□□□□ -0.47
PTPN1-201ENST00000371621 PNMA6FA0A0J9YX94 578 aa12.12□□□□□ -0.47
PTPN1-201ENST00000371621 INPP4BO15327 924 aa12.12□□□□□ -0.47
PTPN1-201ENST00000371621 SORBS2O94875 1100 aaKnown RBP12.12□□□□□ -0.47
PTPN1-201ENST00000371621 SERPINA6P08185 405 aa12.12□□□□□ -0.47
PTPN1-201ENST00000371621 PCSK6P29122 969 aa12.12□□□□□ -0.47
PTPN1-201ENST00000371621 EPHA3P29320 983 aa12.12□□□□□ -0.47
PTPN1-201ENST00000371621 PPP2R2DQ66LE6 453 aa12.12□□□□□ -0.47
PTPN1-201ENST00000371621 ACAD10Q6JQN1 1059 aa12.12□□□□□ -0.47
PTPN1-201ENST00000371621 CGB2Q6NT52 195 aa12.12□□□□□ -0.47
PTPN1-201ENST00000371621 DHRSXQ8N5I4 330 aa12.12□□□□□ -0.47
PTPN1-201ENST00000371621 SEC14L1Q92503 715 aa12.12□□□□□ -0.47
PTPN1-201ENST00000371621 ISCA1Q9BUE6 129 aa12.12□□□□□ -0.47
PTPN1-201ENST00000371621 STK24Q9Y6E0 443 aa12.12□□□□□ -0.47
PTPN1-201ENST00000371621 TSPAN4O14817 238 aa12.12□□□□□ -0.47
PTPN1-201ENST00000371621 RGL2O15211 777 aa12.12□□□□□ -0.47
PTPN1-201ENST00000371621 GRAP2O75791 330 aa12.12□□□□□ -0.47
PTPN1-201ENST00000371621 MT-ND1P03886 318 aa12.12□□□□□ -0.47
PTPN1-201ENST00000371621 FYNP06241 537 aa12.12□□□□□ -0.47
PTPN1-201ENST00000371621 MYCLP1P12525 358 aaPredicted RBP12.12□□□□□ -0.47
PTPN1-201ENST00000371621 TFAMQ00059 246 aaKnown RBP12.12□□□□□ -0.47
PTPN1-201ENST00000371621 TAF12Q16514 161 aa12.12□□□□□ -0.47
PTPN1-201ENST00000371621 AGKQ53H12 422 aa12.12□□□□□ -0.47
PTPN1-201ENST00000371621 PLEKHG4Q58EX7 1191 aa12.12□□□□□ -0.47
PTPN1-201ENST00000371621 ZFP1Q6P2D0 407 aa12.12□□□□□ -0.47
PTPN1-201ENST00000371621 USP31Q70CQ4 1352 aa12.12□□□□□ -0.47
PTPN1-201ENST00000371621 KIFC3Q9BVG8 833 aa12.12□□□□□ -0.47
PTPN1-201ENST00000371621 WDR55Q9H6Y2 383 aaPredicted RBP12.12□□□□□ -0.47
PTPN1-201ENST00000371621 AGPAT3Q9NRZ7 376 aa12.12□□□□□ -0.47
PTPN1-201ENST00000371621 PARVAQ9NVD7 372 aa12.12□□□□□ -0.47
PTPN1-201ENST00000371621 SLC16A3O15427 465 aaKnown RBP12.11□□□□□ -0.47
PTPN1-201ENST00000371621 SEC24AO95486 1093 aa12.11□□□□□ -0.47
PTPN1-201ENST00000371621 NADKO95544 446 aaPredicted RBP12.11□□□□□ -0.47
PTPN1-201ENST00000371621 P4HBP07237 508 aaKnown RBP12.11□□□□□ -0.47
PTPN1-201ENST00000371621 MOGSQ13724 837 aa12.11□□□□□ -0.47
PTPN1-201ENST00000371621 KRT72Q14CN4 511 aa12.11□□□□□ -0.47
PTPN1-201ENST00000371621 CYP4A22Q5TCH4 519 aa12.11□□□□□ -0.47
PTPN1-201ENST00000371621 DUS1LQ6P1R4 473 aaKnown RBP12.11□□□□□ -0.47
PTPN1-201ENST00000371621 CBWD1Q9BRT8 395 aa12.11□□□□□ -0.47
PTPN1-201ENST00000371621 AMNQ9BXJ7 453 aa12.11□□□□□ -0.47
PTPN1-201ENST00000371621 IRF2BPLQ9H1B7 796 aa12.11□□□□□ -0.47
PTPN1-201ENST00000371621 STN1Q9H668 368 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms