RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 FBXL13Q8NEE6 735 aa13.83□□□□□ -0.2
RPF1-201ENST00000370654 OR2I1PQ8NGU4 316 aa13.83□□□□□ -0.2
RPF1-201ENST00000370654 KCNV2Q8TDN2 545 aa13.83□□□□□ -0.2
RPF1-201ENST00000370654 CCDC47Q96A33 483 aaKnown RBP13.83□□□□□ -0.2
RPF1-201ENST00000370654 SPACA7Q96KW9 195 aa13.83□□□□□ -0.2
RPF1-201ENST00000370654 XPO6Q96QU8 1125 aaKnown RBP13.83□□□□□ -0.2
RPF1-201ENST00000370654 GABRG3Q99928 467 aa13.83□□□□□ -0.2
RPF1-201ENST00000370654 SCAND2PQ9GZW5 306 aaPredicted RBP13.83□□□□□ -0.2
RPF1-201ENST00000370654 WDR35Q9P2L0 1181 aa13.83□□□□□ -0.2
RPF1-201ENST00000370654 EVLQ9UI08 416 aaPredicted RBP13.83□□□□□ -0.2
RPF1-201ENST00000370654 LSM7Q9UK45 103 aaKnown RBP13.83□□□□□ -0.2
RPF1-201ENST00000370654 CYP8B1Q9UNU6 501 aa13.83□□□□□ -0.2
RPF1-201ENST00000370654 WASF3Q9UPY6 502 aa13.83□□□□□ -0.2
RPF1-201ENST00000370654 CEP192Q8TEP8 1941 aa13.82□□□□□ -0.2
RPF1-201ENST00000370654 GABBR2O75899 941 aa13.82□□□□□ -0.2
RPF1-201ENST00000370654 PENKP01210 267 aaPredicted RBP13.82□□□□□ -0.2
RPF1-201ENST00000370654 CALCAP01258 141 aa13.82□□□□□ -0.2
RPF1-201ENST00000370654 ENGP17813 658 aa13.82□□□□□ -0.2
RPF1-201ENST00000370654 CORO1AP31146 461 aaKnown RBP13.82□□□□□ -0.2
RPF1-201ENST00000370654 RPL6Q02878 288 aaKnown RBP13.82□□□□□ -0.2
RPF1-201ENST00000370654 PEAR1Q5VY43 1037 aaPredicted RBP13.82□□□□□ -0.2
RPF1-201ENST00000370654 LYSMD4Q5XG99 296 aa13.82□□□□□ -0.2
RPF1-201ENST00000370654 ARHGAP17Q68EM7 881 aa13.82□□□□□ -0.2
RPF1-201ENST00000370654 ZC3H3Q8IXZ2 948 aaKnown RBP13.82□□□□□ -0.2
RPF1-201ENST00000370654 ZNF276Q8N554 614 aa13.82□□□□□ -0.2
RPF1-201ENST00000370654 DEFB124Q8NES8 71 aa13.82□□□□□ -0.2
RPF1-201ENST00000370654 MRGPRX1Q96LB2 322 aa13.82□□□□□ -0.2
RPF1-201ENST00000370654 CLIC5Q9NZA1 410 aa13.82□□□□□ -0.2
RPF1-201ENST00000370654 AGO1Q9UL18 857 aaKnown RBP13.82□□□□□ -0.2
RPF1-201ENST00000370654 PI4KAP42356 2102 aa13.81□□□□□ -0.2
RPF1-201ENST00000370654 RALAP11233 206 aa13.81□□□□□ -0.2
RPF1-201ENST00000370654 TKTL1P51854 596 aa13.81□□□□□ -0.2
RPF1-201ENST00000370654 MFAP3P55082 362 aa13.81□□□□□ -0.2
RPF1-201ENST00000370654 PDE4CQ08493 712 aa13.81□□□□□ -0.2
RPF1-201ENST00000370654 GOLGA8FQ08AF8 430 aa13.81□□□□□ -0.2
RPF1-201ENST00000370654 GOLGA8DPQ0D2H9 430 aa13.81□□□□□ -0.2
RPF1-201ENST00000370654 ZNF252P-AS1Q0IIN9 211 aa13.81□□□□□ -0.2
RPF1-201ENST00000370654 LRMPQ12912 555 aa13.81□□□□□ -0.2
RPF1-201ENST00000370654 GOLGA7BQ2TAP0 167 aa13.81□□□□□ -0.2
RPF1-201ENST00000370654 DAB2IPQ5VWQ8 1189 aa13.81□□□□□ -0.2
RPF1-201ENST00000370654 TMEM215Q68D42 235 aa13.81□□□□□ -0.2
RPF1-201ENST00000370654 SLC23A3Q6PIS1 610 aa13.81□□□□□ -0.2
RPF1-201ENST00000370654 TRMT11Q7Z4G4 463 aaKnown RBP13.81□□□□□ -0.2
RPF1-201ENST00000370654 DENND1CQ8IV53 801 aa13.81□□□□□ -0.2
RPF1-201ENST00000370654 UBR7Q8N806 425 aa13.81□□□□□ -0.2
RPF1-201ENST00000370654 ANKRD52Q8NB46 1076 aa13.81□□□□□ -0.2
RPF1-201ENST00000370654 RBBP8NLQ8NC74 664 aaPredicted RBP13.81□□□□□ -0.2
RPF1-201ENST00000370654 ENGASEQ8NFI3 743 aa13.81□□□□□ -0.2
RPF1-201ENST00000370654 UBA3Q8TBC4 463 aa13.81□□□□□ -0.2
RPF1-201ENST00000370654 SORCS1Q8WY21 1168 aa13.81□□□□□ -0.2
RPF1-201ENST00000370654 PIWIL1Q96J94 861 aaKnown RBP13.81□□□□□ -0.2
RPF1-201ENST00000370654 ULBP1Q9BZM6 244 aa13.81□□□□□ -0.2
RPF1-201ENST00000370654 USP24Q9UPU5 2620 aa13.8□□□□□ -0.2
RPF1-201ENST00000370654 PCDH15Q96QU1 1955 aa13.8□□□□□ -0.2
RPF1-201ENST00000370654 SLC12A8A0AV02 714 aa13.8□□□□□ -0.2
RPF1-201ENST00000370654 C1QTNF9BB2RNN3 333 aa13.8□□□□□ -0.2
RPF1-201ENST00000370654 CETN3O15182 167 aa13.8□□□□□ -0.2
RPF1-201ENST00000370654 CFIP05156 583 aa13.8□□□□□ -0.2
RPF1-201ENST00000370654 C1QTNF9P0C862 333 aa13.8□□□□□ -0.2
RPF1-201ENST00000370654 EPB41P11171 864 aaKnown RBP13.8□□□□□ -0.2
RPF1-201ENST00000370654 IL12RB1P42701 662 aa13.8□□□□□ -0.2
RPF1-201ENST00000370654 YWHAGP61981 247 aaKnown RBP eCLIP13.8□□□□□ -0.2
RPF1-201ENST00000370654 ZNF33AQ06730 810 aa13.8□□□□□ -0.2
RPF1-201ENST00000370654 FOXC1Q12948 553 aa13.8□□□□□ -0.2
RPF1-201ENST00000370654 FUT11Q495W5 492 aa13.8□□□□□ -0.2
RPF1-201ENST00000370654 DCAF17Q5H9S7 520 aaPredicted RBP13.8□□□□□ -0.2
RPF1-201ENST00000370654 ISM2Q6H9L7 571 aa13.8□□□□□ -0.2
RPF1-201ENST00000370654 CCDC150Q8NCX0 1101 aa13.8□□□□□ -0.2
RPF1-201ENST00000370654 TFAP2BQ92481 460 aa13.8□□□□□ -0.2
RPF1-201ENST00000370654 ZSWIM1Q9BR11 485 aa13.8□□□□□ -0.2
RPF1-201ENST00000370654 UBXN6Q9BZV1 441 aa13.8□□□□□ -0.2
RPF1-201ENST00000370654 CAPN10Q9HC96 672 aa13.8□□□□□ -0.2
RPF1-201ENST00000370654 MARCH2Q9P0N8 246 aa13.8□□□□□ -0.2
RPF1-201ENST00000370654 SFMBT1Q9UHJ3 866 aa13.8□□□□□ -0.2
RPF1-201ENST00000370654 TSPAN16Q9UKR8 245 aa13.8□□□□□ -0.2
RPF1-201ENST00000370654 COQ4Q9Y3A0 265 aa13.8□□□□□ -0.2
RPF1-201ENST00000370654 STON1Q9Y6Q2 735 aa13.8□□□□□ -0.2
RPF1-201ENST00000370654 FRYQ5TBA9 3013 aa13.8□□□□□ -0.2
RPF1-201ENST00000370654 RNF225M0QZC1 329 aaPredicted RBP13.79□□□□□ -0.2
RPF1-201ENST00000370654 CD44P16070 742 aaKnown RBP13.79□□□□□ -0.2
RPF1-201ENST00000370654 CSRP1P21291 193 aaKnown RBP13.79□□□□□ -0.2
RPF1-201ENST00000370654 MAOBP27338 520 aa13.79□□□□□ -0.2
RPF1-201ENST00000370654 PSEN1P49768 467 aa13.79□□□□□ -0.2
RPF1-201ENST00000370654 FAM193AP78312 1265 aa13.79□□□□□ -0.2
RPF1-201ENST00000370654 CUL2Q13617 745 aa13.79□□□□□ -0.2
RPF1-201ENST00000370654 BYSLQ13895 437 aaKnown RBP13.79□□□□□ -0.2
RPF1-201ENST00000370654 PREPLQ4J6C6 727 aaPredicted RBP13.79□□□□□ -0.2
RPF1-201ENST00000370654 SPDYCQ5MJ68 293 aa13.79□□□□□ -0.2
RPF1-201ENST00000370654 ZNF658Q5TYW1 1059 aaPredicted RBP13.79□□□□□ -0.2
RPF1-201ENST00000370654 TCERG1LQ5VWI1 586 aa13.79□□□□□ -0.2
RPF1-201ENST00000370654 PM20D1Q6GTS8 502 aa13.79□□□□□ -0.2
RPF1-201ENST00000370654 KIAA1324Q6UXG2 1013 aaKnown RBP13.79□□□□□ -0.2
RPF1-201ENST00000370654 TRIML1Q8N9V2 468 aa13.79□□□□□ -0.2
RPF1-201ENST00000370654 SPATA20Q8TB22 786 aa13.79□□□□□ -0.2
RPF1-201ENST00000370654 EDEM1Q92611 657 aa13.79□□□□□ -0.2
RPF1-201ENST00000370654 KAT5Q92993 513 aa13.79□□□□□ -0.2
RPF1-201ENST00000370654 SLC35C1Q96A29 364 aa13.79□□□□□ -0.2
RPF1-201ENST00000370654 HSPA12BQ96MM6 686 aa13.79□□□□□ -0.2
RPF1-201ENST00000370654 TMEM121BQ9BXQ6 578 aaPredicted RBP13.79□□□□□ -0.2
RPF1-201ENST00000370654 NUSAP1Q9BXS6 441 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms