RNA–Protein interactions for RNA: ENST00000371248.3

VPS37B-202, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-202ENST00000371248 CEBPBP17676 345 aa18.38■□□□□ 0.53
VPS37B-202ENST00000371248 HDCP19113 662 aa18.38■□□□□ 0.53
VPS37B-202ENST00000371248 KCNA5P22460 613 aa18.38■□□□□ 0.53
VPS37B-202ENST00000371248 FSHRP23945 695 aa18.38■□□□□ 0.53
VPS37B-202ENST00000371248 IFI16Q16666 785 aaKnown RBP18.38■□□□□ 0.53
VPS37B-202ENST00000371248 MIB1Q86YT6 1006 aa18.38■□□□□ 0.53
VPS37B-202ENST00000371248 ARL14EPQ8N8R7 260 aaPredicted RBP18.38■□□□□ 0.53
VPS37B-202ENST00000371248 SMRP1Q8NCR6 262 aa18.38■□□□□ 0.53
VPS37B-202ENST00000371248 RIPOR3Q96MK2 946 aa18.38■□□□□ 0.53
VPS37B-202ENST00000371248 SLC22A12Q96S37 553 aa18.38■□□□□ 0.53
VPS37B-202ENST00000371248 SLC46A2Q9BY10 475 aa18.38■□□□□ 0.53
VPS37B-202ENST00000371248 COX16Q9P0S2 106 aa18.38■□□□□ 0.53
VPS37B-202ENST00000371248 RASAL2Q9UJF2 1139 aa18.38■□□□□ 0.53
VPS37B-202ENST00000371248 CLUHO75153 1309 aa18.38■□□□□ 0.53
VPS37B-202ENST00000371248 BUB1BO60566 1050 aaPredicted RBP18.37■□□□□ 0.53
VPS37B-202ENST00000371248 NME3Q13232 169 aa18.37■□□□□ 0.53
VPS37B-202ENST00000371248 PIGHQ14442 188 aaPredicted RBP18.37■□□□□ 0.53
VPS37B-202ENST00000371248 CBX2Q14781 532 aaPredicted RBP18.37■□□□□ 0.53
VPS37B-202ENST00000371248 MSANTD2Q6P1R3 559 aa18.37■□□□□ 0.53
VPS37B-202ENST00000371248 TAC4Q86UU9 113 aa18.37■□□□□ 0.53
VPS37B-202ENST00000371248 FAM172AQ8WUF8 416 aa18.37■□□□□ 0.53
VPS37B-202ENST00000371248 CALR3Q96L12 384 aaKnown RBP18.37■□□□□ 0.53
VPS37B-202ENST00000371248 IRX2Q9BZI1 471 aaPredicted RBP18.37■□□□□ 0.53
VPS37B-202ENST00000371248 SMOC2Q9H3U7 446 aa18.37■□□□□ 0.53
VPS37B-202ENST00000371248 SLITRK6Q9H5Y7 841 aa18.37■□□□□ 0.53
VPS37B-202ENST00000371248 FAM204AQ9H8W3 233 aa18.37■□□□□ 0.53
VPS37B-202ENST00000371248 KCND1Q9NSA2 647 aa18.37■□□□□ 0.53
VPS37B-202ENST00000371248 MARCH2Q9P0N8 246 aa18.37■□□□□ 0.53
VPS37B-202ENST00000371248 CALCOCO1Q9P1Z2 691 aa18.37■□□□□ 0.53
VPS37B-202ENST00000371248 DNMT3LQ9UJW3 386 aa18.37■□□□□ 0.53
VPS37B-202ENST00000371248 USTQ9Y2C2 406 aa18.37■□□□□ 0.53
VPS37B-202ENST00000371248 PRUNE2Q8WUY3 3088 aa18.37■□□□□ 0.53
VPS37B-202ENST00000371248 GOLGA6L9A6NEM1 432 aa18.37■□□□□ 0.53
VPS37B-202ENST00000371248 PROSCO94903 275 aa18.37■□□□□ 0.53
VPS37B-202ENST00000371248 DESP17661 470 aa18.37■□□□□ 0.53
VPS37B-202ENST00000371248 DDX6P26196 483 aaKnown RBP eCLIP18.37■□□□□ 0.53
VPS37B-202ENST00000371248 MTHFRP42898 656 aa18.37■□□□□ 0.53
VPS37B-202ENST00000371248 RAB6CQ53S08 254 aa18.37■□□□□ 0.53
VPS37B-202ENST00000371248 OTUD1Q5VV17 481 aaPredicted RBP18.37■□□□□ 0.53
VPS37B-202ENST00000371248 DAB2IPQ5VWQ8 1189 aa18.37■□□□□ 0.53
VPS37B-202ENST00000371248 KLHDC10Q6PID8 442 aa18.37■□□□□ 0.53
VPS37B-202ENST00000371248 RAB6CQ9H0N0 254 aa18.37■□□□□ 0.53
VPS37B-202ENST00000371248 GOLPH3Q9H4A6 298 aa18.37■□□□□ 0.53
VPS37B-202ENST00000371248 TASP1Q9H6P5 420 aa18.37■□□□□ 0.53
VPS37B-202ENST00000371248 DDIT4Q9NX09 232 aa18.37■□□□□ 0.53
VPS37B-202ENST00000371248 LCMT1Q9UIC8 334 aa18.37■□□□□ 0.53
VPS37B-202ENST00000371248 CAPN6Q9Y6Q1 641 aa18.37■□□□□ 0.53
VPS37B-202ENST00000371248 TRAV19A0A0A6YYK7 116 aa18.36■□□□□ 0.53
VPS37B-202ENST00000371248 MSI1O43347 362 aaKnown RBP18.36■□□□□ 0.53
VPS37B-202ENST00000371248 RNF8O76064 485 aa18.36■□□□□ 0.53
VPS37B-202ENST00000371248 MBL2P11226 248 aaPredicted RBP18.36■□□□□ 0.53
VPS37B-202ENST00000371248 GBP1P32455 592 aa18.36■□□□□ 0.53
VPS37B-202ENST00000371248 DEUP1Q05D60 604 aa18.36■□□□□ 0.53
VPS37B-202ENST00000371248 GET4Q7L5D6 327 aaPredicted RBP18.36■□□□□ 0.53
VPS37B-202ENST00000371248 DAAM2Q86T65 1068 aa18.36■□□□□ 0.53
VPS37B-202ENST00000371248 CENPIQ92674 756 aaPredicted RBP18.36■□□□□ 0.53
VPS37B-202ENST00000371248 HLA-CQ95604 372 aa18.36■□□□□ 0.53
VPS37B-202ENST00000371248 PALMO75781 387 aa18.35■□□□□ 0.53
VPS37B-202ENST00000371248 IGLV3-25P01717 112 aa18.35■□□□□ 0.53
VPS37B-202ENST00000371248 CKMP06732 381 aa18.35■□□□□ 0.53
VPS37B-202ENST00000371248 ATXN1P54253 815 aaKnown RBP18.35■□□□□ 0.53
VPS37B-202ENST00000371248 ACAP1Q15027 740 aa18.35■□□□□ 0.53
VPS37B-202ENST00000371248 POTEHQ6S545 545 aa18.35■□□□□ 0.53
VPS37B-202ENST00000371248 STRADAQ7RTN6 431 aa18.35■□□□□ 0.53
VPS37B-202ENST00000371248 CPNE8Q86YQ8 564 aa18.35■□□□□ 0.53
VPS37B-202ENST00000371248 ARFGAP1Q8N6T3 406 aa18.35■□□□□ 0.53
VPS37B-202ENST00000371248 NIPA2Q8N8Q9 360 aa18.35■□□□□ 0.53
VPS37B-202ENST00000371248 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.35■□□□□ 0.53
VPS37B-202ENST00000371248 ZSWIM3Q96MP5 696 aa18.35■□□□□ 0.53
VPS37B-202ENST00000371248 SERPINB11Q96P15 392 aa18.35■□□□□ 0.53
VPS37B-202ENST00000371248 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.35■□□□□ 0.53
VPS37B-202ENST00000371248 HYOU1Q9Y4L1 999 aa18.35■□□□□ 0.53
VPS37B-202ENST00000371248 DENND4AQ7Z401 1863 aa18.35■□□□□ 0.53
VPS37B-202ENST00000371248 HELZP42694 1942 aaKnown RBP18.35■□□□□ 0.53
VPS37B-202ENST00000371248 DOCK8Q8NF50 2099 aa18.35■□□□□ 0.53
VPS37B-202ENST00000371248 SLC12A8A0AV02 714 aa18.35■□□□□ 0.53
VPS37B-202ENST00000371248 GRID2IPA4D2P6 1211 aa18.35■□□□□ 0.53
VPS37B-202ENST00000371248 ENDOD1O94919 500 aa18.35■□□□□ 0.53
VPS37B-202ENST00000371248 OLFM2O95897 454 aa18.35■□□□□ 0.53
VPS37B-202ENST00000371248 CC2D1AQ6P1N0 951 aaPredicted RBP18.35■□□□□ 0.53
VPS37B-202ENST00000371248 BNIPLQ7Z465 357 aa18.35■□□□□ 0.53
VPS37B-202ENST00000371248 CMTM8Q8IZV2 173 aa18.35■□□□□ 0.53
VPS37B-202ENST00000371248 MYRIPQ8NFW9 859 aa18.35■□□□□ 0.53
VPS37B-202ENST00000371248 PGAP3Q96FM1 320 aaPredicted RBP18.35■□□□□ 0.53
VPS37B-202ENST00000371248 POMKQ9H5K3 350 aa18.35■□□□□ 0.53
VPS37B-202ENST00000371248 PIGVQ9NUD9 493 aa18.35■□□□□ 0.53
VPS37B-202ENST00000371248 USP15Q9Y4E8 981 aaPredicted RBP18.35■□□□□ 0.53
VPS37B-202ENST00000371248 ALG6Q9Y672 507 aa18.35■□□□□ 0.53
VPS37B-202ENST00000371248 SOBPA7XYQ1 873 aa18.34■□□□□ 0.53
VPS37B-202ENST00000371248 IRAK2O43187 625 aa18.34■□□□□ 0.53
VPS37B-202ENST00000371248 LRCH4O75427 683 aa18.34■□□□□ 0.53
VPS37B-202ENST00000371248 F9P00740 461 aa18.34■□□□□ 0.53
VPS37B-202ENST00000371248 HMBSP08397 361 aa18.34■□□□□ 0.53
VPS37B-202ENST00000371248 PFKLP17858 780 aa18.34■□□□□ 0.53
VPS37B-202ENST00000371248 RDXP35241 583 aaKnown RBP18.34■□□□□ 0.53
VPS37B-202ENST00000371248 AVPR1AP37288 418 aa18.34■□□□□ 0.53
VPS37B-202ENST00000371248 HDAC4P56524 1084 aa18.34■□□□□ 0.53
VPS37B-202ENST00000371248 C11orf63Q6NUN7 778 aa18.34■□□□□ 0.53
VPS37B-202ENST00000371248 SCYL2Q6P3W7 929 aa18.34■□□□□ 0.53
VPS37B-202ENST00000371248 FGF13Q92913 245 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms