RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 UBLCP1Q8WVY7 318 aaPredicted RBP18.21■□□□□ 0.51
SSBP3-203ENST00000371319 P3H4Q92791 437 aa18.21■□□□□ 0.51
SSBP3-203ENST00000371319 NTAN1Q96AB6 310 aa18.21■□□□□ 0.51
SSBP3-203ENST00000371319 CSPG4P5Q96PW8 444 aa18.21■□□□□ 0.51
SSBP3-203ENST00000371319 SLC9A7Q96T83 725 aa18.21■□□□□ 0.51
SSBP3-203ENST00000371319 EPB41L4BQ9H329 900 aa18.21■□□□□ 0.51
SSBP3-203ENST00000371319 CWC15Q9P013 229 aaKnown RBP18.21■□□□□ 0.51
SSBP3-203ENST00000371319 ANAPC5Q9UJX4 755 aa18.21■□□□□ 0.51
SSBP3-203ENST00000371319 PLAAQ9Y263 795 aa18.21■□□□□ 0.51
SSBP3-203ENST00000371319 ATP8A1Q9Y2Q0 1164 aa18.21■□□□□ 0.51
SSBP3-203ENST00000371319 NFS1Q9Y697 457 aa18.21■□□□□ 0.51
SSBP3-203ENST00000371319 DNALI1O14645 258 aaPredicted RBP18.21■□□□□ 0.51
SSBP3-203ENST00000371319 VNN2O95498 520 aa18.21■□□□□ 0.51
SSBP3-203ENST00000371319 TIMP1P01033 207 aa18.21■□□□□ 0.51
SSBP3-203ENST00000371319 RBP3P10745 1247 aa18.21■□□□□ 0.51
SSBP3-203ENST00000371319 LBX1P52954 281 aa18.21■□□□□ 0.51
SSBP3-203ENST00000371319 PMS2P54278 862 aa18.21■□□□□ 0.51
SSBP3-203ENST00000371319 P3H1Q32P28 736 aa18.21■□□□□ 0.51
SSBP3-203ENST00000371319 HIBCHQ6NVY1 386 aaPredicted RBP18.21■□□□□ 0.51
SSBP3-203ENST00000371319 LRIG3Q6UXM1 1119 aa18.21■□□□□ 0.51
SSBP3-203ENST00000371319 UNC45BQ8IWX7 931 aa18.21■□□□□ 0.51
SSBP3-203ENST00000371319 PGLYRP2Q96PD5 576 aa18.21■□□□□ 0.51
SSBP3-203ENST00000371319 ADAM7Q9H2U9 754 aa18.21■□□□□ 0.51
SSBP3-203ENST00000371319 ANLNQ9NQW6 1124 aa18.21■□□□□ 0.51
SSBP3-203ENST00000371319 RCOR3Q9P2K3 495 aaPredicted RBP18.21■□□□□ 0.51
SSBP3-203ENST00000371319 ABHD14A-ACY1A0A1B0GW23 586 aa18.2■□□□□ 0.5
SSBP3-203ENST00000371319 H7C4K7 107 aa18.2■□□□□ 0.5
SSBP3-203ENST00000371319 TRIM66O15016 1216 aa18.2■□□□□ 0.5
SSBP3-203ENST00000371319 KIAA0355O15063 1070 aa18.2■□□□□ 0.5
SSBP3-203ENST00000371319 GOT1P17174 413 aa18.2■□□□□ 0.5
SSBP3-203ENST00000371319 CHKAP35790 457 aa18.2■□□□□ 0.5
SSBP3-203ENST00000371319 PGFP49763 221 aa18.2■□□□□ 0.5
SSBP3-203ENST00000371319 YWHAGP61981 247 aaKnown RBP eCLIP18.2■□□□□ 0.5
SSBP3-203ENST00000371319 ROR1Q01973 937 aa18.2■□□□□ 0.5
SSBP3-203ENST00000371319 SCAPQ12770 1279 aa18.2■□□□□ 0.5
SSBP3-203ENST00000371319 HSP90B2PQ58FF3 399 aa18.2■□□□□ 0.5
SSBP3-203ENST00000371319 SDHAF4Q5VUM1 108 aa18.2■□□□□ 0.5
SSBP3-203ENST00000371319 SCD5Q86SK9 330 aa18.2■□□□□ 0.5
SSBP3-203ENST00000371319 TAC4Q86UU9 113 aa18.2■□□□□ 0.5
SSBP3-203ENST00000371319 TTC9BQ8N6N2 239 aa18.2■□□□□ 0.5
SSBP3-203ENST00000371319 DQX1Q8TE96 717 aaKnown RBP18.2■□□□□ 0.5
SSBP3-203ENST00000371319 TTPALQ9BTX7 342 aa18.2■□□□□ 0.5
SSBP3-203ENST00000371319 VN1R3Q9BXE9 311 aa18.2■□□□□ 0.5
SSBP3-203ENST00000371319 FAM204AQ9H8W3 233 aa18.2■□□□□ 0.5
SSBP3-203ENST00000371319 DDIT4Q9NX09 232 aa18.2■□□□□ 0.5
SSBP3-203ENST00000371319 FBXW11Q9UKB1 542 aa18.2■□□□□ 0.5
SSBP3-203ENST00000371319 MTMR11A4FU01 709 aa18.19■□□□□ 0.5
SSBP3-203ENST00000371319 I6L893 689 aaPredicted RBP18.19■□□□□ 0.5
SSBP3-203ENST00000371319 IGLV3-25P01717 112 aa18.19■□□□□ 0.5
SSBP3-203ENST00000371319 AMHP03971 560 aa18.19■□□□□ 0.5
SSBP3-203ENST00000371319 ZFXP17010 805 aaPredicted RBP18.19■□□□□ 0.5
SSBP3-203ENST00000371319 AMPD1P23109 780 aa18.19■□□□□ 0.5
SSBP3-203ENST00000371319 ADRA1BP35368 520 aa18.19■□□□□ 0.5
SSBP3-203ENST00000371319 CXCR3P49682 368 aa18.19■□□□□ 0.5
SSBP3-203ENST00000371319 AIF1P55008 147 aa18.19■□□□□ 0.5
SSBP3-203ENST00000371319 IFRD2Q12894 506 aaPredicted RBP18.19■□□□□ 0.5
SSBP3-203ENST00000371319 GPS1Q13098 491 aa18.19■□□□□ 0.5
SSBP3-203ENST00000371319 GPR17Q13304 367 aa18.19■□□□□ 0.5
SSBP3-203ENST00000371319 DDR2Q16832 855 aa18.19■□□□□ 0.5
SSBP3-203ENST00000371319 NCBP2-AS2Q69YL0 99 aa18.19■□□□□ 0.5
SSBP3-203ENST00000371319 B4GALNT4Q76KP1 1039 aa18.19■□□□□ 0.5
SSBP3-203ENST00000371319 RNF168Q8IYW5 571 aaPredicted RBP18.19■□□□□ 0.5
SSBP3-203ENST00000371319 ATAD1Q8NBU5 361 aa18.19■□□□□ 0.5
SSBP3-203ENST00000371319 STKLD1Q8NE28 680 aa18.19■□□□□ 0.5
SSBP3-203ENST00000371319 RNF139Q8WU17 664 aa18.19■□□□□ 0.5
SSBP3-203ENST00000371319 RSAD2Q8WXG1 361 aa18.19■□□□□ 0.5
SSBP3-203ENST00000371319 TOP1MTQ969P6 601 aa18.19■□□□□ 0.5
SSBP3-203ENST00000371319 ZNF689Q96CS4 500 aaPredicted RBP18.19■□□□□ 0.5
SSBP3-203ENST00000371319 TRIM62Q9BVG3 475 aa18.19■□□□□ 0.5
SSBP3-203ENST00000371319 POLR3GO15318 223 aaPredicted RBP18.18■□□□□ 0.5
SSBP3-203ENST00000371319 OPA1O60313 960 aa18.18■□□□□ 0.5
SSBP3-203ENST00000371319 F9P00740 461 aa18.18■□□□□ 0.5
SSBP3-203ENST00000371319 IFNB1P01574 187 aa18.18■□□□□ 0.5
SSBP3-203ENST00000371319 RARGP13631 454 aa18.18■□□□□ 0.5
SSBP3-203ENST00000371319 CSF2RAP15509 400 aa18.18■□□□□ 0.5
SSBP3-203ENST00000371319 RPL22P35268 128 aaKnown RBP18.18■□□□□ 0.5
SSBP3-203ENST00000371319 ARL4AP40617 200 aa18.18■□□□□ 0.5
SSBP3-203ENST00000371319 ARPP19P56211 112 aa18.18■□□□□ 0.5
SSBP3-203ENST00000371319 DEFB103AP81534 67 aa18.18■□□□□ 0.5
SSBP3-203ENST00000371319 EIF4EBP2Q13542 120 aaPredicted RBP18.18■□□□□ 0.5
SSBP3-203ENST00000371319 SLMAPQ14BN4 828 aa18.18■□□□□ 0.5
SSBP3-203ENST00000371319 EFHC2Q5JST6 749 aa18.18■□□□□ 0.5
SSBP3-203ENST00000371319 UBAP2Q5T6F2 1119 aaKnown RBP18.18■□□□□ 0.5
SSBP3-203ENST00000371319 DARS2Q6PI48 645 aaKnown RBP18.18■□□□□ 0.5
SSBP3-203ENST00000371319 PRSS55Q6UWB4 352 aaPredicted RBP18.18■□□□□ 0.5
SSBP3-203ENST00000371319 RNF19BQ6ZMZ0 732 aa18.18■□□□□ 0.5
SSBP3-203ENST00000371319 ANKS3Q6ZW76 656 aa18.18■□□□□ 0.5
SSBP3-203ENST00000371319 ZC3H18Q86VM9 953 aaKnown RBP18.18■□□□□ 0.5
SSBP3-203ENST00000371319 NUP93Q8N1F7 819 aa18.18■□□□□ 0.5
SSBP3-203ENST00000371319 FAM71DQ8N9W8 422 aa18.18■□□□□ 0.5
SSBP3-203ENST00000371319 RUFY1Q96T51 708 aa18.18■□□□□ 0.5
SSBP3-203ENST00000371319 OXCT2Q9BYC2 517 aaPredicted RBP18.18■□□□□ 0.5
SSBP3-203ENST00000371319 NMUR1Q9HB89 426 aa18.18■□□□□ 0.5
SSBP3-203ENST00000371319 RC3H2Q9HBD1 1191 aaKnown RBP18.18■□□□□ 0.5
SSBP3-203ENST00000371319 PRDM5Q9NQX1 630 aaPredicted RBP18.18■□□□□ 0.5
SSBP3-203ENST00000371319 ETNK2Q9NVF9 386 aa18.18■□□□□ 0.5
SSBP3-203ENST00000371319 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.18■□□□□ 0.52e-8■■■■■ 28.7
SSBP3-203ENST00000371319 IL37Q9NZH6 218 aa18.18■□□□□ 0.5
SSBP3-203ENST00000371319 TPX2Q9ULW0 747 aaKnown RBP18.18■□□□□ 0.5
SSBP3-203ENST00000371319 SCML2Q9UQR0 700 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms